RNA–Protein interactions for RNA: ENST00000615065.1

PRKN-211, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-211ENST00000615065 TPRA1Q86W33 373 aa11.31□□□□□ -0.6
PRKN-211ENST00000615065 FCGR1BQ92637 280 aa11.31□□□□□ -0.6
PRKN-211ENST00000615065 USMG5Q96IX5 58 aa11.31□□□□□ -0.6
PRKN-211ENST00000615065 DCUN1D5Q9BTE7 237 aa11.31□□□□□ -0.6
PRKN-211ENST00000615065 OR51E2Q9H255 320 aa11.31□□□□□ -0.6
PRKN-211ENST00000615065 DCSTAMPQ9H295 470 aa11.31□□□□□ -0.6
PRKN-211ENST00000615065 SSR3Q9UNL2 185 aa11.31□□□□□ -0.6
PRKN-211ENST00000615065 RBMX2Q9Y388 322 aaKnown RBP11.31□□□□□ -0.6
PRKN-211ENST00000615065 C3orf84H3BNL1 204 aa11.3□□□□□ -0.6
PRKN-211ENST00000615065 CTXN2P0C2S0 81 aa11.3□□□□□ -0.6
PRKN-211ENST00000615065 CLEC2LP0C7M8 214 aa11.3□□□□□ -0.6
PRKN-211ENST00000615065 SDC2P34741 201 aa11.3□□□□□ -0.6
PRKN-211ENST00000615065 RHOGP84095 191 aa11.3□□□□□ -0.6
PRKN-211ENST00000615065 ZNF45Q02386 682 aa11.3□□□□□ -0.6
PRKN-211ENST00000615065 CDK10Q15131 360 aa11.3□□□□□ -0.6
PRKN-211ENST00000615065 CNIH2Q6PI25 160 aa11.3□□□□□ -0.6
PRKN-211ENST00000615065 VKORC1L1Q8N0U8 176 aa11.3□□□□□ -0.6
PRKN-211ENST00000615065 RNF167Q9H6Y7 350 aa11.3□□□□□ -0.6
PRKN-211ENST00000615065 AKIP1Q9NQ31 210 aa11.3□□□□□ -0.6
PRKN-211ENST00000615065 RHBDL2Q9NX52 303 aa11.3□□□□□ -0.6
PRKN-211ENST00000615065 PRELID3BQ9Y3B1 194 aa11.3□□□□□ -0.6
PRKN-211ENST00000615065 HUWE1Q7Z6Z7 4374 aaKnown RBP11.29□□□□□ -0.6
PRKN-211ENST00000615065 SCGNO76038 276 aa11.29□□□□□ -0.6
PRKN-211ENST00000615065 ACTL6BO94805 426 aa11.29□□□□□ -0.6
PRKN-211ENST00000615065 CSN3P07498 182 aa11.29□□□□□ -0.6
PRKN-211ENST00000615065 CD36P16671 472 aa11.29□□□□□ -0.6
PRKN-211ENST00000615065 MXD1Q05195 221 aa11.29□□□□□ -0.6
PRKN-211ENST00000615065 EIF4EBP1Q13541 118 aaPredicted RBP11.29□□□□□ -0.6
PRKN-211ENST00000615065 EXOSC2Q13868 293 aaKnown RBP11.29□□□□□ -0.6
PRKN-211ENST00000615065 RPEL1Q2QD12 228 aa11.29□□□□□ -0.6
PRKN-211ENST00000615065 MUC7Q8TAX7 377 aa11.29□□□□□ -0.6
PRKN-211ENST00000615065 SLC25A38Q96DW6 304 aa11.29□□□□□ -0.6
PRKN-211ENST00000615065 Q9H521 79 aa11.29□□□□□ -0.6
PRKN-211ENST00000615065 ZMAT4Q9H898 229 aa11.29□□□□□ -0.6
PRKN-211ENST00000615065 ANXA10Q9UJ72 324 aa11.29□□□□□ -0.6
PRKN-211ENST00000615065 MRPS7Q9Y2R9 242 aaKnown RBP11.29□□□□□ -0.6
PRKN-211ENST00000615065 TRBV9A0A0B4J1U6 114 aa11.28□□□□□ -0.6
PRKN-211ENST00000615065 BMPR1BO00238 502 aa11.28□□□□□ -0.6
PRKN-211ENST00000615065 CREBL2O60519 120 aaPredicted RBP11.28□□□□□ -0.6
PRKN-211ENST00000615065 SLC22A5O76082 557 aa11.28□□□□□ -0.6
PRKN-211ENST00000615065 ZNF773Q6PK81 442 aa11.28□□□□□ -0.6
PRKN-211ENST00000615065 SGPP2Q8IWX5 399 aa11.28□□□□□ -0.6
PRKN-211ENST00000615065 MMD2Q8IY49 270 aa11.28□□□□□ -0.6
PRKN-211ENST00000615065 OR5H6Q8NGV6 325 aa11.28□□□□□ -0.6
PRKN-211ENST00000615065 TCTEX1D2Q8WW35 142 aa11.28□□□□□ -0.6
PRKN-211ENST00000615065 SNAPC3Q92966 411 aa11.28□□□□□ -0.6
PRKN-211ENST00000615065 GPHA2Q96T91 129 aa11.28□□□□□ -0.6
PRKN-211ENST00000615065 SPIN2AQ99865 258 aa11.28□□□□□ -0.6
PRKN-211ENST00000615065 SPIN2BQ9BPZ2 258 aa11.28□□□□□ -0.6
PRKN-211ENST00000615065 YTHDF1Q9BYJ9 559 aaKnown RBP11.28□□□□□ -0.6
PRKN-211ENST00000615065 C19orf73Q9NVV2 129 aa11.28□□□□□ -0.6
PRKN-211ENST00000615065 SPATA2Q9UM82 520 aa11.28□□□□□ -0.6
PRKN-211ENST00000615065 RYR3Q15413 4870 aa11.27□□□□□ -0.6
PRKN-211ENST00000615065 LOC100506127A0A0U1RQW1 187 aa11.27□□□□□ -0.61
PRKN-211ENST00000615065 IZUMO1RA6ND01 250 aa11.27□□□□□ -0.61
PRKN-211ENST00000615065 HMX3A6NHT5 357 aa11.27□□□□□ -0.61
PRKN-211ENST00000615065 FAM223BA6NKX1 122 aa11.27□□□□□ -0.61
PRKN-211ENST00000615065 OR2A4O95047 310 aa11.27□□□□□ -0.61
PRKN-211ENST00000615065 PTHLHP12272 177 aa11.27□□□□□ -0.61
PRKN-211ENST00000615065 BRWD1-AS2P59051 145 aa11.27□□□□□ -0.61
PRKN-211ENST00000615065 ATP5G2Q06055 141 aa11.27□□□□□ -0.61
PRKN-211ENST00000615065 C19orf35Q6ZS72 473 aa11.27□□□□□ -0.61
PRKN-211ENST00000615065 FAM223AQ8IWN6 122 aa11.27□□□□□ -0.61
PRKN-211ENST00000615065 TTC9CQ8N5M4 171 aa11.27□□□□□ -0.61
PRKN-211ENST00000615065 GVQW1Q8N7I0 195 aa11.27□□□□□ -0.61
PRKN-211ENST00000615065 OR4S2Q8NH73 311 aa11.27□□□□□ -0.61
PRKN-211ENST00000615065 HSD17B10Q99714 261 aaKnown RBP11.27□□□□□ -0.61
PRKN-211ENST00000615065 TM2D3Q9BRN9 247 aa11.27□□□□□ -0.61
PRKN-211ENST00000615065 TAS2R8Q9NYW2 309 aa11.27□□□□□ -0.61
PRKN-211ENST00000615065 TRAV18A0A075B6X5 111 aa11.26□□□□□ -0.61
PRKN-211ENST00000615065 A8MZ25 164 aa11.26□□□□□ -0.61
PRKN-211ENST00000615065 TEX22C9J3V5 150 aa11.26□□□□□ -0.61
PRKN-211ENST00000615065 H0Y980 276 aa11.26□□□□□ -0.61
PRKN-211ENST00000615065 KBTBD11O94819 623 aa11.26□□□□□ -0.61
PRKN-211ENST00000615065 TATDN3Q17R31 274 aa11.26□□□□□ -0.61
PRKN-211ENST00000615065 CASC10Q5T4H9 136 aa11.26□□□□□ -0.61
PRKN-211ENST00000615065 IDNKQ5T6J7 187 aa11.26□□□□□ -0.61
PRKN-211ENST00000615065 MFSD4AQ8N468 514 aa11.26□□□□□ -0.61
PRKN-211ENST00000615065 BEST4Q8NFU0 473 aa11.26□□□□□ -0.61
PRKN-211ENST00000615065 THAP7Q9BT49 309 aaPredicted RBP11.26□□□□□ -0.61
PRKN-211ENST00000615065 SIGLEC8Q9NYZ4 499 aa11.26□□□□□ -0.61
PRKN-211ENST00000615065 ETV7Q9Y603 341 aa11.26□□□□□ -0.61
PRKN-211ENST00000615065 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.25□□□□□ -0.61
PRKN-211ENST00000615065 A0A1B0GW64 132 aa11.25□□□□□ -0.61
PRKN-211ENST00000615065 E7EUB6 86 aa11.25□□□□□ -0.61
PRKN-211ENST00000615065 TNFSF12O43508 249 aa11.25□□□□□ -0.61
PRKN-211ENST00000615065 OR2J3O76001 311 aa11.25□□□□□ -0.61
PRKN-211ENST00000615065 IL6RP08887 468 aaPredicted RBP11.25□□□□□ -0.61
PRKN-211ENST00000615065 SCAND1P57086 179 aa11.25□□□□□ -0.61
PRKN-211ENST00000615065 ARPC4P59998 168 aa11.25□□□□□ -0.61
PRKN-211ENST00000615065 NEDD8Q15843 81 aa11.25□□□□□ -0.61
PRKN-211ENST00000615065 C15orf32Q32M92 178 aa11.25□□□□□ -0.61
PRKN-211ENST00000615065 LCN12Q6JVE5 192 aa11.25□□□□□ -0.61
PRKN-211ENST00000615065 SSX9Q7RTT3 188 aa11.25□□□□□ -0.61
PRKN-211ENST00000615065 PUSL1Q8N0Z8 303 aaKnown RBP11.25□□□□□ -0.61
PRKN-211ENST00000615065 NECAP1Q8NC96 275 aa11.25□□□□□ -0.61
PRKN-211ENST00000615065 SECTM1Q8WVN6 248 aa11.25□□□□□ -0.61
PRKN-211ENST00000615065 OR2A7Q96R45 310 aa11.25□□□□□ -0.61
PRKN-211ENST00000615065 ZNF257Q9Y2Q1 563 aa11.25□□□□□ -0.61
PRKN-211ENST00000615065 DNAH7Q8WXX0 4024 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms