RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 RHOGP84095 191 aa12.92□□□□□ -0.34
SCAF1-204ENST00000601038 CDK10Q15131 360 aa12.92□□□□□ -0.34
SCAF1-204ENST00000601038 HACD4Q5VWC8 232 aa12.92□□□□□ -0.34
SCAF1-204ENST00000601038 GTSCR1Q86UQ5 136 aa12.92□□□□□ -0.34
SCAF1-204ENST00000601038 MMD2Q8IY49 270 aa12.92□□□□□ -0.34
SCAF1-204ENST00000601038 Q8N402 240 aa12.92□□□□□ -0.34
SCAF1-204ENST00000601038 TTC9CQ8N5M4 171 aa12.92□□□□□ -0.34
SCAF1-204ENST00000601038 SPIN2AQ99865 258 aa12.92□□□□□ -0.34
SCAF1-204ENST00000601038 SPIN2BQ9BPZ2 258 aa12.92□□□□□ -0.34
SCAF1-204ENST00000601038 DCUN1D5Q9BTE7 237 aa12.92□□□□□ -0.34
SCAF1-204ENST00000601038 DCSTAMPQ9H295 470 aa12.92□□□□□ -0.34
SCAF1-204ENST00000601038 EDA2RQ9HAV5 297 aa12.92□□□□□ -0.34
SCAF1-204ENST00000601038 AKIP1Q9NQ31 210 aa12.92□□□□□ -0.34
SCAF1-204ENST00000601038 PEMTQ9UBM1 199 aa12.92□□□□□ -0.34
SCAF1-204ENST00000601038 PRELID3BQ9Y3B1 194 aa12.92□□□□□ -0.34
SCAF1-204ENST00000601038 NOTOA8MTQ0 251 aa12.91□□□□□ -0.34
SCAF1-204ENST00000601038 J3QRK9 145 aa12.91□□□□□ -0.34
SCAF1-204ENST00000601038 AIREO43918 545 aa12.91□□□□□ -0.34
SCAF1-204ENST00000601038 MRPS14O60783 128 aaKnown RBP12.91□□□□□ -0.34
SCAF1-204ENST00000601038 FCGR3BO75015 233 aa12.91□□□□□ -0.34
SCAF1-204ENST00000601038 ATP5G2Q06055 141 aa12.91□□□□□ -0.34
SCAF1-204ENST00000601038 HAGHQ16775 308 aa12.91□□□□□ -0.34
SCAF1-204ENST00000601038 ISOC1Q96CN7 298 aa12.91□□□□□ -0.34
SCAF1-204ENST00000601038 SPATA25Q9BR10 227 aa12.91□□□□□ -0.34
SCAF1-204ENST00000601038 RBMX2Q9Y388 322 aaKnown RBP12.91□□□□□ -0.34
SCAF1-204ENST00000601038 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.9□□□□□ -0.34
SCAF1-204ENST00000601038 SMIM30A4D0T7 59 aa12.9□□□□□ -0.34
SCAF1-204ENST00000601038 BMPR1BO00238 502 aa12.9□□□□□ -0.34
SCAF1-204ENST00000601038 PRH1P02810 166 aa12.9□□□□□ -0.34
SCAF1-204ENST00000601038 CD36P16671 472 aa12.9□□□□□ -0.34
SCAF1-204ENST00000601038 NFYAP23511 347 aaPredicted RBP12.9□□□□□ -0.34
SCAF1-204ENST00000601038 FGF9P31371 208 aaPredicted RBP12.9□□□□□ -0.34
SCAF1-204ENST00000601038 GABARAPL2P60520 117 aa12.9□□□□□ -0.34
SCAF1-204ENST00000601038 ZNF45Q02386 682 aa12.9□□□□□ -0.34
SCAF1-204ENST00000601038 EXOSC2Q13868 293 aaKnown RBP12.9□□□□□ -0.34
SCAF1-204ENST00000601038 CNIH2Q6PI25 160 aa12.9□□□□□ -0.34
SCAF1-204ENST00000601038 KCTD9Q7L273 389 aa12.9□□□□□ -0.34
SCAF1-204ENST00000601038 NECAP1Q8NC96 275 aa12.9□□□□□ -0.34
SCAF1-204ENST00000601038 OR2K2Q8NGT1 345 aa12.9□□□□□ -0.34
SCAF1-204ENST00000601038 TUBA4BQ9H853 241 aa12.9□□□□□ -0.34
SCAF1-204ENST00000601038 RAB26Q9ULW5 256 aa12.9□□□□□ -0.34
SCAF1-204ENST00000601038 MRPS7Q9Y2R9 242 aaKnown RBP12.9□□□□□ -0.34
SCAF1-204ENST00000601038 IZUMO1RA6ND01 250 aa12.89□□□□□ -0.35
SCAF1-204ENST00000601038 TUSC2O75896 110 aa12.89□□□□□ -0.35
SCAF1-204ENST00000601038 SCGNO76038 276 aa12.89□□□□□ -0.35
SCAF1-204ENST00000601038 IGLV2-14P01704 120 aa12.89□□□□□ -0.35
SCAF1-204ENST00000601038 RPL30P62888 115 aaKnown RBP12.89□□□□□ -0.35
SCAF1-204ENST00000601038 FAM209BQ5JX69 171 aa12.89□□□□□ -0.35
SCAF1-204ENST00000601038 C10orf55Q5SWW7 151 aa12.89□□□□□ -0.35
SCAF1-204ENST00000601038 UBE2UQ5VVX9 321 aa12.89□□□□□ -0.35
SCAF1-204ENST00000601038 SLC25A42Q86VD7 318 aa12.89□□□□□ -0.35
SCAF1-204ENST00000601038 TPRA1Q86W33 373 aa12.89□□□□□ -0.35
SCAF1-204ENST00000601038 HSD17B10Q99714 261 aaKnown RBP12.89□□□□□ -0.35
SCAF1-204ENST00000601038 OR51E2Q9H255 320 aa12.89□□□□□ -0.35
SCAF1-204ENST00000601038 TXNL4BQ9NX01 149 aaKnown RBP12.89□□□□□ -0.35
SCAF1-204ENST00000601038 IGKV1D-13A0A0B4J2D9 117 aa12.88□□□□□ -0.35
SCAF1-204ENST00000601038 TMEM235A6NFC5 223 aa12.88□□□□□ -0.35
SCAF1-204ENST00000601038 IGKV1-13P0DP09 117 aa12.88□□□□□ -0.35
SCAF1-204ENST00000601038 OR2B11Q5JQS5 317 aa12.88□□□□□ -0.35
SCAF1-204ENST00000601038 ZFAND6Q6FIF0 208 aa12.88□□□□□ -0.35
SCAF1-204ENST00000601038 VSTM2AQ8TAG5 236 aa12.88□□□□□ -0.35
SCAF1-204ENST00000601038 NUDCD2Q8WVJ2 157 aa12.88□□□□□ -0.35
SCAF1-204ENST00000601038 KCTD12Q96CX2 325 aaKnown RBP12.88□□□□□ -0.35
SCAF1-204ENST00000601038 ZNF257Q9Y2Q1 563 aa12.88□□□□□ -0.35
SCAF1-204ENST00000601038 TENM2Q9NT68 2774 aa12.88□□□□□ -0.35
SCAF1-204ENST00000601038 LCE6AA0A183 80 aa12.87□□□□□ -0.35
SCAF1-204ENST00000601038 GNG2P59768 71 aa12.87□□□□□ -0.35
SCAF1-204ENST00000601038 EIF4EBP1Q13541 118 aaPredicted RBP12.87□□□□□ -0.35
SCAF1-204ENST00000601038 C15orf32Q32M92 178 aa12.87□□□□□ -0.35
SCAF1-204ENST00000601038 ADAMTSL5Q6ZMM2 481 aa12.87□□□□□ -0.35
SCAF1-204ENST00000601038 LAX1Q8IWV1 398 aa12.87□□□□□ -0.35
SCAF1-204ENST00000601038 VKORC1L1Q8N0U8 176 aa12.87□□□□□ -0.35
SCAF1-204ENST00000601038 SPARTQ8N0X7 666 aa12.87□□□□□ -0.35
SCAF1-204ENST00000601038 OR4S2Q8NH73 311 aa12.87□□□□□ -0.35
SCAF1-204ENST00000601038 OR2A7Q96R45 310 aa12.87□□□□□ -0.35
SCAF1-204ENST00000601038 DAPK2Q9UIK4 370 aa12.87□□□□□ -0.35
SCAF1-204ENST00000601038 ANXA10Q9UJ72 324 aa12.87□□□□□ -0.35
SCAF1-204ENST00000601038 HMX3A6NHT5 357 aa12.86□□□□□ -0.35
SCAF1-204ENST00000601038 TEX22C9J3V5 150 aa12.86□□□□□ -0.35
SCAF1-204ENST00000601038 SSX5O60225 188 aa12.86□□□□□ -0.35
SCAF1-204ENST00000601038 OR2J3O76001 311 aa12.86□□□□□ -0.35
SCAF1-204ENST00000601038 KBTBD11O94819 623 aa12.86□□□□□ -0.35
SCAF1-204ENST00000601038 IFNA6P05013 189 aa12.86□□□□□ -0.35
SCAF1-204ENST00000601038 PSMB9P28065 219 aa12.86□□□□□ -0.35
SCAF1-204ENST00000601038 MAS1LP35410 378 aa12.86□□□□□ -0.35
SCAF1-204ENST00000601038 BRWD1-AS2P59051 145 aa12.86□□□□□ -0.35
SCAF1-204ENST00000601038 CD300EQ496F6 205 aaPredicted RBP12.86□□□□□ -0.35
SCAF1-204ENST00000601038 PUSL1Q8N0Z8 303 aaKnown RBP12.86□□□□□ -0.35
SCAF1-204ENST00000601038 MFSD4AQ8N468 514 aa12.86□□□□□ -0.35
SCAF1-204ENST00000601038 TMEM167AQ8TBQ9 72 aa12.86□□□□□ -0.35
SCAF1-204ENST00000601038 TCTEX1D2Q8WW35 142 aa12.86□□□□□ -0.35
SCAF1-204ENST00000601038 FCGR1BQ92637 280 aa12.86□□□□□ -0.35
SCAF1-204ENST00000601038 SLC2A9Q9NRM0 540 aa12.86□□□□□ -0.35
SCAF1-204ENST00000601038 SPATA2Q9UM82 520 aa12.86□□□□□ -0.35
SCAF1-204ENST00000601038 RRP15Q9Y3B9 282 aaKnown RBP12.86□□□□□ -0.35
SCAF1-204ENST00000601038 DMRT1Q9Y5R6 373 aa12.86□□□□□ -0.35
SCAF1-204ENST00000601038 ZNF785A8K8V0 405 aa12.85□□□□□ -0.35
SCAF1-204ENST00000601038 NPIPB5A8MRT5 1133 aa12.85□□□□□ -0.35
SCAF1-204ENST00000601038 IL6RP08887 468 aaPredicted RBP12.85□□□□□ -0.35
SCAF1-204ENST00000601038 RPL27AP46776 148 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms