RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 ANKRD13BQ86YJ7 626 aa12.11□□□□□ -0.47
VRK3-221ENST00000600284 ADAD2Q8NCV1 583 aaKnown RBP12.11□□□□□ -0.47
VRK3-221ENST00000600284 SPIN2AQ99865 258 aa12.11□□□□□ -0.47
VRK3-221ENST00000600284 SPIN2BQ9BPZ2 258 aa12.11□□□□□ -0.47
VRK3-221ENST00000600284 DCUN1D5Q9BTE7 237 aa12.11□□□□□ -0.47
VRK3-221ENST00000600284 TENM3Q9P273 2699 aa12.1□□□□□ -0.47
VRK3-221ENST00000600284 ANKRD34BA5PLL1 514 aa12.1□□□□□ -0.47
VRK3-221ENST00000600284 FAM223BA6NKX1 122 aa12.1□□□□□ -0.47
VRK3-221ENST00000600284 MPPED1O15442 326 aa12.1□□□□□ -0.47
VRK3-221ENST00000600284 MXD1Q05195 221 aa12.1□□□□□ -0.47
VRK3-221ENST00000600284 MSMO1Q15800 293 aa12.1□□□□□ -0.47
VRK3-221ENST00000600284 KCTD21Q4G0X4 260 aa12.1□□□□□ -0.47
VRK3-221ENST00000600284 ZNF66Q6ZN08 573 aa12.1□□□□□ -0.47
VRK3-221ENST00000600284 SLC25A42Q86VD7 318 aa12.1□□□□□ -0.47
VRK3-221ENST00000600284 FAM223AQ8IWN6 122 aa12.1□□□□□ -0.47
VRK3-221ENST00000600284 TTC9CQ8N5M4 171 aa12.1□□□□□ -0.47
VRK3-221ENST00000600284 OR4S2Q8NH73 311 aa12.1□□□□□ -0.47
VRK3-221ENST00000600284 VSTM2AQ8TAG5 236 aa12.1□□□□□ -0.47
VRK3-221ENST00000600284 ACOT12Q8WYK0 555 aa12.1□□□□□ -0.47
VRK3-221ENST00000600284 ZNF430Q9H8G1 570 aaPredicted RBP12.1□□□□□ -0.47
VRK3-221ENST00000600284 TRAV18A0A075B6X5 111 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 TRBV9A0A0B4J1U6 114 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 IGKV1D-13A0A0B4J2D9 117 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 LOC100506127A0A0U1RQW1 187 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 CLEC2LP0C7M8 214 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 IGKV1-13P0DP09 117 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 RPL30P62888 115 aaKnown RBP12.09□□□□□ -0.47
VRK3-221ENST00000600284 EIF4EBP1Q13541 118 aaPredicted RBP12.09□□□□□ -0.47
VRK3-221ENST00000600284 FAM209BQ5JX69 171 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 IDNKQ5T6J7 187 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 HOGA1Q86XE5 327 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 SBSPONQ8IVN8 264 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 MFSD4AQ8N468 514 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 BEST4Q8NFU0 473 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 OR9G4Q8NGQ1 327 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 OR5H6Q8NGV6 325 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 SNAPC3Q92966 411 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 SLC25A38Q96DW6 304 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 RNF167Q9H6Y7 350 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 DIABLOQ9NR28 239 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 SIGLEC8Q9NYZ4 499 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 SPATA2Q9UM82 520 aa12.09□□□□□ -0.47
VRK3-221ENST00000600284 H0Y980 276 aa12.08□□□□□ -0.48
VRK3-221ENST00000600284 OR2A4O95047 310 aa12.08□□□□□ -0.48
VRK3-221ENST00000600284 APELAP0DMC3 54 aa12.08□□□□□ -0.48
VRK3-221ENST00000600284 MAS1LP35410 378 aa12.08□□□□□ -0.48
VRK3-221ENST00000600284 KIR2DS2P43631 304 aa12.08□□□□□ -0.48
VRK3-221ENST00000600284 ARPC4P59998 168 aa12.08□□□□□ -0.48
VRK3-221ENST00000600284 NEDD8Q15843 81 aa12.08□□□□□ -0.48
VRK3-221ENST00000600284 TIMM50Q3ZCQ8 353 aa12.08□□□□□ -0.48
VRK3-221ENST00000600284 IL34Q6ZMJ4 242 aa12.08□□□□□ -0.48
VRK3-221ENST00000600284 CROCCP3Q8IVE0 287 aa12.08□□□□□ -0.48
VRK3-221ENST00000600284 ZBTB34Q8NCN2 500 aa12.08□□□□□ -0.48
VRK3-221ENST00000600284 TCTEX1D2Q8WW35 142 aa12.08□□□□□ -0.48
VRK3-221ENST00000600284 OR2A7Q96R45 310 aa12.08□□□□□ -0.48
VRK3-221ENST00000600284 RSRP1Q9BUV0 290 aa12.08□□□□□ -0.48
VRK3-221ENST00000600284 TNCP24821 2201 aa12.07□□□□□ -0.48
VRK3-221ENST00000600284 TRIM64CA6NLI5 447 aa12.07□□□□□ -0.48
VRK3-221ENST00000600284 A8MZ25 164 aa12.07□□□□□ -0.48
VRK3-221ENST00000600284 KBTBD11O94819 623 aa12.07□□□□□ -0.48
VRK3-221ENST00000600284 FRMD6-AS1P0C7T7 363 aa12.07□□□□□ -0.48
VRK3-221ENST00000600284 CBX5P45973 191 aa12.07□□□□□ -0.48
VRK3-221ENST00000600284 SYNJ2BPP57105 145 aa12.07□□□□□ -0.48
VRK3-221ENST00000600284 RHOGP84095 191 aa12.07□□□□□ -0.48
VRK3-221ENST00000600284 ATP5G2Q06055 141 aa12.07□□□□□ -0.48
VRK3-221ENST00000600284 RPEL1Q2QD12 228 aa12.07□□□□□ -0.48
VRK3-221ENST00000600284 PUSL1Q8N0Z8 303 aaKnown RBP12.07□□□□□ -0.48
VRK3-221ENST00000600284 NECAP1Q8NC96 275 aa12.07□□□□□ -0.48
VRK3-221ENST00000600284 TMEM167AQ8TBQ9 72 aa12.07□□□□□ -0.48
VRK3-221ENST00000600284 AIFM2Q9BRQ8 373 aa12.07□□□□□ -0.48
VRK3-221ENST00000600284 AUNIPQ9H7T9 357 aa12.07□□□□□ -0.48
VRK3-221ENST00000600284 AKIP1Q9NQ31 210 aa12.07□□□□□ -0.48
VRK3-221ENST00000600284 C3orf84H3BNL1 204 aa12.06□□□□□ -0.48
VRK3-221ENST00000600284 AIREO43918 545 aa12.06□□□□□ -0.48
VRK3-221ENST00000600284 RBMXL2O75526 392 aaKnown RBP12.06□□□□□ -0.48
VRK3-221ENST00000600284 HRASP01112 189 aa12.06□□□□□ -0.48
VRK3-221ENST00000600284 FCGR2CP31995 323 aa12.06□□□□□ -0.48
VRK3-221ENST00000600284 BRWD1-AS2P59051 145 aa12.06□□□□□ -0.48
VRK3-221ENST00000600284 ZNF45Q02386 682 aa12.06□□□□□ -0.48
VRK3-221ENST00000600284 OR2B11Q5JQS5 317 aa12.06□□□□□ -0.48
VRK3-221ENST00000600284 Q8N1Y9 231 aa12.06□□□□□ -0.48
VRK3-221ENST00000600284 GVQW1Q8N7I0 195 aa12.06□□□□□ -0.48
VRK3-221ENST00000600284 ZMAT4Q9H898 229 aa12.06□□□□□ -0.48
VRK3-221ENST00000600284 PEMTQ9UBM1 199 aa12.06□□□□□ -0.48
VRK3-221ENST00000600284 ZNF257Q9Y2Q1 563 aa12.06□□□□□ -0.48
VRK3-221ENST00000600284 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.05□□□□□ -0.48
VRK3-221ENST00000600284 NPIPB5A8MRT5 1133 aa12.05□□□□□ -0.48
VRK3-221ENST00000600284 PPYP01298 95 aa12.05□□□□□ -0.48
VRK3-221ENST00000600284 TRBV12-3P01733 135 aa12.05□□□□□ -0.48
VRK3-221ENST00000600284 CSN3P07498 182 aa12.05□□□□□ -0.48
VRK3-221ENST00000600284 DEFA5Q01523 94 aa12.05□□□□□ -0.48
VRK3-221ENST00000600284 HAPLN4Q86UW8 402 aa12.05□□□□□ -0.48
VRK3-221ENST00000600284 SGPP2Q8IWX5 399 aa12.05□□□□□ -0.48
VRK3-221ENST00000600284 VKORC1L1Q8N0U8 176 aa12.05□□□□□ -0.48
VRK3-221ENST00000600284 OR5AP2Q8NGF4 316 aa12.05□□□□□ -0.48
VRK3-221ENST00000600284 GIMAP1Q8WWP7 306 aa12.05□□□□□ -0.48
VRK3-221ENST00000600284 RCHY1Q96PM5 261 aa12.05□□□□□ -0.48
VRK3-221ENST00000600284 CCL28Q9NRJ3 127 aa12.05□□□□□ -0.48
VRK3-221ENST00000600284 SLC2A9Q9NRM0 540 aa12.05□□□□□ -0.48
VRK3-221ENST00000600284 TAS2R8Q9NYW2 309 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms