RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 ARL6IP1Q15041 203 aa12.98□□□□□ -0.33
CCDC9-202ENST00000595659 RPEL1Q2QD12 228 aa12.98□□□□□ -0.33
CCDC9-202ENST00000595659 CASC10Q5T4H9 136 aa12.98□□□□□ -0.33
CCDC9-202ENST00000595659 KCTD9Q7L273 389 aa12.98□□□□□ -0.33
CCDC9-202ENST00000595659 SGPP2Q8IWX5 399 aa12.98□□□□□ -0.33
CCDC9-202ENST00000595659 OSR1Q8TAX0 266 aaPredicted RBP12.98□□□□□ -0.33
CCDC9-202ENST00000595659 LGALS14Q8TCE9 139 aa12.98□□□□□ -0.33
CCDC9-202ENST00000595659 GPHA2Q96T91 129 aa12.98□□□□□ -0.33
CCDC9-202ENST00000595659 CENPOQ9BU64 300 aa12.98□□□□□ -0.33
CCDC9-202ENST00000595659 OR51E2Q9H255 320 aa12.98□□□□□ -0.33
CCDC9-202ENST00000595659 AKIP1Q9NQ31 210 aa12.98□□□□□ -0.33
CCDC9-202ENST00000595659 SPATA2Q9UM82 520 aa12.98□□□□□ -0.33
CCDC9-202ENST00000595659 IZUMO1RA6ND01 250 aa12.97□□□□□ -0.33
CCDC9-202ENST00000595659 HMX3A6NHT5 357 aa12.97□□□□□ -0.33
CCDC9-202ENST00000595659 SSX5O60225 188 aa12.97□□□□□ -0.33
CCDC9-202ENST00000595659 IGLV2-14P01704 120 aa12.97□□□□□ -0.33
CCDC9-202ENST00000595659 CTXN2P0C2S0 81 aa12.97□□□□□ -0.33
CCDC9-202ENST00000595659 FGF9P31371 208 aaPredicted RBP12.97□□□□□ -0.33
CCDC9-202ENST00000595659 MXD1Q05195 221 aa12.97□□□□□ -0.33
CCDC9-202ENST00000595659 ATP5G2Q06055 141 aa12.97□□□□□ -0.33
CCDC9-202ENST00000595659 CDK10Q15131 360 aa12.97□□□□□ -0.33
CCDC9-202ENST00000595659 C19orf35Q6ZS72 473 aa12.97□□□□□ -0.33
CCDC9-202ENST00000595659 RNF167Q9H6Y7 350 aa12.97□□□□□ -0.33
CCDC9-202ENST00000595659 C19orf73Q9NVV2 129 aa12.97□□□□□ -0.33
CCDC9-202ENST00000595659 RBMX2Q9Y388 322 aaKnown RBP12.97□□□□□ -0.33
CCDC9-202ENST00000595659 MRPS14O60783 128 aaKnown RBP12.96□□□□□ -0.33
CCDC9-202ENST00000595659 OR2J3O76001 311 aa12.96□□□□□ -0.33
CCDC9-202ENST00000595659 ATP6V1G2O95670 118 aa12.96□□□□□ -0.33
CCDC9-202ENST00000595659 FCER2P06734 321 aa12.96□□□□□ -0.33
CCDC9-202ENST00000595659 PTHLHP12272 177 aa12.96□□□□□ -0.33
CCDC9-202ENST00000595659 SDC2P34741 201 aa12.96□□□□□ -0.33
CCDC9-202ENST00000595659 EXOSC2Q13868 293 aaKnown RBP12.96□□□□□ -0.33
CCDC9-202ENST00000595659 TATDN3Q17R31 274 aa12.96□□□□□ -0.33
CCDC9-202ENST00000595659 SFXN4Q6P4A7 337 aa12.96□□□□□ -0.33
CCDC9-202ENST00000595659 CNIH2Q6PI25 160 aa12.96□□□□□ -0.33
CCDC9-202ENST00000595659 TCTEX1D2Q8WW35 142 aa12.96□□□□□ -0.33
CCDC9-202ENST00000595659 SNAPC3Q92966 411 aa12.96□□□□□ -0.33
CCDC9-202ENST00000595659 DCSTAMPQ9H295 470 aa12.96□□□□□ -0.33
CCDC9-202ENST00000595659 GAR1Q9NY12 217 aaKnown RBP12.96□□□□□ -0.33
CCDC9-202ENST00000595659 TAS2R8Q9NYW2 309 aa12.96□□□□□ -0.33
CCDC9-202ENST00000595659 SSR3Q9UNL2 185 aa12.96□□□□□ -0.33
CCDC9-202ENST00000595659 PRELID3BQ9Y3B1 194 aa12.96□□□□□ -0.33
CCDC9-202ENST00000595659 H0Y980 276 aa12.95□□□□□ -0.34
CCDC9-202ENST00000595659 BMPR1BO00238 502 aa12.95□□□□□ -0.34
CCDC9-202ENST00000595659 LYL1P12980 280 aa12.95□□□□□ -0.34
CCDC9-202ENST00000595659 CD36P16671 472 aa12.95□□□□□ -0.34
CCDC9-202ENST00000595659 ZFAND6Q6FIF0 208 aa12.95□□□□□ -0.34
CCDC9-202ENST00000595659 TPRA1Q86W33 373 aa12.95□□□□□ -0.34
CCDC9-202ENST00000595659 MMD2Q8IY49 270 aa12.95□□□□□ -0.34
CCDC9-202ENST00000595659 OR5H6Q8NGV6 325 aa12.95□□□□□ -0.34
CCDC9-202ENST00000595659 SPIN2AQ99865 258 aa12.95□□□□□ -0.34
CCDC9-202ENST00000595659 SPIN2BQ9BPZ2 258 aa12.95□□□□□ -0.34
CCDC9-202ENST00000595659 TM2D3Q9BRN9 247 aa12.95□□□□□ -0.34
CCDC9-202ENST00000595659 ANXA10Q9UJ72 324 aa12.95□□□□□ -0.34
CCDC9-202ENST00000595659 MRPS7Q9Y2R9 242 aaKnown RBP12.95□□□□□ -0.34
CCDC9-202ENST00000595659 TNFSF12O43508 249 aa12.94□□□□□ -0.34
CCDC9-202ENST00000595659 BRWD1-AS2P59051 145 aa12.94□□□□□ -0.34
CCDC9-202ENST00000595659 IDNKQ5T6J7 187 aa12.94□□□□□ -0.34
CCDC9-202ENST00000595659 TTC9CQ8N5M4 171 aa12.94□□□□□ -0.34
CCDC9-202ENST00000595659 GVQW1Q8N7I0 195 aa12.94□□□□□ -0.34
CCDC9-202ENST00000595659 FCGR1BQ92637 280 aa12.94□□□□□ -0.34
CCDC9-202ENST00000595659 FYTTD1Q96QD9 318 aaKnown RBP12.94□□□□□ -0.34
CCDC9-202ENST00000595659 RHBDL2Q9NX52 303 aa12.94□□□□□ -0.34
CCDC9-202ENST00000595659 SELENOKQ9Y6D0 94 aa12.94□□□□□ -0.34
CCDC9-202ENST00000595659 SORL1Q92673 2214 aa12.94□□□□□ -0.34
CCDC9-202ENST00000595659 STAB2Q8WWQ8 2551 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 TRAV18A0A075B6X5 111 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 TRBV9A0A0B4J1U6 114 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 LOC100506127A0A0U1RQW1 187 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 FAM223BA6NKX1 122 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 TEX22C9J3V5 150 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 PPP5D1E7EU14 171 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 E7EUB6 86 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 CREBL2O60519 120 aaPredicted RBP12.93□□□□□ -0.34
CCDC9-202ENST00000595659 IGHV3-23P01764 117 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 HLA-AP01891 365 aaKnown RBP12.93□□□□□ -0.34
CCDC9-202ENST00000595659 IL6RP08887 468 aaPredicted RBP12.93□□□□□ -0.34
CCDC9-202ENST00000595659 MYOD1P15172 320 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 EDN2P20800 178 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 EIF4EBP1Q13541 118 aaPredicted RBP12.93□□□□□ -0.34
CCDC9-202ENST00000595659 C15orf32Q32M92 178 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 ADAMTSL5Q6ZMM2 481 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 SSX9Q7RTT3 188 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 FAM223AQ8IWN6 122 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 MFSD4AQ8N468 514 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 OR4S2Q8NH73 311 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 SECTM1Q8WVN6 248 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 CITED4Q96RK1 184 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 THAP7Q9BT49 309 aaPredicted RBP12.93□□□□□ -0.34
CCDC9-202ENST00000595659 TUBA4BQ9H853 241 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 PALMDQ9NP74 551 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 S4R3C0 116 aa12.93□□□□□ -0.34
CCDC9-202ENST00000595659 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.92□□□□□ -0.34
CCDC9-202ENST00000595659 A8MZ25 164 aa12.92□□□□□ -0.34
CCDC9-202ENST00000595659 SLC22A5O76082 557 aa12.92□□□□□ -0.34
CCDC9-202ENST00000595659 OR2A4O95047 310 aa12.92□□□□□ -0.34
CCDC9-202ENST00000595659 FCGR2CP31995 323 aa12.92□□□□□ -0.34
CCDC9-202ENST00000595659 HAGHQ16775 308 aa12.92□□□□□ -0.34
CCDC9-202ENST00000595659 LCN12Q6JVE5 192 aa12.92□□□□□ -0.34
CCDC9-202ENST00000595659 GTSCR1Q86UQ5 136 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms