RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 WT1P19544 449 aaPredicted RBP7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 NPPCP23582 126 aa7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 GALR1P47211 349 aa7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 RAB7AP51149 207 aa7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 LINC00205P59089 165 aa7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 ERVK-16P61578 105 aa7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 RPS16P62249 146 aaKnown RBP7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 EDDM3AQ14507 147 aa7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 GFI1BQ5VTD9 330 aa7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 SEM1Q6ZVN7 128 aa7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 OR4A16Q8NH70 328 aa7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 MEGF10Q96KG7 1140 aa7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 IFI27L2Q9H2X8 130 aa7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 CHODLQ9H9P2 273 aa7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 KCNIP2Q9NS61 270 aa7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 GNG12Q9UBI6 72 aa7.96□□□□□ -1.14
IGHV3-54-201ENST00000622166 ZDBF2Q9HCK1 2354 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 IGLV3-9A0A075B6K5 115 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 PCNX2A6NKB5 2137 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 C11orf94C9JXX5 98 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 HMGB3O15347 200 aaKnown RBP7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 GATCO43716 136 aaKnown RBP7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 GFRA3O60609 400 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 FTH1P19P0C7X4 201 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 HIST1H1BP16401 226 aaKnown RBP7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 GLRXP35754 106 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 GATA4P43694 442 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 POU2AF1Q16633 256 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 C17orf58Q2M2W7 97 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 TMEM30BQ3MIR4 351 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 SPINK9Q5DT21 86 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 TIMM23BQ5SRD1 257 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 TREML4Q6UXN2 200 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 LRP11Q86VZ4 500 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 TMEM183AQ8IXX5 376 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 ZNF383Q8NA42 475 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 OR2T10Q8NGZ9 312 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 RNASEH2CQ8TDP1 164 aaKnown RBP7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 TMEM170AQ8WVE7 144 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 ADTRPQ96IZ2 230 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 BTF3L4Q96K17 158 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 IMMP2LQ96T52 175 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 S1PR3Q99500 378 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 HEYLQ9NQ87 328 aaPredicted RBP7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 CALYQ9NYX4 217 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 DUSP13Q9UII6 198 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 TCF19Q9Y242 345 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 PRUNE2Q8WUY3 3088 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 HCFC1P51610 2035 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 CACNA1GO43497 2377 aa7.95□□□□□ -1.14
IGHV3-54-201ENST00000622166 USF3Q68DE3 2245 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 IGHV3OR15-7A0A075B7D8 119 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 FNDC10F2Z333 226 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 DVL1O14640 695 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 RRHO14718 337 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 IFNA10P01566 189 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 STAG3L2P0CL84 134 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 STAG3L3P0CL85 134 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 THBS3P49746 956 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 PDLIM4P50479 330 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 ZNF83P51522 516 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 ZNF134P52741 427 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 FAM3BP58499 235 aaPredicted RBP7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 GNB1P62873 340 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 LCN2P80188 198 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 HNF4GQ14541 408 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 LTC4SQ16873 150 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 RPL39P5Q59GN2 51 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 FAM209BQ5JX69 171 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 CISD2Q8N5K1 135 aaKnown RBP7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 DEFB124Q8NES8 71 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 OR1P1Q8NH06 330 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 OR4S2Q8NH73 311 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 SDSLQ96GA7 329 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 ACY3Q96HD9 319 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 PFDN5Q99471 154 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 MGST2Q99735 147 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 HIST1H2BLQ99880 126 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 GGTLC1Q9BX51 225 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 LINC00574Q9H8X3 128 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 TMEM140Q9NV12 185 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 GFOD1Q9NXC2 390 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 FOXA2Q9Y261 457 aaPredicted RBP7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 LSM4Q9Y4Z0 139 aaKnown RBP7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 KNTC1P50748 2209 aa7.94□□□□□ -1.14
IGHV3-54-201ENST00000622166 TRAV3A0A0B4J244 114 aa7.93□□□□□ -1.14
IGHV3-54-201ENST00000622166 TRAV20A0A0B4J274 112 aa7.93□□□□□ -1.14
IGHV3-54-201ENST00000622166 KBTBD11-OT1A0A1B0GTJ5 212 aa7.93□□□□□ -1.14
IGHV3-54-201ENST00000622166 A0A1W2PPV4 95 aa7.93□□□□□ -1.14
IGHV3-54-201ENST00000622166 C15orf61A6NNL5 157 aa7.93□□□□□ -1.14
IGHV3-54-201ENST00000622166 PPP5D1E7EU14 171 aa7.93□□□□□ -1.14
IGHV3-54-201ENST00000622166 SLC31A2O15432 143 aa7.93□□□□□ -1.14
IGHV3-54-201ENST00000622166 CXorf1O96002 111 aa7.93□□□□□ -1.14
IGHV3-54-201ENST00000622166 IL6RP08887 468 aaPredicted RBP7.93□□□□□ -1.14
IGHV3-54-201ENST00000622166 EDDM3BP56851 147 aa7.93□□□□□ -1.14
IGHV3-54-201ENST00000622166 KLF3P57682 345 aaPredicted RBP7.93□□□□□ -1.14
IGHV3-54-201ENST00000622166 HSPE1P61604 102 aaKnown RBP7.93□□□□□ -1.14
IGHV3-54-201ENST00000622166 DEFB109BQ30KR1 87 aa7.93□□□□□ -1.14
IGHV3-54-201ENST00000622166 C4orf17Q53FE4 359 aa7.93□□□□□ -1.14
IGHV3-54-201ENST00000622166 SPRNQ5BIV9 151 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms