RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 TMEM95Q3KNT9 176 aa15.14■□□□□ 0.01
SQSTM1-216ENST00000626660 FOXRED2Q8IWF2 684 aa15.14■□□□□ 0.01
SQSTM1-216ENST00000626660 C3orf56Q8N813 242 aa15.14■□□□□ 0.01
SQSTM1-216ENST00000626660 C7orf50Q9BRJ6 194 aaKnown RBP15.14■□□□□ 0.01
SQSTM1-216ENST00000626660 SERTAD4Q9NUC0 356 aa15.14■□□□□ 0.01
SQSTM1-216ENST00000626660 MPPED1O15442 326 aa15.13■□□□□ 0.01
SQSTM1-216ENST00000626660 RAMP3O60896 148 aa15.13■□□□□ 0.01
SQSTM1-216ENST00000626660 HPRT1P00492 218 aa15.13■□□□□ 0.01
SQSTM1-216ENST00000626660 VSIG10L2P0DP72 767 aa15.13■□□□□ 0.01
SQSTM1-216ENST00000626660 PROK1P58294 105 aa15.13■□□□□ 0.01
SQSTM1-216ENST00000626660 BRWD1-AS2P59051 145 aa15.13■□□□□ 0.01
SQSTM1-216ENST00000626660 MRGPRFQ96AM1 343 aa15.13■□□□□ 0.01
SQSTM1-216ENST00000626660 SRRM4A7MD48 611 aaKnown RBP15.12■□□□□ 0.01
SQSTM1-216ENST00000626660 AP4M1O00189 453 aa15.12■□□□□ 0.01
SQSTM1-216ENST00000626660 KLHDC1Q8N7A1 406 aa15.12■□□□□ 0.01
SQSTM1-216ENST00000626660 TEX45Q8NA69 505 aa15.12■□□□□ 0.01
SQSTM1-216ENST00000626660 CLCC1Q96S66 551 aa15.12■□□□□ 0.01
SQSTM1-216ENST00000626660 HSPB9Q9BQS6 159 aa15.12■□□□□ 0.01
SQSTM1-216ENST00000626660 PLEKHA2Q9HB19 425 aa15.12■□□□□ 0.01
SQSTM1-216ENST00000626660 FAM212BQ9NTI7 297 aaPredicted RBP15.12■□□□□ 0.01
SQSTM1-216ENST00000626660 COMMD9Q9P000 198 aa15.12■□□□□ 0.01
SQSTM1-216ENST00000626660 GPR132Q9UNW8 380 aa15.12■□□□□ 0.01
SQSTM1-216ENST00000626660 TNCP24821 2201 aa15.12■□□□□ 0.01
SQSTM1-216ENST00000626660 CREBL2O60519 120 aaPredicted RBP15.11■□□□□ 0.01
SQSTM1-216ENST00000626660 SAA1P0DJI8 122 aaPredicted RBP15.11■□□□□ 0.01
SQSTM1-216ENST00000626660 NQO2P16083 231 aa15.11■□□□□ 0.01
SQSTM1-216ENST00000626660 LPAR6P43657 344 aa15.11■□□□□ 0.01
SQSTM1-216ENST00000626660 TAS2R31P59538 309 aa15.11■□□□□ 0.01
SQSTM1-216ENST00000626660 PPP1R27Q86WC6 154 aa15.11■□□□□ 0.01
SQSTM1-216ENST00000626660 VSTM2AQ8TAG5 236 aa15.11■□□□□ 0.01
SQSTM1-216ENST00000626660 WFDC12Q8WWY7 111 aa15.11■□□□□ 0.01
SQSTM1-216ENST00000626660 RHOVQ96L33 236 aa15.11■□□□□ 0.01
SQSTM1-216ENST00000626660 SLC25A21Q9BQT8 299 aaPredicted RBP15.11■□□□□ 0.01
SQSTM1-216ENST00000626660 TEX13DA0A0J9YY54 714 aaPredicted RBP15.1■□□□□ 0.01
SQSTM1-216ENST00000626660 S1PR2O95136 353 aa15.1■□□□□ 0.01
SQSTM1-216ENST00000626660 SERPINE2P07093 398 aa15.1■□□□□ 0.01
SQSTM1-216ENST00000626660 CRYGBP07316 175 aa15.1■□□□□ 0.01
SQSTM1-216ENST00000626660 ERVK-16P61578 105 aa15.1■□□□□ 0.01
SQSTM1-216ENST00000626660 CENPVQ7Z7K6 275 aaPredicted RBP15.1■□□□□ 0.01
SQSTM1-216ENST00000626660 ABHD5Q8WTS1 349 aa15.1■□□□□ 0.01
SQSTM1-216ENST00000626660 CHPT1Q8WUD6 406 aa15.1■□□□□ 0.01
SQSTM1-216ENST00000626660 RTBDNQ9BSG5 229 aaPredicted RBP15.1■□□□□ 0.01
SQSTM1-216ENST00000626660 OR51J1Q9H342 316 aa15.1■□□□□ 0.01
SQSTM1-216ENST00000626660 C5orf66Q9H5L9 145 aa15.1■□□□□ 0.01
SQSTM1-216ENST00000626660 PARP11Q9NR21 331 aa15.1■□□□□ 0.01
SQSTM1-216ENST00000626660 TPSG1Q9NRR2 321 aa15.1■□□□□ 0.01
SQSTM1-216ENST00000626660 IGHV7-81A0A0B4J1V7 117 aa15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 C3orf85A0A1B0GTC6 90 aa15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 H0Y980 276 aa15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 FCN1O00602 326 aa15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 B3GALNT1O75752 331 aa15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 OR2A4O95047 310 aa15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 CNIH1O95406 144 aa15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 CA2P00918 260 aa15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 GNB1P62873 340 aa15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 CX3CL1P78423 397 aa15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 RBMS2Q15434 407 aaKnown RBP15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 ZNF562Q6V9R5 426 aa15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 SSX9Q7RTT3 188 aa15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 VKORC1L1Q8N0U8 176 aa15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 R3HDM4Q96D70 268 aa15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 OR2A7Q96R45 310 aa15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 ZNF747Q9BV97 191 aa15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 GON7Q9BXV9 100 aa15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 WNT10AQ9GZT5 417 aa15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 VSIG4Q9Y279 399 aa15.09■□□□□ 0.01
SQSTM1-216ENST00000626660 TENM1Q9UKZ4 2725 aa15.08■□□□□ 0.01
SQSTM1-216ENST00000626660 LINC01548A6NM66 108 aa15.08■□□□□ 0
SQSTM1-216ENST00000626660 SLC35B1P78383 322 aa15.08■□□□□ 0
SQSTM1-216ENST00000626660 PRSS8Q16651 343 aa15.08■□□□□ 0
SQSTM1-216ENST00000626660 ZNF585BQ52M93 769 aa15.08■□□□□ 0
SQSTM1-216ENST00000626660 MMD2Q8IY49 270 aa15.08■□□□□ 0
SQSTM1-216ENST00000626660 STPG2Q8N412 459 aa15.08■□□□□ 0
SQSTM1-216ENST00000626660 DMBX1Q8NFW5 382 aa15.08■□□□□ 0
SQSTM1-216ENST00000626660 NOL4LQ96MY1 436 aaPredicted RBP15.08■□□□□ 0
SQSTM1-216ENST00000626660 NAA60Q9H7X0 242 aa15.08■□□□□ 0
SQSTM1-216ENST00000626660 PSMB11A5LHX3 300 aa15.07■□□□□ 0
SQSTM1-216ENST00000626660 LYRM1O43325 122 aa15.07■□□□□ 0
SQSTM1-216ENST00000626660 ACTL6BO94805 426 aa15.07■□□□□ 0
SQSTM1-216ENST00000626660 KBTBD11O94819 623 aa15.07■□□□□ 0
SQSTM1-216ENST00000626660 IGF1P05019 195 aa15.07■□□□□ 0
SQSTM1-216ENST00000626660 RPA2P15927 270 aa15.07■□□□□ 0
SQSTM1-216ENST00000626660 VDAC1P21796 283 aa15.07■□□□□ 0
SQSTM1-216ENST00000626660 CCR6P51684 374 aa15.07■□□□□ 0
SQSTM1-216ENST00000626660 PJVKQ0ZLH3 352 aa15.07■□□□□ 0
SQSTM1-216ENST00000626660 FXYD3Q14802 87 aa15.07■□□□□ 0
SQSTM1-216ENST00000626660 POU2AF1Q16633 256 aa15.07■□□□□ 0
SQSTM1-216ENST00000626660 SHISA2Q6UWI4 295 aa15.07■□□□□ 0
SQSTM1-216ENST00000626660 SGPP2Q8IWX5 399 aa15.07■□□□□ 0
SQSTM1-216ENST00000626660 PUSL1Q8N0Z8 303 aaKnown RBP15.07■□□□□ 0
SQSTM1-216ENST00000626660 OR4A5Q8NH83 315 aa15.07■□□□□ 0
SQSTM1-216ENST00000626660 ARPC1AQ92747 370 aa15.07■□□□□ 0
SQSTM1-216ENST00000626660 LINC00527Q9UJ94 153 aa15.07■□□□□ 0
SQSTM1-216ENST00000626660 ZNF580Q9UK33 172 aa15.07■□□□□ 0
SQSTM1-216ENST00000626660 CRYM-AS1A6NIL9 109 aa15.06■□□□□ 0
SQSTM1-216ENST00000626660 MARCH11A6NNE9 402 aa15.06■□□□□ 0
SQSTM1-216ENST00000626660 ATP6V0E1O15342 81 aa15.06■□□□□ 0
SQSTM1-216ENST00000626660 UPK1BO75841 260 aa15.06■□□□□ 0
SQSTM1-216ENST00000626660 AKR1C4P17516 323 aa15.06■□□□□ 0
SQSTM1-216ENST00000626660 TNXAQ16473 311 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms