RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 P06323 132 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Defb33Q30KN3 62 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Olfr1362Q5SZZ8 308 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Hnrnpa3Q8BG05 379 aaKnown RBP9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Wdr4Q9EP82 413 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Gm35315A0A1B0GRI2 571 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Olfr609E9Q4X7 319 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 CtgfP29268 348 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Smim7Q5RKS2 75 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Olfr492Q8VFD1 314 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Asb9Q91ZT8 290 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Ap5s1Q9D742 170 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Rps2-ps6A0A140T8L5 221 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Rhox2fA2ANE0 191 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Sult2a3D3Z1W5 285 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Gpr31F8VQN3 319 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Lgals9O08573 353 aaKnown RBP9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Bmpr1bP36898 502 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Tmem123Q91Z22 195 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Slc48a1Q9D8M3 146 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 D930048N14RikA2AA67 225 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Fam240aJ3QNP9 97 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 B4galt1P15535 399 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Olfr837Q8VFJ4 312 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Cadm3Q99N28 396 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Xrcc2Q9CX47 278 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Sec11cQ9D8V7 192 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Spint2Q9WU03 252 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Arpc1bQ9WV32 372 aaKnown RBP9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Cypt3B1AY64 174 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Rag2P21784 527 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Foxk2Q3UCQ1 651 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 BadQ61337 204 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Ablim3Q69ZX8 682 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 SinhcafQ8C8M1 221 aaKnown RBP9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Ifitm2Q99J93 144 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Ttc32Q9DAC7 148 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Josd1Q9DBJ6 202 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Gm4907B1AXB9 411 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Gm609E9Q573 300 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Gm2aQ60648 193 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Ly6g6eQ8K1T6 166 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Olfr495Q8VF12 330 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Olfr354Q8VGJ8 317 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Dda1Q9D9Z5 102 aa9.2□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Col18a1P39061 1774 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Trav5d-4Q5R1F6 114 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Gpr4Q8BUD0 365 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Susd2Q9DBX3 820 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Adam6aB2RSY5 754 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Cops9Q3U898 57 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Arg1Q61176 323 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Zfhx2Q2MHN3 2562 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Ighv14-2A0A075B5R7 117 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Gm20918J3QN17 227 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Gm5426J3QNM7 103 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 DffbO54788 344 aaKnown RBP9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 ErasQ7TN89 227 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Rep15Q9D7T1 230 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Cml3Q9JIY8 226 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Gstz1Q9WVL0 216 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Hoxd8P23463 289 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Nutf2P61971 127 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Rnf133Q14B02 382 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Lrrn4clQ3TYX2 239 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Olfr1341Q7TQV4 312 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Tmem167bQ80X45 74 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Tctn1Q8BZ64 593 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Myoz1Q9JK37 296 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Fam220aQ3ZN08 260 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Prr11Q8BHE0 368 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Atp6v1fQ9D1K2 119 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Cml1Q9JIZ0 222 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 H2-T3P14432 384 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Nkx2-2P42586 273 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Ighv1-24A0A0A6YY24 117 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Tmem238lA0A1B0GS74 79 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Gm6993A0A1W2P738 69 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 HfeP70387 359 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Olfr1044Q8VGR9 314 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Slc52a3Q9D6X5 460 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Prss46Q5M8S2 314 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Taar5Q5QD14 337 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Mtch2Q791V5 303 aa9.19□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Tial1P70318 392 aaKnown RBP9.18□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Ctf2P83714 204 aa9.18□□□□□ -0.94
Scn9a-201ENSMUST00000100063 NmsQ5H8A1 153 aa9.18□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Ablim2Q8BL65 612 aa9.18□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Olfr1339Q8VGB1 315 aa9.18□□□□□ -0.94
Scn9a-201ENSMUST00000100063 1700025F22RikQ9D9Y7 111 aa9.18□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Dock5B2RY04 1868 aa9.18□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Polr2iP60898 125 aa9.18□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Pebp1P70296 187 aaKnown RBP9.18□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Wfdc5Q4KXB6 126 aa9.18□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Fam206aQ80ZQ9 193 aaKnown RBP9.18□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Ptbp3Q8BHD7 523 aaKnown RBP9.18□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Sdf2Q9DCT5 211 aa9.18□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Fbp1Q9QXD6 338 aa9.18□□□□□ -0.94
Scn9a-201ENSMUST00000100063 Cfap46E9Q2C0 2641 aa9.18□□□□□ -0.94
Scn9a-201ENSMUST00000100063 1700025C18RikA2A580 89 aa9.18□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms