RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 RLN1P04808 185 aa10.86□□□□□ -0.67
SNRPA-208ENST00000600456 ECI1P42126 302 aa10.86□□□□□ -0.67
SNRPA-208ENST00000600456 AP3S2P59780 193 aa10.86□□□□□ -0.67
SNRPA-208ENST00000600456 CFHR3Q02985 330 aa10.86□□□□□ -0.67
SNRPA-208ENST00000600456 ZNF79Q15937 498 aa10.86□□□□□ -0.67
SNRPA-208ENST00000600456 TCTEX1D4Q5JR98 221 aa10.86□□□□□ -0.67
SNRPA-208ENST00000600456 TEX38Q6PEX7 206 aa10.86□□□□□ -0.67
SNRPA-208ENST00000600456 ZNF329Q86UD4 541 aa10.86□□□□□ -0.67
SNRPA-208ENST00000600456 OR4C16Q8NGL9 310 aa10.86□□□□□ -0.67
SNRPA-208ENST00000600456 OR51H1Q8NH63 302 aa10.86□□□□□ -0.67
SNRPA-208ENST00000600456 DEDD2Q8WXF8 326 aa10.86□□□□□ -0.67
SNRPA-208ENST00000600456 ARPC1AQ92747 370 aa10.86□□□□□ -0.67
SNRPA-208ENST00000600456 CLCC1Q96S66 551 aa10.86□□□□□ -0.67
SNRPA-208ENST00000600456 PRRT1Q99946 306 aa10.86□□□□□ -0.67
SNRPA-208ENST00000600456 CITED2Q99967 270 aaPredicted RBP10.86□□□□□ -0.67
SNRPA-208ENST00000600456 PLEKHA2Q9HB19 425 aa10.86□□□□□ -0.67
SNRPA-208ENST00000600456 BATF3Q9NR55 127 aa10.86□□□□□ -0.67
SNRPA-208ENST00000600456 TPSG1Q9NRR2 321 aa10.86□□□□□ -0.67
SNRPA-208ENST00000600456 FAM212BQ9NTI7 297 aaPredicted RBP10.86□□□□□ -0.67
SNRPA-208ENST00000600456 TRAV41A0A0B4J266 112 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 TCRBV4S1A1TA0A5B7 111 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 RAMP3O60896 148 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 HPRT1P00492 218 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 IGHG4P01861 327 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 ELANEP08246 267 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 ZNF735P0CB33 412 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 SAA1P0DJI8 122 aaPredicted RBP10.85□□□□□ -0.67
SNRPA-208ENST00000600456 PGAM2P15259 253 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 F2RP25116 425 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 FAUP35544 74 aaKnown RBP10.85□□□□□ -0.67
SNRPA-208ENST00000600456 TAS2R31P59538 309 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 RND3P61587 244 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 NDPQ00604 133 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 TMEM267Q0VDI3 215 aaPredicted RBP10.85□□□□□ -0.67
SNRPA-208ENST00000600456 FOXE3Q13461 319 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 FXYD3Q14802 87 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 SURF2Q15527 256 aaPredicted RBP10.85□□□□□ -0.67
SNRPA-208ENST00000600456 PRSS8Q16651 343 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 SCGB2B2Q4G0G5 96 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 C10orf99Q6UWK7 81 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 LINC00299Q6ZSB3 139 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 ZFAND1Q8TCF1 268 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 TRIM63Q969Q1 353 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 RHOVQ96L33 236 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 SLC2A9Q9NRM0 540 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 SLC2A8Q9NY64 477 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 COMMD9Q9P000 198 aa10.85□□□□□ -0.67
SNRPA-208ENST00000600456 TSSC4Q9Y5U2 329 aaPredicted RBP10.85□□□□□ -0.67
SNRPA-208ENST00000600456 OR2A4O95047 310 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 CNIH1O95406 144 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 NQO2P16083 231 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 PPIFP30405 207 aaKnown RBP10.84□□□□□ -0.67
SNRPA-208ENST00000600456 PJVKQ0ZLH3 352 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 POU2AF1Q16633 256 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 PHLDA2Q53GA4 152 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 AKIRIN2Q53H80 203 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 C19orf54Q5BKX5 351 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 MMD2Q8IY49 270 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 PUSL1Q8N0Z8 303 aaKnown RBP10.84□□□□□ -0.67
SNRPA-208ENST00000600456 TOMM5Q8N4H5 51 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 RNF152Q8N8N0 203 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 GDPD1Q8N9F7 314 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 MINDY2Q8NBR6 621 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 OR4A5Q8NH83 315 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 ABHD5Q8WTS1 349 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 OR2A7Q96R45 310 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 SRRQ9GZT4 340 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 ZFP57Q9NU63 452 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 SCP2D1Q9UJQ7 156 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 NUBP2Q9Y5Y2 271 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 WSB1Q9Y6I7 421 aa10.84□□□□□ -0.67
SNRPA-208ENST00000600456 ADARB2-AS1A8MUL3 147 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 G3V318 75 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 ACTL6BO94805 426 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 KBTBD11O94819 623 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 CTSDP07339 412 aaPredicted RBP10.83□□□□□ -0.68
SNRPA-208ENST00000600456 FGF2P09038 288 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 EGR2P11161 476 aaPredicted RBP10.83□□□□□ -0.68
SNRPA-208ENST00000600456 SLC6A1P30531 599 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 PPP5CP53041 499 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 GNB1P62873 340 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 SSBP2P81877 361 aaPredicted RBP10.83□□□□□ -0.68
SNRPA-208ENST00000600456 ZNF45Q02386 682 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 KLF9Q13886 244 aaPredicted RBP10.83□□□□□ -0.68
SNRPA-208ENST00000600456 MRGPRG-AS1Q2M3A8 158 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 CXorf66Q5JRM2 361 aaPredicted RBP10.83□□□□□ -0.68
SNRPA-208ENST00000600456 FAAP20Q6NZ36 180 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 IDO2Q6ZQW0 420 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 TBC1D26Q86UD7 250 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 VKORC1L1Q8N0U8 176 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 CCDC71LQ8N9Z2 235 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 OR13C8Q8NGS7 320 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 TMEM167AQ8TBQ9 72 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 TMEM68Q96MH6 324 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 ZNF430Q9H8G1 570 aaPredicted RBP10.83□□□□□ -0.68
SNRPA-208ENST00000600456 BET1LQ9NYM9 111 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 FOXA2Q9Y261 457 aaPredicted RBP10.83□□□□□ -0.68
SNRPA-208ENST00000600456 FBXO7Q9Y3I1 522 aa10.83□□□□□ -0.68
SNRPA-208ENST00000600456 ARPC1BO15143 372 aaKnown RBP10.82□□□□□ -0.68
SNRPA-208ENST00000600456 MPPED1O15442 326 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms