RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 IGF1P05019 195 aa15.47■□□□□ 0.07
SHKBP1-214ENST00000597396 CRYGBP07316 175 aa15.47■□□□□ 0.07
SHKBP1-214ENST00000597396 SAA1P0DJI8 122 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-214ENST00000597396 BRWD1-AS2P59051 145 aa15.47■□□□□ 0.07
SHKBP1-214ENST00000597396 GNB1P62873 340 aa15.47■□□□□ 0.07
SHKBP1-214ENST00000597396 NDPQ00604 133 aa15.47■□□□□ 0.07
SHKBP1-214ENST00000597396 KHDC1LQ5JSQ8 128 aa15.47■□□□□ 0.07
SHKBP1-214ENST00000597396 COMMD1Q8N668 190 aa15.47■□□□□ 0.07
SHKBP1-214ENST00000597396 TERB2Q8NHR7 220 aa15.47■□□□□ 0.07
SHKBP1-214ENST00000597396 CD300LFQ8TDQ1 290 aa15.47■□□□□ 0.07
SHKBP1-214ENST00000597396 ZNF580Q9UK33 172 aa15.47■□□□□ 0.07
SHKBP1-214ENST00000597396 WSB1Q9Y6I7 421 aa15.47■□□□□ 0.07
SHKBP1-214ENST00000597396 MGAM2Q2M2H8 2515 aa15.47■□□□□ 0.07
SHKBP1-214ENST00000597396 TCRBV4S1A1TA0A5B7 111 aa15.46■□□□□ 0.07
SHKBP1-214ENST00000597396 RAMP3O60896 148 aa15.46■□□□□ 0.07
SHKBP1-214ENST00000597396 CNIH1O95406 144 aa15.46■□□□□ 0.07
SHKBP1-214ENST00000597396 OPN1MWP04001 364 aa15.46■□□□□ 0.07
SHKBP1-214ENST00000597396 ZNF735P0CB33 412 aa15.46■□□□□ 0.07
SHKBP1-214ENST00000597396 OPN1MW2P0DN77 364 aa15.46■□□□□ 0.07
SHKBP1-214ENST00000597396 OPN1MW3P0DN78 364 aa15.46■□□□□ 0.07
SHKBP1-214ENST00000597396 ECSCRQ19T08 205 aa15.46■□□□□ 0.07
SHKBP1-214ENST00000597396 C2orf68Q2NKX9 166 aa15.46■□□□□ 0.07
SHKBP1-214ENST00000597396 NSUN5P1Q3KNT7 163 aa15.46■□□□□ 0.07
SHKBP1-214ENST00000597396 ZNF562Q6V9R5 426 aa15.46■□□□□ 0.07
SHKBP1-214ENST00000597396 IDO2Q6ZQW0 420 aa15.46■□□□□ 0.07
SHKBP1-214ENST00000597396 ARPC1AQ92747 370 aa15.46■□□□□ 0.07
SHKBP1-214ENST00000597396 TRAV41A0A0B4J266 112 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 WIPF1O43516 503 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 CREBL2O60519 120 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 HPRT1P00492 218 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 F2RP25116 425 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 FAUP35544 74 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 AP3S2P59780 193 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 CD83Q01151 205 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 PJVKQ0ZLH3 352 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 FXYD3Q14802 87 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 TEX38Q6PEX7 206 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 SSX9Q7RTT3 188 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 NDUFA11Q86Y39 141 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 VKORC1L1Q8N0U8 176 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 TOMM5Q8N4H5 51 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 GRPEL2Q8TAA5 225 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 VSTM2AQ8TAG5 236 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 ZFAND1Q8TCF1 268 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 TRIM63Q969Q1 353 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 ZNF486Q96H40 463 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 PRRT1Q99946 306 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 AIFM2Q9BRQ8 373 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 SRRQ9GZT4 340 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 BATF3Q9NR55 127 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 MCUBQ9NWR8 336 aa15.45■□□□□ 0.06
SHKBP1-214ENST00000597396 A0A1W2PRX2 142 aa15.44■□□□□ 0.06
SHKBP1-214ENST00000597396 G3V318 75 aa15.44■□□□□ 0.06
SHKBP1-214ENST00000597396 ECI1P42126 302 aa15.44■□□□□ 0.06
SHKBP1-214ENST00000597396 TMEM267Q0VDI3 215 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-214ENST00000597396 TNXAQ16473 311 aa15.44■□□□□ 0.06
SHKBP1-214ENST00000597396 CNPY1Q3B7I2 92 aa15.44■□□□□ 0.06
SHKBP1-214ENST00000597396 TCTEX1D4Q5JR98 221 aa15.44■□□□□ 0.06
SHKBP1-214ENST00000597396 TBC1D26Q86UD7 250 aa15.44■□□□□ 0.06
SHKBP1-214ENST00000597396 TCTEX1D1Q8N7M0 179 aa15.44■□□□□ 0.06
SHKBP1-214ENST00000597396 MARCH1Q8TCQ1 289 aa15.44■□□□□ 0.06
SHKBP1-214ENST00000597396 RHOVQ96L33 236 aa15.44■□□□□ 0.06
SHKBP1-214ENST00000597396 FAM103A1Q9BTL3 118 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-214ENST00000597396 SLC2A9Q9NRM0 540 aa15.44■□□□□ 0.06
SHKBP1-214ENST00000597396 SCP2D1Q9UJQ7 156 aa15.44■□□□□ 0.06
SHKBP1-214ENST00000597396 FBXO7Q9Y3I1 522 aa15.44■□□□□ 0.06
SHKBP1-214ENST00000597396 TSSC4Q9Y5U2 329 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-214ENST00000597396 WNK1Q9H4A3 2382 aa15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 ARPC1BO15143 372 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 ACTL6BO94805 426 aa15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 OR2A4O95047 310 aa15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 S1PR2O95136 353 aa15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 NQO2P16083 231 aa15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 PI3P19957 117 aa15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 INPP1P49441 399 aa15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 TAS2R31P59538 309 aa15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 PRSS8Q16651 343 aa15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 CXorf66Q5JRM2 361 aaPredicted RBP15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 UNQ5815/PRO19632Q6UWF5 114 aa15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 MMD2Q8IY49 270 aa15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 GDPD1Q8N9F7 314 aa15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 CCDC71LQ8N9Z2 235 aa15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 OR51S1Q8NGJ8 323 aa15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 OR13C8Q8NGS7 320 aa15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 OR2A7Q96R45 310 aa15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 PLEKHA2Q9HB19 425 aa15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 COMMD9Q9P000 198 aa15.43■□□□□ 0.06
SHKBP1-214ENST00000597396 KBTBD11O94819 623 aa15.42■□□□□ 0.06
SHKBP1-214ENST00000597396 ELANEP08246 267 aa15.42■□□□□ 0.06
SHKBP1-214ENST00000597396 LPAR6P43657 344 aa15.42■□□□□ 0.06
SHKBP1-214ENST00000597396 CRIP2P52943 208 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-214ENST00000597396 PIGPP57054 158 aa15.42■□□□□ 0.06
SHKBP1-214ENST00000597396 ERVK-16P61578 105 aa15.42■□□□□ 0.06
SHKBP1-214ENST00000597396 RND3P61587 244 aa15.42■□□□□ 0.06
SHKBP1-214ENST00000597396 CFHR3Q02985 330 aa15.42■□□□□ 0.06
SHKBP1-214ENST00000597396 FOXE3Q13461 319 aa15.42■□□□□ 0.06
SHKBP1-214ENST00000597396 KLF9Q13886 244 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-214ENST00000597396 TRIQKQ629K1 86 aa15.42■□□□□ 0.06
SHKBP1-214ENST00000597396 ZNF57Q68EA5 555 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-214ENST00000597396 DMBX1Q8NFW5 382 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms