RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 SSR3Q9UNL2 185 aa15.34■□□□□ 0.05
CLN6-222ENST00000637667 PRELID3BQ9Y3B1 194 aa15.34■□□□□ 0.05
CLN6-222ENST00000637667 RRP15Q9Y3B9 282 aaKnown RBP15.34■□□□□ 0.05
CLN6-222ENST00000637667 IGKV1D-13A0A0B4J2D9 117 aa15.33■□□□□ 0.04
CLN6-222ENST00000637667 CREBL2O60519 120 aaPredicted RBP15.33■□□□□ 0.04
CLN6-222ENST00000637667 ACTL6BO94805 426 aa15.33■□□□□ 0.04
CLN6-222ENST00000637667 ATP6V1G2O95670 118 aa15.33■□□□□ 0.04
CLN6-222ENST00000637667 IGKV1-13P0DP09 117 aa15.33■□□□□ 0.04
CLN6-222ENST00000637667 CD36P16671 472 aa15.33■□□□□ 0.04
CLN6-222ENST00000637667 GNG2P59768 71 aa15.33■□□□□ 0.04
CLN6-222ENST00000637667 CDK10Q15131 360 aa15.33■□□□□ 0.04
CLN6-222ENST00000637667 SFXN4Q6P4A7 337 aa15.33■□□□□ 0.04
CLN6-222ENST00000637667 YTHDF1Q9BYJ9 559 aaKnown RBP15.33■□□□□ 0.04
CLN6-222ENST00000637667 ADAM30Q9UKF2 790 aa15.33■□□□□ 0.04
CLN6-222ENST00000637667 MRPS7Q9Y2R9 242 aaKnown RBP15.33■□□□□ 0.04
CLN6-222ENST00000637667 SSX5O60225 188 aa15.32■□□□□ 0.04
CLN6-222ENST00000637667 TUSC2O75896 110 aa15.32■□□□□ 0.04
CLN6-222ENST00000637667 IGHV4-30-4P0DP06 118 aa15.32■□□□□ 0.04
CLN6-222ENST00000637667 RPL30P62888 115 aaKnown RBP15.32■□□□□ 0.04
CLN6-222ENST00000637667 RHOGP84095 191 aa15.32■□□□□ 0.04
CLN6-222ENST00000637667 TATDN3Q17R31 274 aa15.32■□□□□ 0.04
CLN6-222ENST00000637667 RPEL1Q2QD12 228 aa15.32■□□□□ 0.04
CLN6-222ENST00000637667 OR2B11Q5JQS5 317 aa15.32■□□□□ 0.04
CLN6-222ENST00000637667 MMD2Q8IY49 270 aa15.32■□□□□ 0.04
CLN6-222ENST00000637667 MUC7Q8TAX7 377 aa15.32■□□□□ 0.04
CLN6-222ENST00000637667 SNAPC3Q92966 411 aa15.32■□□□□ 0.04
CLN6-222ENST00000637667 SPIN2AQ99865 258 aa15.32■□□□□ 0.04
CLN6-222ENST00000637667 SPIN2BQ9BPZ2 258 aa15.32■□□□□ 0.04
CLN6-222ENST00000637667 OR51E2Q9H255 320 aa15.32■□□□□ 0.04
CLN6-222ENST00000637667 ZMAT4Q9H898 229 aa15.32■□□□□ 0.04
CLN6-222ENST00000637667 RHBDL2Q9NX52 303 aa15.32■□□□□ 0.04
CLN6-222ENST00000637667 FAM223BA6NKX1 122 aa15.31■□□□□ 0.04
CLN6-222ENST00000637667 H0Y980 276 aa15.31■□□□□ 0.04
CLN6-222ENST00000637667 IGLV2-14P01704 120 aa15.31■□□□□ 0.04
CLN6-222ENST00000637667 PRH1P02810 166 aa15.31■□□□□ 0.04
CLN6-222ENST00000637667 SDC2P34741 201 aa15.31■□□□□ 0.04
CLN6-222ENST00000637667 C10orf55Q5SWW7 151 aa15.31■□□□□ 0.04
CLN6-222ENST00000637667 FAM223AQ8IWN6 122 aa15.31■□□□□ 0.04
CLN6-222ENST00000637667 SGPP2Q8IWX5 399 aa15.31■□□□□ 0.04
CLN6-222ENST00000637667 HSD17B10Q99714 261 aaKnown RBP15.31■□□□□ 0.04
CLN6-222ENST00000637667 AKIP1Q9NQ31 210 aa15.31■□□□□ 0.04
CLN6-222ENST00000637667 ANXA10Q9UJ72 324 aa15.31■□□□□ 0.04
CLN6-222ENST00000637667 TRBV9A0A0B4J1U6 114 aa15.3■□□□□ 0.04
CLN6-222ENST00000637667 A8MZ25 164 aa15.3■□□□□ 0.04
CLN6-222ENST00000637667 OR2A4O95047 310 aa15.3■□□□□ 0.04
CLN6-222ENST00000637667 CSN3P07498 182 aa15.3■□□□□ 0.04
CLN6-222ENST00000637667 ZNF45Q02386 682 aa15.3■□□□□ 0.04
CLN6-222ENST00000637667 ATP5G2Q06055 141 aa15.3■□□□□ 0.04
CLN6-222ENST00000637667 EXOSC2Q13868 293 aaKnown RBP15.3■□□□□ 0.04
CLN6-222ENST00000637667 ZNF773Q6PK81 442 aa15.3■□□□□ 0.04
CLN6-222ENST00000637667 OR4S2Q8NH73 311 aa15.3■□□□□ 0.04
CLN6-222ENST00000637667 C19orf73Q9NVV2 129 aa15.3■□□□□ 0.04
CLN6-222ENST00000637667 SIGLEC8Q9NYZ4 499 aa15.3■□□□□ 0.04
CLN6-222ENST00000637667 CLEC2LP0C7M8 214 aa15.29■□□□□ 0.04
CLN6-222ENST00000637667 MXD1Q05195 221 aa15.29■□□□□ 0.04
CLN6-222ENST00000637667 EIF4EBP1Q13541 118 aaPredicted RBP15.29■□□□□ 0.04
CLN6-222ENST00000637667 VKORC1L1Q8N0U8 176 aa15.29■□□□□ 0.04
CLN6-222ENST00000637667 TTC9CQ8N5M4 171 aa15.29■□□□□ 0.04
CLN6-222ENST00000637667 TCTEX1D2Q8WW35 142 aa15.29■□□□□ 0.04
CLN6-222ENST00000637667 TM2D3Q9BRN9 247 aa15.29■□□□□ 0.04
CLN6-222ENST00000637667 SPATA2Q9UM82 520 aa15.29■□□□□ 0.04
CLN6-222ENST00000637667 BMPR1BO00238 502 aa15.28■□□□□ 0.04
CLN6-222ENST00000637667 SCAND1P57086 179 aa15.28■□□□□ 0.04
CLN6-222ENST00000637667 LCN12Q6JVE5 192 aa15.28■□□□□ 0.04
CLN6-222ENST00000637667 SLC25A42Q86VD7 318 aa15.28■□□□□ 0.04
CLN6-222ENST00000637667 NECAP1Q8NC96 275 aa15.28■□□□□ 0.04
CLN6-222ENST00000637667 OR5H6Q8NGV6 325 aa15.28■□□□□ 0.04
CLN6-222ENST00000637667 SLC25A38Q96DW6 304 aa15.28■□□□□ 0.04
CLN6-222ENST00000637667 RNF167Q9H6Y7 350 aa15.28■□□□□ 0.04
CLN6-222ENST00000637667 ETV7Q9Y603 341 aa15.28■□□□□ 0.04
CLN6-222ENST00000637667 DNAH7Q8WXX0 4024 aa15.27■□□□□ 0.04
CLN6-222ENST00000637667 TRAV18A0A075B6X5 111 aa15.27■□□□□ 0.04
CLN6-222ENST00000637667 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.27■□□□□ 0.04
CLN6-222ENST00000637667 BRWD1-AS2P59051 145 aa15.27■□□□□ 0.04
CLN6-222ENST00000637667 CASC10Q5T4H9 136 aa15.27■□□□□ 0.04
CLN6-222ENST00000637667 IDNKQ5T6J7 187 aa15.27■□□□□ 0.04
CLN6-222ENST00000637667 ZNF66Q6ZN08 573 aa15.27■□□□□ 0.04
CLN6-222ENST00000637667 Q8N402 240 aa15.27■□□□□ 0.04
CLN6-222ENST00000637667 MFSD4AQ8N468 514 aa15.27■□□□□ 0.04
CLN6-222ENST00000637667 BEST4Q8NFU0 473 aa15.27■□□□□ 0.04
CLN6-222ENST00000637667 VSTM2AQ8TAG5 236 aa15.27■□□□□ 0.04
CLN6-222ENST00000637667 OR2A7Q96R45 310 aa15.27■□□□□ 0.04
CLN6-222ENST00000637667 THAP7Q9BT49 309 aaPredicted RBP15.27■□□□□ 0.04
CLN6-222ENST00000637667 TAS2R8Q9NYW2 309 aa15.27■□□□□ 0.04
CLN6-222ENST00000637667 PEMTQ9UBM1 199 aa15.27■□□□□ 0.04
CLN6-222ENST00000637667 LOC100506127A0A0U1RQW1 187 aa15.26■□□□□ 0.03
CLN6-222ENST00000637667 HMX3A6NHT5 357 aa15.26■□□□□ 0.03
CLN6-222ENST00000637667 TEX22C9J3V5 150 aa15.26■□□□□ 0.03
CLN6-222ENST00000637667 OR2J3O76001 311 aa15.26■□□□□ 0.03
CLN6-222ENST00000637667 KBTBD11O94819 623 aa15.26■□□□□ 0.03
CLN6-222ENST00000637667 ARPC4P59998 168 aa15.26■□□□□ 0.03
CLN6-222ENST00000637667 PUSL1Q8N0Z8 303 aaKnown RBP15.26■□□□□ 0.03
CLN6-222ENST00000637667 TMEM167AQ8TBQ9 72 aa15.26■□□□□ 0.03
CLN6-222ENST00000637667 CITED4Q96RK1 184 aa15.26■□□□□ 0.03
CLN6-222ENST00000637667 ZNF257Q9Y2Q1 563 aa15.26■□□□□ 0.03
CLN6-222ENST00000637667 AIREO43918 545 aa15.25■□□□□ 0.03
CLN6-222ENST00000637667 IL6RP08887 468 aaPredicted RBP15.25■□□□□ 0.03
CLN6-222ENST00000637667 FCGR2CP31995 323 aa15.25■□□□□ 0.03
CLN6-222ENST00000637667 MAS1LP35410 378 aa15.25■□□□□ 0.03
CLN6-222ENST00000637667 RPL27AP46776 148 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms