RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Nars2Q8BGV0 477 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Olfr1453Q8VFX0 307 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Wdr20Q9D5R2 567 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Cir1Q9DA19 450 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Rab25Q9WTL2 213 aa12.5□□□□□ -0.41
Nup88-202ENSMUST00000108530 Lrrk2Q5S006 2527 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Kdf1A2A9F4 397 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Slc18a3O35304 530 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Mtatp6P00848 226 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Rasl12Q08AT1 266 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 4933415F23RikQ14BX6 153 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Zfp872Q3UVL3 465 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 PiglQ5SX19 252 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Cxxc4Q6NXI8 198 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Wdr82Q8BFQ4 313 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Bricd5Q8BV89 174 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 LaynQ8C351 381 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Olfr137Q8VFC2 312 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Olfr57Q8VGU7 319 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 St3gal6Q8VIB3 329 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 DohhQ99LN9 302 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 CenpmQ9CQA0 180 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Tmprss2Q9JIQ8 490 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Ccnl2Q9JJA7 518 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Cav2Q9WVC3 162 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Cldn10Q9Z0S6 231 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Ighv6-5A0A0A6YWS9 119 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 LtbP41155 306 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Folr2Q05685 251 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Esp1Q3LHH8 102 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Tmem231Q3U284 315 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Ctf1Q60753 203 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Olfr1000Q7TR99 314 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Sp110Q8BVK9 445 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Vmn1r35Q8R2E2 296 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Tlcd2Q8VC26 310 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Dnajb11Q99KV1 358 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Sytl3Q99N48 607 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 GhsrQ99P50 364 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 SpdefQ9WTP3 325 aa12.49□□□□□ -0.41
Nup88-202ENSMUST00000108530 Gm13547A2ARC0 163 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Gm12789B1AUV7 164 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Olfr554E9Q546 317 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Saa1P05366 122 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Cxcl2P10889 100 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 SlbpP97440 275 aaKnown RBP12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Q3U1D9 316 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 BC147527Q3V185 167 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Ewsr1Q61545 655 aaKnown RBP12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 AgerQ62151 402 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Zc4h2Q68FG0 224 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 MffQ6PCP5 291 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Olfr1283Q7TQY4 305 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Ahsa1Q8BK64 338 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 LmlnQ8BMN4 681 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Scrt2Q8BTH6 311 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Galnt14Q8BVG5 550 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Timm21Q8CCM6 249 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 SbsnQ8CIT9 700 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Katnal1Q8K0T4 488 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Flywch2Q9CQE9 139 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Ndufb7Q9CR61 137 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 DscamQ9ERC8 2013 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Zzef1Q5SSH7 2924 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Ighv5-12A0A075B5Q4 117 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Gm45808A0A1B0GSH8 263 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 StomP54116 284 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Tas2r41P59532 308 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Tubg1P83887 451 aaKnown RBP12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Olfr205Q7TS37 305 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Dtx3Q80V91 347 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Ankrd34cQ8BLB8 534 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Slc17a5Q8BN82 495 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Tmem56Q8CGF5 276 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Spsb4Q8R5B6 273 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Pnpla3Q91WW7 413 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Galnt11Q921L8 608 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Dnttip1Q99LB0 328 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Mrps24Q9CQV5 167 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Egr4Q9WUF2 478 aa12.48□□□□□ -0.41
Nup88-202ENSMUST00000108530 Adgrg4B7ZCC9 3073 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Ldlrad3A2AR95 345 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Olfr1104A2AVB5 310 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Olfr1496B9EHG2 317 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Olfr902E9Q6Z7 309 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Vmn1r80L7N1Z3 308 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 PpicP30412 212 aaKnown RBP12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Zfp7Q3TFZ4 685 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Krt33bQ61897 404 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Olfr1168Q7TR25 312 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 C730034F03RikQ8BGL5 111 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Olfr1466Q8VFW4 310 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Dmbx1Q91ZK4 381 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 RetnlaQ9EP95 111 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 RbmxQ9WV02 391 aaKnown RBP12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Gm5493S4R2D1 92 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Gm3676D3Z236 184 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Nxpe5E0CX47 564 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Lrp3E9Q1T6 790 aa12.47□□□□□ -0.41
Nup88-202ENSMUST00000108530 Gm3573L7N292 184 aa12.47□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 9.1 ms