RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 PECRQ9BY49 303 aa12.94□□□□□ -0.34
PNKP-210ENST00000597965 OR2D2Q9H210 308 aa12.94□□□□□ -0.34
PNKP-210ENST00000597965 KCNK15Q9H427 330 aa12.94□□□□□ -0.34
PNKP-210ENST00000597965 RBM7Q9Y580 266 aaKnown RBP12.94□□□□□ -0.34
PNKP-210ENST00000597965 CSMD3Q7Z407 3707 aa12.93□□□□□ -0.34
PNKP-210ENST00000597965 FOXI3A8MTJ6 420 aaPredicted RBP12.93□□□□□ -0.34
PNKP-210ENST00000597965 FABP7O15540 132 aa12.93□□□□□ -0.34
PNKP-210ENST00000597965 TUSC2O75896 110 aa12.93□□□□□ -0.34
PNKP-210ENST00000597965 ACTL6BO94805 426 aa12.93□□□□□ -0.34
PNKP-210ENST00000597965 CD3GP09693 182 aa12.93□□□□□ -0.34
PNKP-210ENST00000597965 OR9G9P0C7N8 305 aa12.93□□□□□ -0.34
PNKP-210ENST00000597965 TMEM50BP56557 158 aa12.93□□□□□ -0.34
PNKP-210ENST00000597965 LINC00205P59089 165 aa12.93□□□□□ -0.34
PNKP-210ENST00000597965 SSBP2P81877 361 aaPredicted RBP12.93□□□□□ -0.34
PNKP-210ENST00000597965 PJVKQ0ZLH3 352 aa12.93□□□□□ -0.34
PNKP-210ENST00000597965 TEX45Q8NA69 505 aa12.93□□□□□ -0.34
PNKP-210ENST00000597965 MCFD2Q8NI22 146 aa12.93□□□□□ -0.34
PNKP-210ENST00000597965 SDHAF2Q9NX18 166 aa12.93□□□□□ -0.34
PNKP-210ENST00000597965 IGKV1-6A0A0C4DH72 117 aa12.92□□□□□ -0.34
PNKP-210ENST00000597965 MSGN1A6NI15 193 aa12.92□□□□□ -0.34
PNKP-210ENST00000597965 BET1O15155 118 aa12.92□□□□□ -0.34
PNKP-210ENST00000597965 CD81P60033 236 aa12.92□□□□□ -0.34
PNKP-210ENST00000597965 UBE2KP61086 200 aa12.92□□□□□ -0.34
PNKP-210ENST00000597965 DYRK1AQ13627 763 aa12.92□□□□□ -0.34
PNKP-210ENST00000597965 ADAD2Q8NCV1 583 aaKnown RBP12.92□□□□□ -0.34
PNKP-210ENST00000597965 OSR1Q8TAX0 266 aaPredicted RBP12.92□□□□□ -0.34
PNKP-210ENST00000597965 KCTD12Q96CX2 325 aaKnown RBP12.92□□□□□ -0.34
PNKP-210ENST00000597965 SPIN2AQ99865 258 aa12.92□□□□□ -0.34
PNKP-210ENST00000597965 SPIN2BQ9BPZ2 258 aa12.92□□□□□ -0.34
PNKP-210ENST00000597965 CABLES2Q9BTV7 478 aa12.92□□□□□ -0.34
PNKP-210ENST00000597965 DNAH1Q9P2D7 4330 aa12.92□□□□□ -0.34
PNKP-210ENST00000597965 LYSTQ99698 3801 aa12.91□□□□□ -0.34
PNKP-210ENST00000597965 A0A075B6Q4 140 aa12.91□□□□□ -0.34
PNKP-210ENST00000597965 TRBV6-7A0A0A0MS04 114 aa12.91□□□□□ -0.34
PNKP-210ENST00000597965 CLEC2LP0C7M8 214 aa12.91□□□□□ -0.34
PNKP-210ENST00000597965 ATP5G2Q06055 141 aa12.91□□□□□ -0.34
PNKP-210ENST00000597965 TNXAQ16473 311 aa12.91□□□□□ -0.34
PNKP-210ENST00000597965 SLC25A42Q86VD7 318 aa12.91□□□□□ -0.34
PNKP-210ENST00000597965 DYNLRB2Q8TF09 96 aa12.91□□□□□ -0.34
PNKP-210ENST00000597965 FAM3DQ96BQ1 224 aa12.91□□□□□ -0.34
PNKP-210ENST00000597965 RAB3CQ96E17 227 aa12.91□□□□□ -0.34
PNKP-210ENST00000597965 NEURL2Q9BR09 285 aa12.91□□□□□ -0.34
PNKP-210ENST00000597965 GINS4Q9BRT9 223 aa12.91□□□□□ -0.34
PNKP-210ENST00000597965 HIPK2Q9H2X6 1198 aa12.91□□□□□ -0.34
PNKP-210ENST00000597965 RAB22AQ9UL26 194 aa12.91□□□□□ -0.34
PNKP-210ENST00000597965 SDC2P34741 201 aa12.9□□□□□ -0.34
PNKP-210ENST00000597965 RORCP51449 518 aa12.9□□□□□ -0.34
PNKP-210ENST00000597965 MECP2P51608 486 aaKnown RBP12.9□□□□□ -0.34
PNKP-210ENST00000597965 RHOGP84095 191 aa12.9□□□□□ -0.34
PNKP-210ENST00000597965 PRSS8Q16651 343 aa12.9□□□□□ -0.34
PNKP-210ENST00000597965 C2orf76Q3KRA6 126 aa12.9□□□□□ -0.34
PNKP-210ENST00000597965 PLAC9Q5JTB6 97 aa12.9□□□□□ -0.34
PNKP-210ENST00000597965 NECAP1Q8NC96 275 aa12.9□□□□□ -0.34
PNKP-210ENST00000597965 SRSF12Q8WXF0 261 aaKnown RBP12.9□□□□□ -0.34
PNKP-210ENST00000597965 ACOT12Q8WYK0 555 aa12.9□□□□□ -0.34
PNKP-210ENST00000597965 SLC25A46Q96AG3 418 aa12.9□□□□□ -0.34
PNKP-210ENST00000597965 AKIP1Q9NQ31 210 aa12.9□□□□□ -0.34
PNKP-210ENST00000597965 AK6Q9Y3D8 172 aaKnown RBP12.9□□□□□ -0.34
PNKP-210ENST00000597965 TRBV12-3P01733 135 aa12.89□□□□□ -0.35
PNKP-210ENST00000597965 FCGR3AP08637 254 aa12.89□□□□□ -0.35
PNKP-210ENST00000597965 SNRPBP14678 240 aaKnown RBP12.89□□□□□ -0.35
PNKP-210ENST00000597965 EXOSC2Q13868 293 aaKnown RBP12.89□□□□□ -0.35
PNKP-210ENST00000597965 IGSF11Q5DX21 431 aa12.89□□□□□ -0.35
PNKP-210ENST00000597965 LINC00322Q6ZN03 302 aaPredicted RBP12.89□□□□□ -0.35
PNKP-210ENST00000597965 PLEKHA3Q9HB20 300 aa12.89□□□□□ -0.35
PNKP-210ENST00000597965 TECRQ9NZ01 308 aaKnown RBP12.89□□□□□ -0.35
PNKP-210ENST00000597965 V9GY05 133 aa12.89□□□□□ -0.35
PNKP-210ENST00000597965 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.88□□□□□ -0.35
PNKP-210ENST00000597965 TRBV9A0A0B4J1U6 114 aa12.88□□□□□ -0.35
PNKP-210ENST00000597965 IZUMO1RA6ND01 250 aa12.88□□□□□ -0.35
PNKP-210ENST00000597965 SRRM4A7MD48 611 aaKnown RBP12.88□□□□□ -0.35
PNKP-210ENST00000597965 CRYZL1O95825 349 aa12.88□□□□□ -0.35
PNKP-210ENST00000597965 CALRP27797 417 aaKnown RBP12.88□□□□□ -0.35
PNKP-210ENST00000597965 TALDO1P37837 337 aa12.88□□□□□ -0.35
PNKP-210ENST00000597965 ARL6IP1Q15041 203 aa12.88□□□□□ -0.35
PNKP-210ENST00000597965 CD300EQ496F6 205 aaPredicted RBP12.88□□□□□ -0.35
PNKP-210ENST00000597965 MMD2Q8IY49 270 aa12.88□□□□□ -0.35
PNKP-210ENST00000597965 MFSD4AQ8N468 514 aa12.88□□□□□ -0.35
PNKP-210ENST00000597965 S100ZQ8WXG8 99 aa12.88□□□□□ -0.35
PNKP-210ENST00000597965 ZNF230Q9UIE0 474 aaPredicted RBP12.88□□□□□ -0.35
PNKP-210ENST00000597965 BMPR1BO00238 502 aa12.87□□□□□ -0.35
PNKP-210ENST00000597965 PDCD5O14737 125 aa12.87□□□□□ -0.35
PNKP-210ENST00000597965 SLC22A5O76082 557 aa12.87□□□□□ -0.35
PNKP-210ENST00000597965 GSTT2P0CG29 244 aa12.87□□□□□ -0.35
PNKP-210ENST00000597965 GSTT2BP0CG30 244 aa12.87□□□□□ -0.35
PNKP-210ENST00000597965 APELAP0DMC3 54 aa12.87□□□□□ -0.35
PNKP-210ENST00000597965 DUTP33316 252 aaKnown RBP12.87□□□□□ -0.35
PNKP-210ENST00000597965 MXD1Q05195 221 aa12.87□□□□□ -0.35
PNKP-210ENST00000597965 ZNF846Q147U1 533 aa12.87□□□□□ -0.35
PNKP-210ENST00000597965 CDK10Q15131 360 aa12.87□□□□□ -0.35
PNKP-210ENST00000597965 SLC16A13Q7RTY0 426 aa12.87□□□□□ -0.35
PNKP-210ENST00000597965 TTC9CQ8N5M4 171 aa12.87□□□□□ -0.35
PNKP-210ENST00000597965 DDB2Q92466 427 aa12.87□□□□□ -0.35
PNKP-210ENST00000597965 GFI1Q99684 422 aa12.87□□□□□ -0.35
PNKP-210ENST00000597965 ADAM30Q9UKF2 790 aa12.87□□□□□ -0.35
PNKP-210ENST00000597965 MRPS7Q9Y2R9 242 aaKnown RBP12.87□□□□□ -0.35
PNKP-210ENST00000597965 PRELID3BQ9Y3B1 194 aa12.87□□□□□ -0.35
PNKP-210ENST00000597965 STARD9Q9P2P6 4700 aa12.87□□□□□ -0.35
PNKP-210ENST00000597965 METTL21EPA6NDL7 271 aa12.86□□□□□ -0.35
PNKP-210ENST00000597965 OR11H12B2RN74 326 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms