RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 PLEKHA2Q9HB19 425 aa11.38□□□□□ -0.59
VRK3-213ENST00000597215 FAM212BQ9NTI7 297 aaPredicted RBP11.38□□□□□ -0.59
VRK3-213ENST00000597215 SERTAD4Q9NUC0 356 aa11.38□□□□□ -0.59
VRK3-213ENST00000597215 COL6A5A8TX70 2615 aa11.38□□□□□ -0.59
VRK3-213ENST00000597215 SRRM4A7MD48 611 aaKnown RBP11.37□□□□□ -0.59
VRK3-213ENST00000597215 HPRT1P00492 218 aa11.37□□□□□ -0.59
VRK3-213ENST00000597215 IGHG2P01859 326 aa11.37□□□□□ -0.59
VRK3-213ENST00000597215 SAA1P0DJI8 122 aaPredicted RBP11.37□□□□□ -0.59
VRK3-213ENST00000597215 PROK1P58294 105 aa11.37□□□□□ -0.59
VRK3-213ENST00000597215 C12orf54Q6X4T0 127 aa11.37□□□□□ -0.59
VRK3-213ENST00000597215 TEX45Q8NA69 505 aa11.37□□□□□ -0.59
VRK3-213ENST00000597215 VSTM2AQ8TAG5 236 aa11.37□□□□□ -0.59
VRK3-213ENST00000597215 RTBDNQ9BSG5 229 aaPredicted RBP11.37□□□□□ -0.59
VRK3-213ENST00000597215 C5orf66Q9H5L9 145 aa11.37□□□□□ -0.59
VRK3-213ENST00000597215 COMMD9Q9P000 198 aa11.37□□□□□ -0.59
VRK3-213ENST00000597215 H0Y980 276 aa11.36□□□□□ -0.59
VRK3-213ENST00000597215 UPK1BO75841 260 aa11.36□□□□□ -0.59
VRK3-213ENST00000597215 S1PR2O95136 353 aa11.36□□□□□ -0.59
VRK3-213ENST00000597215 CRYGBP07316 175 aa11.36□□□□□ -0.59
VRK3-213ENST00000597215 VSIG10L2P0DP72 767 aa11.36□□□□□ -0.59
VRK3-213ENST00000597215 NQO2P16083 231 aa11.36□□□□□ -0.59
VRK3-213ENST00000597215 TAS2R31P59538 309 aa11.36□□□□□ -0.59
VRK3-213ENST00000597215 RBMS2Q15434 407 aaKnown RBP11.36□□□□□ -0.59
VRK3-213ENST00000597215 TMEM95Q3KNT9 176 aa11.36□□□□□ -0.59
VRK3-213ENST00000597215 PPP1R27Q86WC6 154 aa11.36□□□□□ -0.59
VRK3-213ENST00000597215 FOXRED2Q8IWF2 684 aa11.36□□□□□ -0.59
VRK3-213ENST00000597215 RHOVQ96L33 236 aa11.36□□□□□ -0.59
VRK3-213ENST00000597215 CLCC1Q96S66 551 aa11.36□□□□□ -0.59
VRK3-213ENST00000597215 HSPB9Q9BQS6 159 aa11.36□□□□□ -0.59
VRK3-213ENST00000597215 TPSG1Q9NRR2 321 aa11.36□□□□□ -0.59
VRK3-213ENST00000597215 VSIG4Q9Y279 399 aa11.36□□□□□ -0.59
VRK3-213ENST00000597215 IGHV7-81A0A0B4J1V7 117 aa11.35□□□□□ -0.59
VRK3-213ENST00000597215 TEX13DA0A0J9YY54 714 aaPredicted RBP11.35□□□□□ -0.59
VRK3-213ENST00000597215 C3orf85A0A1B0GTC6 90 aa11.35□□□□□ -0.59
VRK3-213ENST00000597215 HAX1O00165 279 aa11.35□□□□□ -0.59
VRK3-213ENST00000597215 AP4M1O00189 453 aa11.35□□□□□ -0.59
VRK3-213ENST00000597215 PLA2G10O15496 165 aa11.35□□□□□ -0.59
VRK3-213ENST00000597215 LYRM1O43325 122 aa11.35□□□□□ -0.59
VRK3-213ENST00000597215 CREBL2O60519 120 aaPredicted RBP11.35□□□□□ -0.59
VRK3-213ENST00000597215 B3GALNT1O75752 331 aa11.35□□□□□ -0.59
VRK3-213ENST00000597215 CA2P00918 260 aa11.35□□□□□ -0.59
VRK3-213ENST00000597215 SERPINE2P07093 398 aa11.35□□□□□ -0.59
VRK3-213ENST00000597215 LPAR6P43657 344 aa11.35□□□□□ -0.59
VRK3-213ENST00000597215 CCR6P51684 374 aa11.35□□□□□ -0.59
VRK3-213ENST00000597215 ERVK-16P61578 105 aa11.35□□□□□ -0.59
VRK3-213ENST00000597215 POU2AF1Q16633 256 aa11.35□□□□□ -0.59
VRK3-213ENST00000597215 ZNF585BQ52M93 769 aa11.35□□□□□ -0.59
VRK3-213ENST00000597215 KLHDC1Q8N7A1 406 aa11.35□□□□□ -0.59
VRK3-213ENST00000597215 WFDC12Q8WWY7 111 aa11.35□□□□□ -0.59
VRK3-213ENST00000597215 OR51J1Q9H342 316 aa11.35□□□□□ -0.59
VRK3-213ENST00000597215 CRYM-AS1A6NIL9 109 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 FCN1O00602 326 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 OR2A4O95047 310 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 NDUFB6O95139 128 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 RPA2P15927 270 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 BTCP35070 178 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 CX3CL1P78423 397 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 ZNF562Q6V9R5 426 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 SSX9Q7RTT3 188 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 SGPP2Q8IWX5 399 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 VKORC1L1Q8N0U8 176 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 PUSL1Q8N0Z8 303 aaKnown RBP11.34□□□□□ -0.59
VRK3-213ENST00000597215 C3orf56Q8N813 242 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 DMBX1Q8NFW5 382 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 CHPT1Q8WUD6 406 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 R3HDM4Q96D70 268 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 OR2A7Q96R45 310 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 TP53RKQ96S44 253 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 WNT10AQ9GZT5 417 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 NAA60Q9H7X0 242 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 ZNF580Q9UK33 172 aa11.34□□□□□ -0.59
VRK3-213ENST00000597215 PLXNB1O43157 2135 aa11.33□□□□□ -0.6
VRK3-213ENST00000597215 LINC01548A6NM66 108 aa11.33□□□□□ -0.6
VRK3-213ENST00000597215 MARCH11A6NNE9 402 aa11.33□□□□□ -0.6
VRK3-213ENST00000597215 ACTL6BO94805 426 aa11.33□□□□□ -0.6
VRK3-213ENST00000597215 KBTBD11O94819 623 aa11.33□□□□□ -0.6
VRK3-213ENST00000597215 AKR1C4P17516 323 aa11.33□□□□□ -0.6
VRK3-213ENST00000597215 GNB1P62873 340 aa11.33□□□□□ -0.6
VRK3-213ENST00000597215 PRSS8Q16651 343 aa11.33□□□□□ -0.6
VRK3-213ENST00000597215 MZT2BQ6NZ67 158 aa11.33□□□□□ -0.6
VRK3-213ENST00000597215 TMED4Q7Z7H5 227 aa11.33□□□□□ -0.6
VRK3-213ENST00000597215 CENPVQ7Z7K6 275 aaPredicted RBP11.33□□□□□ -0.6
VRK3-213ENST00000597215 MMD2Q8IY49 270 aa11.33□□□□□ -0.6
VRK3-213ENST00000597215 STPG2Q8N412 459 aa11.33□□□□□ -0.6
VRK3-213ENST00000597215 ADAD2Q8NCV1 583 aaKnown RBP11.33□□□□□ -0.6
VRK3-213ENST00000597215 OR4A5Q8NH83 315 aa11.33□□□□□ -0.6
VRK3-213ENST00000597215 TMEM167AQ8TBQ9 72 aa11.33□□□□□ -0.6
VRK3-213ENST00000597215 ABHD5Q8WTS1 349 aa11.33□□□□□ -0.6
VRK3-213ENST00000597215 TMEM230Q96A57 120 aa11.33□□□□□ -0.6
VRK3-213ENST00000597215 NOL4LQ96MY1 436 aaPredicted RBP11.33□□□□□ -0.6
VRK3-213ENST00000597215 GON7Q9BXV9 100 aa11.33□□□□□ -0.6
VRK3-213ENST00000597215 PARP11Q9NR21 331 aa11.33□□□□□ -0.6
VRK3-213ENST00000597215 BET1LQ9NYM9 111 aa11.33□□□□□ -0.6
VRK3-213ENST00000597215 ATP6V0E1O15342 81 aa11.32□□□□□ -0.6
VRK3-213ENST00000597215 CNIH1O95406 144 aa11.32□□□□□ -0.6
VRK3-213ENST00000597215 KRASP01116 189 aa11.32□□□□□ -0.6
VRK3-213ENST00000597215 IGF1P05019 195 aa11.32□□□□□ -0.6
VRK3-213ENST00000597215 OR5AC1P0C628 307 aa11.32□□□□□ -0.6
VRK3-213ENST00000597215 UCP1P25874 307 aa11.32□□□□□ -0.6
VRK3-213ENST00000597215 NDPQ00604 133 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms