RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 SPTAN1Q13813 2472 aaKnown RBP13.95□□□□□ -0.18
SHKBP1-216ENST00000598201 TRAV3A0A0B4J244 114 aa13.95□□□□□ -0.18
SHKBP1-216ENST00000598201 NUDT19A8MXV4 375 aa13.95□□□□□ -0.18
SHKBP1-216ENST00000598201 IGFBP2P18065 325 aa13.95□□□□□ -0.18
SHKBP1-216ENST00000598201 KIR2DS2P43631 304 aa13.95□□□□□ -0.18
SHKBP1-216ENST00000598201 CAMLGP49069 296 aa13.95□□□□□ -0.18
SHKBP1-216ENST00000598201 F2RL1P55085 397 aa13.95□□□□□ -0.18
SHKBP1-216ENST00000598201 OR10A7Q8NGE5 316 aa13.95□□□□□ -0.18
SHKBP1-216ENST00000598201 DTD1Q8TEA8 209 aa13.95□□□□□ -0.18
SHKBP1-216ENST00000598201 PSMG3-AS1Q96PY0 264 aa13.95□□□□□ -0.18
SHKBP1-216ENST00000598201 FAM96BQ9Y3D0 163 aa13.95□□□□□ -0.18
SHKBP1-216ENST00000598201 DCHS2Q6V1P9 2916 aa13.94□□□□□ -0.18
SHKBP1-216ENST00000598201 DFFBO76075 338 aa13.94□□□□□ -0.18
SHKBP1-216ENST00000598201 LY6HO94772 140 aa13.94□□□□□ -0.18
SHKBP1-216ENST00000598201 PRH1P02810 166 aa13.94□□□□□ -0.18
SHKBP1-216ENST00000598201 DAOP14920 347 aa13.94□□□□□ -0.18
SHKBP1-216ENST00000598201 NQO2P16083 231 aa13.94□□□□□ -0.18
SHKBP1-216ENST00000598201 THBS3P49746 956 aa13.94□□□□□ -0.18
SHKBP1-216ENST00000598201 PPOXP50336 477 aa13.94□□□□□ -0.18
SHKBP1-216ENST00000598201 ARHGDIBP52566 201 aa13.94□□□□□ -0.18
SHKBP1-216ENST00000598201 DLX6P56179 175 aa13.94□□□□□ -0.18
SHKBP1-216ENST00000598201 ZNF616Q08AN1 781 aa13.94□□□□□ -0.18
SHKBP1-216ENST00000598201 OR4S2Q8NH73 311 aa13.94□□□□□ -0.18
SHKBP1-216ENST00000598201 CT45A6P0DMU7 189 aa13.94□□□□□ -0.18
SHKBP1-216ENST00000598201 CT45A5P0DMU8 189 aa13.94□□□□□ -0.18
SHKBP1-216ENST00000598201 CT45A7P0DMV0 189 aa13.94□□□□□ -0.18
SHKBP1-216ENST00000598201 RAB5CP51148 216 aa13.94□□□□□ -0.18
SHKBP1-216ENST00000598201 AARDQ4LEZ3 155 aa13.94□□□□□ -0.18
SHKBP1-216ENST00000598201 TMEM140Q9NV12 185 aa13.94□□□□□ -0.18
SHKBP1-216ENST00000598201 TMEM218A2RU14 115 aa13.93□□□□□ -0.18
SHKBP1-216ENST00000598201 APOC3P02656 99 aa13.93□□□□□ -0.18
SHKBP1-216ENST00000598201 SOD3P08294 240 aa13.93□□□□□ -0.18
SHKBP1-216ENST00000598201 OR8G2PQ6IF36 304 aa13.93□□□□□ -0.18
SHKBP1-216ENST00000598201 FAM213BQ8TBF2 198 aa13.93□□□□□ -0.18
SHKBP1-216ENST00000598201 GNPNAT1Q96EK6 184 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-216ENST00000598201 STRAPQ9Y3F4 350 aaKnown RBP13.93□□□□□ -0.18
SHKBP1-216ENST00000598201 UTP20O75691 2785 aaKnown RBP13.93□□□□□ -0.18
SHKBP1-216ENST00000598201 USP9YO00507 2555 aaPredicted RBP13.93□□□□□ -0.18
SHKBP1-216ENST00000598201 FAM90A9PA6NNJ1 464 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 CEBPZOSA8MTT3 80 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 IGHV2-70P01814 119 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 ADCYAP1P18509 176 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 ERVK-16P61578 105 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 RPS16P62249 146 aaKnown RBP13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 RELBQ01201 579 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 TMEM155Q4W5P6 130 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 AVPI1Q5T686 147 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 SP5Q6BEB4 398 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 C11orf71Q6IPW1 123 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 THNSL2Q86YJ6 484 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 ADTRPQ96IZ2 230 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 DOPEY2Q9Y3R5 2298 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 A0A1W2PPR1 153 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 PMS2P5A8MQ11 134 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 IFNA5P01569 189 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 ATF4P18848 351 aaPredicted RBP13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 HBG1P69891 147 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 HBG2P69892 147 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 SLC38A11Q08AI6 406 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 ZNF841Q6ZN19 808 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 OR4A16Q8NH70 328 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 RSG1Q9BU20 258 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 TREM1Q9NP99 234 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 CBLN4Q9NTU7 201 aa13.92□□□□□ -0.18
SHKBP1-216ENST00000598201 TSPAN15O95858 294 aa13.91□□□□□ -0.18
SHKBP1-216ENST00000598201 IFNA17P01571 189 aa13.91□□□□□ -0.18
SHKBP1-216ENST00000598201 ATRAIDQ6UW56 229 aa13.91□□□□□ -0.18
SHKBP1-216ENST00000598201 ZNF833PQ6ZTB9 187 aa13.91□□□□□ -0.18
SHKBP1-216ENST00000598201 LILRB2Q8N423 598 aa13.91□□□□□ -0.18
SHKBP1-216ENST00000598201 C11orf42Q8N5U0 333 aa13.91□□□□□ -0.18
SHKBP1-216ENST00000598201 RHOVQ96L33 236 aa13.91□□□□□ -0.18
SHKBP1-216ENST00000598201 SPOCK3Q9BQ16 436 aa13.91□□□□□ -0.18
SHKBP1-216ENST00000598201 FBXO7Q9Y3I1 522 aa13.91□□□□□ -0.18
SHKBP1-216ENST00000598201 C9JQL5 133 aa13.91□□□□□ -0.18
SHKBP1-216ENST00000598201 PPIHO43447 177 aaKnown RBP13.91□□□□□ -0.18
SHKBP1-216ENST00000598201 IGKV1-16P04430 117 aa13.91□□□□□ -0.18
SHKBP1-216ENST00000598201 SLC25A24Q6NUK1 477 aa13.91□□□□□ -0.18
SHKBP1-216ENST00000598201 UQCC1Q9NVA1 299 aa13.91□□□□□ -0.18
SHKBP1-216ENST00000598201 A0A1B0GV50 99 aa13.9□□□□□ -0.18
SHKBP1-216ENST00000598201 UMAD1C9J7I0 102 aa13.9□□□□□ -0.18
SHKBP1-216ENST00000598201 LRRC75BQ2VPJ9 315 aa13.9□□□□□ -0.18
SHKBP1-216ENST00000598201 OR4A47Q6IF82 309 aa13.9□□□□□ -0.18
SHKBP1-216ENST00000598201 CIB3Q96Q77 187 aaPredicted RBP13.9□□□□□ -0.18
SHKBP1-216ENST00000598201 MRPL20Q9BYC9 149 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-216ENST00000598201 MALRD1Q5VYJ5 2156 aa13.9□□□□□ -0.18
SHKBP1-216ENST00000598201 RNASEK-C17orf49H0YIS7 233 aa13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 F12P00748 615 aaPredicted RBP13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 CD5P06127 495 aa13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 COL8A1P27658 744 aa13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 SNCAP37840 140 aa13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 S100A12P80511 92 aa13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 DIAPH2-AS1Q14236 149 aa13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 LINC00518Q8N0U6 118 aa13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 SCRT1Q9BWW7 348 aa13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 RAB1BQ9H0U4 201 aa13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 SLC35D1Q9NTN3 355 aa13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 SRRM4A7MD48 611 aaKnown RBP13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 C15orf62A8K5M9 175 aa13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 J3QR06 171 aa13.89□□□□□ -0.19
SHKBP1-216ENST00000598201 FSTL3O95633 263 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms