RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 LINC01006Q8NI28 216 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 HPSE2Q8WWQ2 592 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 NKX6-2Q9C056 277 aaPredicted RBP3.93□□□□□ -1.78
LINC00550-201ENST00000629293 C11orf1Q9H5F2 150 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 OPA3Q9H6K4 179 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 ZNF286AQ9HBT8 521 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 SLC2A9Q9NRM0 540 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 ST3GAL6Q9Y274 331 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 CMYA5Q8N3K9 4069 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 IGHV3OR15-7A0A075B7D8 119 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 A0A0U1RQK1 487 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 A0A1B0GUS0 222 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 SRRM5B3KS81 715 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 CLDN34H7C241 214 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 TOR1AO14656 332 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 CST4P01036 141 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 GYPAP02724 150 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 CD55P08174 381 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 OR5AC1P0C628 307 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 RCC1P18754 421 aaPredicted RBP3.93□□□□□ -1.78
LINC00550-201ENST00000629293 FUT3P21217 361 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 PAX6P26367 422 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 RPL12P30050 165 aaKnown RBP3.93□□□□□ -1.78
LINC00550-201ENST00000629293 KCNJ3P48549 501 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 SULT1A2P50226 295 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 KRTAP10-3P60369 221 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 EIF5AP63241 154 aaKnown RBP3.93□□□□□ -1.78
LINC00550-201ENST00000629293 IL13RA2Q14627 380 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 MLANAQ16655 118 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 ZNF826PQ6ZT77 177 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 LDLRAD3Q86YD5 345 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 PUSL1Q8N0Z8 303 aaKnown RBP3.93□□□□□ -1.78
LINC00550-201ENST00000629293 OR8G5Q8NG78 346 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 OR5L1Q8NGL2 311 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 LYPD6BQ8NI32 183 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 RTN4IP1Q8WWV3 396 aaPredicted RBP3.93□□□□□ -1.78
LINC00550-201ENST00000629293 KRTAP4-8Q9BYQ9 185 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 GSKIPQ9P0R6 139 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 FBXL17Q9UF56 701 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 SIGLEC9Q9Y336 463 aa3.93□□□□□ -1.78
LINC00550-201ENST00000629293 ZNF850A8MQ14 1090 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 K7EPK0 472 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 GPR31O00270 319 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 MLNRO43193 412 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 NAPSAO96009 420 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 IFNA21P01568 189 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 ADH4P08319 380 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 FCGR2CP31995 323 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 LPAR6P43657 344 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 NPBWR2P48146 333 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 OR8G1Q15617 311 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 LY6EQ16553 131 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 GUCA2BQ16661 112 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 DHRS7BQ6IAN0 325 aaPredicted RBP3.92□□□□□ -1.78
LINC00550-201ENST00000629293 BTNL8Q6UX41 500 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 FGFRL1Q8N441 504 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 FAM71E2Q8N5Q1 922 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 UBAC2Q8NBM4 344 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 OR56B2PQ8NGI1 322 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 GLYATL2Q8WU03 294 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 PIGCQ92535 297 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 TAF9BQ9HBM6 251 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 GAR1Q9NY12 217 aaKnown RBP3.92□□□□□ -1.78
LINC00550-201ENST00000629293 PEMTQ9UBM1 199 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 CENPVL3A0A0U1RRI6 287 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 ZNF705EA8MWA4 302 aaPredicted RBP3.92□□□□□ -1.78
LINC00550-201ENST00000629293 GLAP06280 429 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 KITLGP21583 273 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 AADACP22760 399 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 LMO1P25800 156 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 DUSP1P28562 367 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 PCP4P48539 62 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 CAV2P51636 162 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 RND3P61587 244 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 DEFA5Q01523 94 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 PRDX4Q13162 271 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 CXorf66Q5JRM2 361 aaPredicted RBP3.92□□□□□ -1.78
LINC00550-201ENST00000629293 EIF5AL1Q6IS14 154 aaKnown RBP3.92□□□□□ -1.78
LINC00550-201ENST00000629293 SLC25A26Q70HW3 274 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 MRPL21Q7Z2W9 205 aaKnown RBP3.92□□□□□ -1.78
LINC00550-201ENST00000629293 SVBPQ8N300 66 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 OR4D5Q8NGN0 318 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 H1FXQ92522 213 aaKnown RBP3.92□□□□□ -1.78
LINC00550-201ENST00000629293 TOMM40LQ969M1 308 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 APOBEC3DQ96AK3 386 aaPredicted RBP3.92□□□□□ -1.78
LINC00550-201ENST00000629293 WWC2-AS2Q96NR7 200 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 CITED1Q99966 193 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 NRIP2Q9BQI9 281 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 SEC11CQ9BY50 192 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 PARP11Q9NR21 331 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 E5RGE8 158 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 NUPL2O15504 423 aaKnown RBP3.92□□□□□ -1.78
LINC00550-201ENST00000629293 JTBO76095 146 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 PPYP01298 95 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 CD5P06127 495 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 MUC1P15941 1255 aaPredicted RBP3.92□□□□□ -1.78
LINC00550-201ENST00000629293 BCL3P20749 454 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 CFHR2P36980 270 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 ARHGDIBP52566 201 aa3.92□□□□□ -1.78
LINC00550-201ENST00000629293 SMCO1Q147U7 214 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms