RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 ELK1P19419 428 aa10.53□□□□□ -0.72
CTSA-218ENST00000607814 LGALS7P47929 136 aa10.53□□□□□ -0.72
CTSA-218ENST00000607814 BRWD1-AS2P59051 145 aa10.53□□□□□ -0.72
CTSA-218ENST00000607814 CTF1Q16619 201 aa10.53□□□□□ -0.72
CTSA-218ENST00000607814 ASPHD1Q5U4P2 390 aa10.53□□□□□ -0.72
CTSA-218ENST00000607814 KCTD9Q7L273 389 aa10.53□□□□□ -0.72
CTSA-218ENST00000607814 SNX29P2Q8IUI4 249 aa10.53□□□□□ -0.72
CTSA-218ENST00000607814 OR5M8Q8NGP6 311 aa10.53□□□□□ -0.72
CTSA-218ENST00000607814 OR1N2Q8NGR9 330 aa10.53□□□□□ -0.72
CTSA-218ENST00000607814 MYOZ3Q8TDC0 251 aa10.53□□□□□ -0.72
CTSA-218ENST00000607814 C4orf3Q8WVX3 66 aa10.53□□□□□ -0.72
CTSA-218ENST00000607814 TCTEX1D2Q8WW35 142 aa10.53□□□□□ -0.72
CTSA-218ENST00000607814 PRR25Q96S07 402 aa10.53□□□□□ -0.72
CTSA-218ENST00000607814 IFT46Q9NQC8 304 aa10.53□□□□□ -0.72
CTSA-218ENST00000607814 VSIG4Q9Y279 399 aa10.53□□□□□ -0.72
CTSA-218ENST00000607814 I3L521 148 aa10.52□□□□□ -0.73
CTSA-218ENST00000607814 SPDEFO95238 335 aa10.52□□□□□ -0.73
CTSA-218ENST00000607814 PPYP01298 95 aa10.52□□□□□ -0.73
CTSA-218ENST00000607814 SAA1P0DJI8 122 aaPredicted RBP10.52□□□□□ -0.73
CTSA-218ENST00000607814 HLA-DMAP28067 261 aa10.52□□□□□ -0.73
CTSA-218ENST00000607814 RORCP51449 518 aa10.52□□□□□ -0.73
CTSA-218ENST00000607814 TPPP2P59282 170 aa10.52□□□□□ -0.73
CTSA-218ENST00000607814 TMEM267Q0VDI3 215 aaPredicted RBP10.52□□□□□ -0.73
CTSA-218ENST00000607814 CBX3Q13185 183 aa10.52□□□□□ -0.73
CTSA-218ENST00000607814 EIF4EBP1Q13541 118 aaPredicted RBP10.52□□□□□ -0.73
CTSA-218ENST00000607814 CDK10Q15131 360 aa10.52□□□□□ -0.73
CTSA-218ENST00000607814 TNXAQ16473 311 aa10.52□□□□□ -0.73
CTSA-218ENST00000607814 TMEM17Q86X19 198 aa10.52□□□□□ -0.73
CTSA-218ENST00000607814 ANKRD13BQ86YJ7 626 aa10.52□□□□□ -0.73
CTSA-218ENST00000607814 MFSD4AQ8N468 514 aa10.52□□□□□ -0.73
CTSA-218ENST00000607814 ADTRPQ96IZ2 230 aa10.52□□□□□ -0.73
CTSA-218ENST00000607814 UBE2E2Q96LR5 201 aa10.52□□□□□ -0.73
CTSA-218ENST00000607814 MRPS26Q9BYN8 205 aaKnown RBP10.52□□□□□ -0.73
CTSA-218ENST00000607814 SLC5A7Q9GZV3 580 aa10.52□□□□□ -0.73
CTSA-218ENST00000607814 ZNF580Q9UK33 172 aa10.52□□□□□ -0.73
CTSA-218ENST00000607814 ZNF256Q9Y2P7 627 aaPredicted RBP10.52□□□□□ -0.73
CTSA-218ENST00000607814 SMAD5-AS1Q9Y6J3 95 aa10.52□□□□□ -0.73
CTSA-218ENST00000607814 MSGN1A6NI15 193 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 FAM25AB3EWG3 89 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 FAM25CB3EWG5 89 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 FAM25GB3EWG6 89 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 GABARAPO95166 117 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 RRASP10301 218 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 MYOD1P15172 320 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 PRSS3P35030 304 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 ECI1P42126 302 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 ALDH3B2P48448 385 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 CRIP2P52943 208 aaPredicted RBP10.51□□□□□ -0.73
CTSA-218ENST00000607814 SLURP1P55000 103 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 AKIRIN2Q53H80 203 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 C10orf55Q5SWW7 151 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 SSX9Q7RTT3 188 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 GPR141Q7Z602 305 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 LYSMD2Q8IV50 215 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 OR5AP2Q8NGF4 316 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 ACOT12Q8WYK0 555 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 PHB2Q99623 299 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 EHFQ9NZC4 300 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 TNCP24821 2201 aa10.51□□□□□ -0.73
CTSA-218ENST00000607814 IGHV4OR15-8A0A075B7B6 117 aa10.5□□□□□ -0.73
CTSA-218ENST00000607814 A0A087WW49 117 aa10.5□□□□□ -0.73
CTSA-218ENST00000607814 SULT1C2O00338 296 aa10.5□□□□□ -0.73
CTSA-218ENST00000607814 TMEM127O75204 238 aa10.5□□□□□ -0.73
CTSA-218ENST00000607814 PRH1P02810 166 aa10.5□□□□□ -0.73
CTSA-218ENST00000607814 TRGV3P03979 118 aa10.5□□□□□ -0.73
CTSA-218ENST00000607814 RPA2P15927 270 aa10.5□□□□□ -0.73
CTSA-218ENST00000607814 CBX5P45973 191 aa10.5□□□□□ -0.73
CTSA-218ENST00000607814 UBE2KP61086 200 aa10.5□□□□□ -0.73
CTSA-218ENST00000607814 SPCS2Q15005 226 aa10.5□□□□□ -0.73
CTSA-218ENST00000607814 PRSS8Q16651 343 aa10.5□□□□□ -0.73
CTSA-218ENST00000607814 VMA21Q3ZAQ7 101 aa10.5□□□□□ -0.73
CTSA-218ENST00000607814 ZNF818PQ6ZRF7 136 aa10.5□□□□□ -0.73
CTSA-218ENST00000607814 C19orf35Q6ZS72 473 aa10.5□□□□□ -0.73
CTSA-218ENST00000607814 KCTD12Q96CX2 325 aaKnown RBP10.5□□□□□ -0.73
CTSA-218ENST00000607814 CITED4Q96RK1 184 aa10.5□□□□□ -0.73
CTSA-218ENST00000607814 ZNF2Q9BSG1 426 aaPredicted RBP10.5□□□□□ -0.73
CTSA-218ENST00000607814 ZNF430Q9H8G1 570 aaPredicted RBP10.5□□□□□ -0.73
CTSA-218ENST00000607814 SCOCQ9UIL1 159 aa10.5□□□□□ -0.73
CTSA-218ENST00000607814 PRELID3BQ9Y3B1 194 aa10.5□□□□□ -0.73
CTSA-218ENST00000607814 HYDINQ4G0P3 5121 aa10.49□□□□□ -0.73
CTSA-218ENST00000607814 SMIM31A0A1B0GVY4 71 aa10.49□□□□□ -0.73
CTSA-218ENST00000607814 ANKRD34BA5PLL1 514 aa10.49□□□□□ -0.73
CTSA-218ENST00000607814 SEC14L6B5MCN3 397 aa10.49□□□□□ -0.73
CTSA-218ENST00000607814 RBMXL2O75526 392 aaKnown RBP10.49□□□□□ -0.73
CTSA-218ENST00000607814 INSL3P51460 131 aa10.49□□□□□ -0.73
CTSA-218ENST00000607814 ZNF616Q08AN1 781 aa10.49□□□□□ -0.73
CTSA-218ENST00000607814 FHL3Q13643 280 aa10.49□□□□□ -0.73
CTSA-218ENST00000607814 CLVS1Q8IUQ0 354 aaPredicted RBP10.49□□□□□ -0.73
CTSA-218ENST00000607814 SBSPONQ8IVN8 264 aa10.49□□□□□ -0.73
CTSA-218ENST00000607814 TEX45Q8NA69 505 aa10.49□□□□□ -0.73
CTSA-218ENST00000607814 OR51H1Q8NH63 302 aa10.49□□□□□ -0.73
CTSA-218ENST00000607814 OSR1Q8TAX0 266 aaPredicted RBP10.49□□□□□ -0.73
CTSA-218ENST00000607814 GIMAP1Q8WWP7 306 aa10.49□□□□□ -0.73
CTSA-218ENST00000607814 DCUN1D4Q92564 292 aa10.49□□□□□ -0.73
CTSA-218ENST00000607814 DLX4Q92988 240 aaPredicted RBP10.49□□□□□ -0.73
CTSA-218ENST00000607814 HSD17B10Q99714 261 aaKnown RBP10.49□□□□□ -0.73
CTSA-218ENST00000607814 ZMAT4Q9H898 229 aa10.49□□□□□ -0.73
CTSA-218ENST00000607814 GAR1Q9NY12 217 aaKnown RBP10.49□□□□□ -0.73
CTSA-218ENST00000607814 HMX3A6NHT5 357 aa10.48□□□□□ -0.73
CTSA-218ENST00000607814 E7EUB6 86 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms