RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 F2RP25116 425 aa11.67□□□□□ -0.54
PNKP-221ENST00000627317 PSG5Q15238 335 aa11.67□□□□□ -0.54
PNKP-221ENST00000627317 VMA21Q3ZAQ7 101 aa11.67□□□□□ -0.54
PNKP-221ENST00000627317 TCTEX1D1Q8N7M0 179 aa11.67□□□□□ -0.54
PNKP-221ENST00000627317 FBXL15Q9H469 300 aa11.67□□□□□ -0.54
PNKP-221ENST00000627317 METTL1Q9UBP6 276 aaKnown RBP11.67□□□□□ -0.54
PNKP-221ENST00000627317 RNF114Q9Y508 228 aa11.67□□□□□ -0.54
PNKP-221ENST00000627317 MPPED1O15442 326 aa11.66□□□□□ -0.54
PNKP-221ENST00000627317 RAMP3O60896 148 aa11.66□□□□□ -0.54
PNKP-221ENST00000627317 UPK1BO75841 260 aa11.66□□□□□ -0.54
PNKP-221ENST00000627317 VDAC2P45880 294 aaPredicted RBP11.66□□□□□ -0.54
PNKP-221ENST00000627317 RBMS2Q15434 407 aaKnown RBP11.66□□□□□ -0.54
PNKP-221ENST00000627317 Q8N2B8 174 aa11.66□□□□□ -0.54
PNKP-221ENST00000627317 SLC25A21Q9BQT8 299 aaPredicted RBP11.66□□□□□ -0.54
PNKP-221ENST00000627317 GPR132Q9UNW8 380 aa11.66□□□□□ -0.54
PNKP-221ENST00000627317 VSIG4Q9Y279 399 aa11.66□□□□□ -0.54
PNKP-221ENST00000627317 SIGLEC9Q9Y336 463 aa11.66□□□□□ -0.54
PNKP-221ENST00000627317 CMYA5Q8N3K9 4069 aa11.66□□□□□ -0.54
PNKP-221ENST00000627317 TEX13DA0A0J9YY54 714 aaPredicted RBP11.65□□□□□ -0.54
PNKP-221ENST00000627317 H0Y980 276 aa11.65□□□□□ -0.54
PNKP-221ENST00000627317 LYRM1O43325 122 aa11.65□□□□□ -0.54
PNKP-221ENST00000627317 HPRT1P00492 218 aa11.65□□□□□ -0.54
PNKP-221ENST00000627317 HRASP01112 189 aa11.65□□□□□ -0.54
PNKP-221ENST00000627317 IGLV2-23P01705 113 aa11.65□□□□□ -0.54
PNKP-221ENST00000627317 HLA-DRB1P01911 266 aa11.65□□□□□ -0.54
PNKP-221ENST00000627317 CCR6P51684 374 aa11.65□□□□□ -0.54
PNKP-221ENST00000627317 BRWD1-AS2P59051 145 aa11.65□□□□□ -0.54
PNKP-221ENST00000627317 UBE2KP61086 200 aa11.65□□□□□ -0.54
PNKP-221ENST00000627317 ERVK-16P61578 105 aa11.65□□□□□ -0.54
PNKP-221ENST00000627317 TMEM95Q3KNT9 176 aa11.65□□□□□ -0.54
PNKP-221ENST00000627317 LIN54Q6MZP7 749 aa11.65□□□□□ -0.54
PNKP-221ENST00000627317 Q6ZS46 218 aa11.65□□□□□ -0.54
PNKP-221ENST00000627317 SLC35E3Q7Z769 313 aa11.65□□□□□ -0.54
PNKP-221ENST00000627317 AIFM2Q9BRQ8 373 aa11.65□□□□□ -0.54
PNKP-221ENST00000627317 RTBDNQ9BSG5 229 aaPredicted RBP11.65□□□□□ -0.54
PNKP-221ENST00000627317 C5orf66Q9H5L9 145 aa11.65□□□□□ -0.54
PNKP-221ENST00000627317 PLEKHA2Q9HB19 425 aa11.65□□□□□ -0.54
PNKP-221ENST00000627317 COMMD9Q9P000 198 aa11.65□□□□□ -0.54
PNKP-221ENST00000627317 SRRM4A7MD48 611 aaKnown RBP11.64□□□□□ -0.55
PNKP-221ENST00000627317 PLA2G10O15496 165 aa11.64□□□□□ -0.55
PNKP-221ENST00000627317 KCNAB3O43448 404 aa11.64□□□□□ -0.55
PNKP-221ENST00000627317 S1PR2O95136 353 aa11.64□□□□□ -0.55
PNKP-221ENST00000627317 SERPINE2P07093 398 aa11.64□□□□□ -0.55
PNKP-221ENST00000627317 SAA1P0DJI8 122 aaPredicted RBP11.64□□□□□ -0.55
PNKP-221ENST00000627317 VSIG10L2P0DP72 767 aa11.64□□□□□ -0.55
PNKP-221ENST00000627317 LPAR6P43657 344 aa11.64□□□□□ -0.55
PNKP-221ENST00000627317 TAS2R31P59538 309 aa11.64□□□□□ -0.55
PNKP-221ENST00000627317 TMED4Q7Z7H5 227 aa11.64□□□□□ -0.55
PNKP-221ENST00000627317 VSTM2AQ8TAG5 236 aa11.64□□□□□ -0.55
PNKP-221ENST00000627317 RHOVQ96L33 236 aa11.64□□□□□ -0.55
PNKP-221ENST00000627317 CLCC1Q96S66 551 aa11.64□□□□□ -0.55
PNKP-221ENST00000627317 HSPB9Q9BQS6 159 aa11.64□□□□□ -0.55
PNKP-221ENST00000627317 NAA60Q9H7X0 242 aa11.64□□□□□ -0.55
PNKP-221ENST00000627317 TPSG1Q9NRR2 321 aa11.64□□□□□ -0.55
PNKP-221ENST00000627317 FAM212BQ9NTI7 297 aaPredicted RBP11.64□□□□□ -0.55
PNKP-221ENST00000627317 C3orf85A0A1B0GTC6 90 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 CRYM-AS1A6NIL9 109 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 CREBL2O60519 120 aaPredicted RBP11.63□□□□□ -0.55
PNKP-221ENST00000627317 B3GALNT1O75752 331 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 NDUFB6O95139 128 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 IGHG2P01859 326 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 NQO2P16083 231 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 BTCP35070 178 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 MZT2BQ6NZ67 158 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 SSX9Q7RTT3 188 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 PPP1R27Q86WC6 154 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 FOXRED2Q8IWF2 684 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 SGPP2Q8IWX5 399 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 VKORC1L1Q8N0U8 176 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 TEX45Q8NA69 505 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 ADAD2Q8NCV1 583 aaKnown RBP11.63□□□□□ -0.55
PNKP-221ENST00000627317 DMBX1Q8NFW5 382 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 ABHD5Q8WTS1 349 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 R3HDM4Q96D70 268 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 TP53RKQ96S44 253 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 TSC22D3Q99576 134 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 PARP11Q9NR21 331 aa11.63□□□□□ -0.55
PNKP-221ENST00000627317 AP4M1O00189 453 aa11.62□□□□□ -0.55
PNKP-221ENST00000627317 CA2P00918 260 aa11.62□□□□□ -0.55
PNKP-221ENST00000627317 AKR1C4P17516 323 aa11.62□□□□□ -0.55
PNKP-221ENST00000627317 GNB1P62873 340 aa11.62□□□□□ -0.55
PNKP-221ENST00000627317 ASAH1Q13510 395 aa11.62□□□□□ -0.55
PNKP-221ENST00000627317 TRIM16LQ309B1 348 aa11.62□□□□□ -0.55
PNKP-221ENST00000627317 ZNF585BQ52M93 769 aa11.62□□□□□ -0.55
PNKP-221ENST00000627317 CENPSQ8N2Z9 138 aa11.62□□□□□ -0.55
PNKP-221ENST00000627317 KLHDC1Q8N7A1 406 aa11.62□□□□□ -0.55
PNKP-221ENST00000627317 SERTAD4Q9NUC0 356 aa11.62□□□□□ -0.55
PNKP-221ENST00000627317 TBC1D24Q9ULP9 559 aa11.62□□□□□ -0.55
PNKP-221ENST00000627317 IGHV7-81A0A0B4J1V7 117 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 MARCH11A6NNE9 402 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 FCN1O00602 326 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 ACTL6BO94805 426 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 KBTBD11O94819 623 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 OR2A4O95047 310 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 CNIH1O95406 144 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 KRASP01116 189 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 CRYGBP07316 175 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 OR5AC1P0C628 307 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 RPA2P15927 270 aa11.61□□□□□ -0.55
PNKP-221ENST00000627317 DEFA1P59665 94 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms