RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 KRTAP3-3Q9BYR6 98 aa9.98□□□□□ -0.81
CBWD1-220ENST00000612045 KRTAP3-2Q9BYR7 98 aa9.98□□□□□ -0.81
CBWD1-220ENST00000612045 UNKLQ9H9P5 680 aaKnown RBP9.98□□□□□ -0.81
CBWD1-220ENST00000612045 LYRM2Q9NU23 88 aaPredicted RBP9.98□□□□□ -0.81
CBWD1-220ENST00000612045 TMEM140Q9NV12 185 aa9.98□□□□□ -0.81
CBWD1-220ENST00000612045 HSPB7Q9UBY9 170 aa9.98□□□□□ -0.81
CBWD1-220ENST00000612045 AMMECR1Q9Y4X0 333 aaPredicted RBP9.98□□□□□ -0.81
CBWD1-220ENST00000612045 ANKRD17O75179 2603 aaKnown RBP9.98□□□□□ -0.81
CBWD1-220ENST00000612045 WNK2Q9Y3S1 2297 aa9.98□□□□□ -0.81
CBWD1-220ENST00000612045 ABCA12Q86UK0 2595 aa9.98□□□□□ -0.81
CBWD1-220ENST00000612045 H7C2Y5 167 aa9.98□□□□□ -0.81
CBWD1-220ENST00000612045 RBMXL2O75526 392 aaKnown RBP9.98□□□□□ -0.81
CBWD1-220ENST00000612045 HRASP01112 189 aa9.98□□□□□ -0.81
CBWD1-220ENST00000612045 CAV2P51636 162 aa9.98□□□□□ -0.81
CBWD1-220ENST00000612045 PAX9P55771 341 aa9.98□□□□□ -0.81
CBWD1-220ENST00000612045 DSCR9P59020 149 aa9.98□□□□□ -0.81
CBWD1-220ENST00000612045 UBE2KP61086 200 aa9.98□□□□□ -0.81
CBWD1-220ENST00000612045 TNFRSF9Q07011 255 aa9.98□□□□□ -0.81
CBWD1-220ENST00000612045 POU2AF1Q16633 256 aa9.98□□□□□ -0.81
CBWD1-220ENST00000612045 VMO1Q7Z5L0 202 aa9.98□□□□□ -0.81
CBWD1-220ENST00000612045 ZNF471Q9BX82 626 aaPredicted RBP9.98□□□□□ -0.81
CBWD1-220ENST00000612045 POLR3KQ9Y2Y1 108 aaPredicted RBP9.98□□□□□ -0.81
CBWD1-220ENST00000612045 FAM24AA6NFZ4 105 aa9.97□□□□□ -0.81
CBWD1-220ENST00000612045 SRRM4A7MD48 611 aaKnown RBP9.97□□□□□ -0.81
CBWD1-220ENST00000612045 FAM157AC9JC47 383 aa9.97□□□□□ -0.81
CBWD1-220ENST00000612045 LY6LH3BQJ8 138 aa9.97□□□□□ -0.81
CBWD1-220ENST00000612045 SPDEFO95238 335 aa9.97□□□□□ -0.81
CBWD1-220ENST00000612045 IFNA7P01567 189 aa9.97□□□□□ -0.81
CBWD1-220ENST00000612045 ARG1P05089 322 aa9.97□□□□□ -0.81
CBWD1-220ENST00000612045 UBA52P62987 128 aaKnown RBP9.97□□□□□ -0.81
CBWD1-220ENST00000612045 KLRD1Q13241 179 aa9.97□□□□□ -0.81
CBWD1-220ENST00000612045 EXOSC2Q13868 293 aaKnown RBP9.97□□□□□ -0.81
CBWD1-220ENST00000612045 AARDQ4LEZ3 155 aa9.97□□□□□ -0.81
CBWD1-220ENST00000612045 OR4A47Q6IF82 309 aa9.97□□□□□ -0.81
CBWD1-220ENST00000612045 HCP5Q6MZN7 132 aa9.97□□□□□ -0.81
CBWD1-220ENST00000612045 PDPNQ86YL7 162 aa9.97□□□□□ -0.81
CBWD1-220ENST00000612045 OR4A16Q8NH70 328 aa9.97□□□□□ -0.81
CBWD1-220ENST00000612045 OSR1Q8TAX0 266 aaPredicted RBP9.97□□□□□ -0.81
CBWD1-220ENST00000612045 ST8SIA2Q92186 375 aa9.97□□□□□ -0.81
CBWD1-220ENST00000612045 MARVELD3Q96A59 401 aa9.97□□□□□ -0.81
CBWD1-220ENST00000612045 PSMG3-AS1Q96PY0 264 aa9.97□□□□□ -0.81
CBWD1-220ENST00000612045 SIRPDQ9H106 197 aa9.97□□□□□ -0.81
CBWD1-220ENST00000612045 CYTL1Q9NRR1 136 aa9.97□□□□□ -0.81
CBWD1-220ENST00000612045 CSMD1Q96PZ7 3565 aa9.97□□□□□ -0.81
CBWD1-220ENST00000612045 TRAV3A0A0B4J244 114 aa9.96□□□□□ -0.81
CBWD1-220ENST00000612045 IGSF23A1L1A6 192 aa9.96□□□□□ -0.81
CBWD1-220ENST00000612045 ODF3BA8MYP8 253 aa9.96□□□□□ -0.81
CBWD1-220ENST00000612045 TAAR5O14804 337 aa9.96□□□□□ -0.81
CBWD1-220ENST00000612045 SHOXO15266 292 aa9.96□□□□□ -0.81
CBWD1-220ENST00000612045 GAPDHP04406 335 aaKnown RBP9.96□□□□□ -0.81
CBWD1-220ENST00000612045 IAPPP10997 89 aa9.96□□□□□ -0.81
CBWD1-220ENST00000612045 MC5RP33032 325 aa9.96□□□□□ -0.81
CBWD1-220ENST00000612045 OR2B8PP59922 312 aa9.96□□□□□ -0.81
CBWD1-220ENST00000612045 RPL23AP62750 156 aaKnown RBP9.96□□□□□ -0.81
CBWD1-220ENST00000612045 RELBQ01201 579 aa9.96□□□□□ -0.81
CBWD1-220ENST00000612045 EWSR1Q01844 656 aaKnown RBP eCLIP9.96□□□□□ -0.81
CBWD1-220ENST00000612045 TMEM177Q53S58 311 aa9.96□□□□□ -0.81
CBWD1-220ENST00000612045 CLEC9AQ6UXN8 241 aa9.96□□□□□ -0.81
CBWD1-220ENST00000612045 OR4C13Q8NGP0 309 aa9.96□□□□□ -0.81
CBWD1-220ENST00000612045 LHX4Q969G2 390 aa9.96□□□□□ -0.81
CBWD1-220ENST00000612045 FLYWCH2Q96CP2 140 aaKnown RBP9.96□□□□□ -0.81
CBWD1-220ENST00000612045 AIFM2Q9BRQ8 373 aa9.96□□□□□ -0.81
CBWD1-220ENST00000612045 QTRT1Q9BXR0 403 aaKnown RBP9.96□□□□□ -0.81
CBWD1-220ENST00000612045 RBKSQ9H477 322 aa9.96□□□□□ -0.81
CBWD1-220ENST00000612045 FBXL17Q9UF56 701 aa9.96□□□□□ -0.81
CBWD1-220ENST00000612045 WASHC3Q9Y3C0 194 aa9.96□□□□□ -0.81
CBWD1-220ENST00000612045 WSB1Q9Y6I7 421 aa9.96□□□□□ -0.81
CBWD1-220ENST00000612045 IGHV1-3A0A0C4DH29 117 aa9.96□□□□□ -0.82
CBWD1-220ENST00000612045 TXNL1O43396 289 aa9.96□□□□□ -0.82
CBWD1-220ENST00000612045 MED6O75586 246 aa9.96□□□□□ -0.82
CBWD1-220ENST00000612045 HOXB4P17483 251 aaPredicted RBP9.96□□□□□ -0.82
CBWD1-220ENST00000612045 HTR1DP28221 377 aa9.96□□□□□ -0.82
CBWD1-220ENST00000612045 RAB13P51153 203 aa9.96□□□□□ -0.82
CBWD1-220ENST00000612045 DVL1P1P54792 670 aaPredicted RBP9.96□□□□□ -0.82
CBWD1-220ENST00000612045 NHLH2Q02577 135 aa9.96□□□□□ -0.82
CBWD1-220ENST00000612045 CLEC12BQ2HXU8 276 aa9.96□□□□□ -0.82
CBWD1-220ENST00000612045 LDLRAD2Q5SZI1 272 aa9.96□□□□□ -0.82
CBWD1-220ENST00000612045 TMEM252Q8N6L7 170 aa9.96□□□□□ -0.82
CBWD1-220ENST00000612045 RPEQ96AT9 228 aa9.96□□□□□ -0.82
CBWD1-220ENST00000612045 BSCL2Q96G97 398 aaPredicted RBP9.96□□□□□ -0.82
CBWD1-220ENST00000612045 SMIM8Q96KF7 97 aa9.96□□□□□ -0.82
CBWD1-220ENST00000612045 HARBI1Q96MB7 349 aa9.96□□□□□ -0.82
CBWD1-220ENST00000612045 SLC25A31Q9H0C2 315 aa9.96□□□□□ -0.82
CBWD1-220ENST00000612045 LPAR2Q9HBW0 351 aa9.96□□□□□ -0.82
CBWD1-220ENST00000612045 UBQLN2Q9UHD9 624 aa9.96□□□□□ -0.82
CBWD1-220ENST00000612045 INSIG2Q9Y5U4 225 aa9.96□□□□□ -0.82
CBWD1-220ENST00000612045 ABCA2Q9BZC7 2435 aa9.95□□□□□ -0.82
CBWD1-220ENST00000612045 APCP25054 2843 aa9.95□□□□□ -0.82
CBWD1-220ENST00000612045 LEUTXA8MZ59 168 aa9.95□□□□□ -0.82
CBWD1-220ENST00000612045 RNASEK-C17orf49H0YIS7 233 aa9.95□□□□□ -0.82
CBWD1-220ENST00000612045 H3BP45 60 aa9.95□□□□□ -0.82
CBWD1-220ENST00000612045 TOX4O94842 621 aa9.95□□□□□ -0.82
CBWD1-220ENST00000612045 IL6RP08887 468 aaPredicted RBP9.95□□□□□ -0.82
CBWD1-220ENST00000612045 TAS2R30P59541 319 aa9.95□□□□□ -0.82
CBWD1-220ENST00000612045 PDZD9Q8IXQ8 264 aa9.95□□□□□ -0.82
CBWD1-220ENST00000612045 OR52E5Q8NH55 327 aa9.95□□□□□ -0.82
CBWD1-220ENST00000612045 STOML3Q8TAV4 291 aa9.95□□□□□ -0.82
CBWD1-220ENST00000612045 SMIM3Q9BZL3 60 aa9.95□□□□□ -0.82
CBWD1-220ENST00000612045 PSENENQ9NZ42 101 aa9.95□□□□□ -0.82
CBWD1-220ENST00000612045 DPM3Q9P2X0 92 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms