RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 OR2B11Q5JQS5 317 aa18.02■□□□□ 0.48
LSM4-204ENST00000594828 USMG5Q96IX5 58 aa18.02■□□□□ 0.48
LSM4-204ENST00000594828 ZNF430Q9H8G1 570 aaPredicted RBP18.02■□□□□ 0.48
LSM4-204ENST00000594828 A0A0A6YYH2 397 aa18.01■□□□□ 0.47
LSM4-204ENST00000594828 A6NJ64 397 aa18.01■□□□□ 0.47
LSM4-204ENST00000594828 ACTL6BO94805 426 aa18.01■□□□□ 0.47
LSM4-204ENST00000594828 OR9G9P0C7N8 305 aa18.01■□□□□ 0.47
LSM4-204ENST00000594828 SAA1P0DJI8 122 aaPredicted RBP18.01■□□□□ 0.47
LSM4-204ENST00000594828 ARPC4P59998 168 aa18.01■□□□□ 0.47
LSM4-204ENST00000594828 OVCH2Q7RTZ1 564 aa18.01■□□□□ 0.47
LSM4-204ENST00000594828 MMD2Q8IY49 270 aa18.01■□□□□ 0.47
LSM4-204ENST00000594828 ADAD2Q8NCV1 583 aaKnown RBP18.01■□□□□ 0.47
LSM4-204ENST00000594828 BEST4Q8NFU0 473 aa18.01■□□□□ 0.47
LSM4-204ENST00000594828 HSD17B10Q99714 261 aaKnown RBP18.01■□□□□ 0.47
LSM4-204ENST00000594828 DIABLOQ9NR28 239 aa18.01■□□□□ 0.47
LSM4-204ENST00000594828 SPATA2Q9UM82 520 aa18.01■□□□□ 0.47
LSM4-204ENST00000594828 DEFA5Q01523 94 aa18■□□□□ 0.47
LSM4-204ENST00000594828 ZNF343Q6P1L6 599 aa18■□□□□ 0.47
LSM4-204ENST00000594828 GVQW1Q8N7I0 195 aa18■□□□□ 0.47
LSM4-204ENST00000594828 TCTEX1D2Q8WW35 142 aa18■□□□□ 0.47
LSM4-204ENST00000594828 PEF1Q9UBV8 284 aaKnown RBP18■□□□□ 0.47
LSM4-204ENST00000594828 TMEM127O75204 238 aa17.99■□□□□ 0.47
LSM4-204ENST00000594828 DYRK1AQ13627 763 aa17.99■□□□□ 0.47
LSM4-204ENST00000594828 KLF5Q13887 457 aaPredicted RBP17.99■□□□□ 0.47
LSM4-204ENST00000594828 TIMM50Q3ZCQ8 353 aa17.99■□□□□ 0.47
LSM4-204ENST00000594828 HOGA1Q86XE5 327 aa17.99■□□□□ 0.47
LSM4-204ENST00000594828 MFSD4AQ8N468 514 aa17.99■□□□□ 0.47
LSM4-204ENST00000594828 OR4S2Q8NH73 311 aa17.99■□□□□ 0.47
LSM4-204ENST00000594828 SPIN2AQ99865 258 aa17.99■□□□□ 0.47
LSM4-204ENST00000594828 SPIN2BQ9BPZ2 258 aa17.99■□□□□ 0.47
LSM4-204ENST00000594828 RSRP1Q9BUV0 290 aa17.99■□□□□ 0.47
LSM4-204ENST00000594828 SORL1Q92673 2214 aa17.98■□□□□ 0.47
LSM4-204ENST00000594828 FCGR2CP31995 323 aa17.98■□□□□ 0.47
LSM4-204ENST00000594828 EIF4EBP1Q13541 118 aaPredicted RBP17.98■□□□□ 0.47
LSM4-204ENST00000594828 ZNF66Q6ZN08 573 aa17.98■□□□□ 0.47
LSM4-204ENST00000594828 ANKRD13BQ86YJ7 626 aa17.98■□□□□ 0.47
LSM4-204ENST00000594828 VKORC1L1Q8N0U8 176 aa17.98■□□□□ 0.47
LSM4-204ENST00000594828 AUNIPQ9H7T9 357 aa17.98■□□□□ 0.47
LSM4-204ENST00000594828 TAS2R8Q9NYW2 309 aa17.98■□□□□ 0.47
LSM4-204ENST00000594828 RBMXL2O75526 392 aaKnown RBP17.97■□□□□ 0.47
LSM4-204ENST00000594828 IGLV1-51P01701 117 aa17.97■□□□□ 0.47
LSM4-204ENST00000594828 PTHLHP12272 177 aa17.97■□□□□ 0.47
LSM4-204ENST00000594828 HAPLN4Q86UW8 402 aa17.97■□□□□ 0.47
LSM4-204ENST00000594828 CROCCP3Q8IVE0 287 aa17.97■□□□□ 0.47
LSM4-204ENST00000594828 VSTM2AQ8TAG5 236 aa17.97■□□□□ 0.47
LSM4-204ENST00000594828 SECTM1Q8WVN6 248 aa17.97■□□□□ 0.47
LSM4-204ENST00000594828 CCL28Q9NRJ3 127 aa17.97■□□□□ 0.47
LSM4-204ENST00000594828 OR2A4O95047 310 aa17.96■□□□□ 0.47
LSM4-204ENST00000594828 TRBV12-3P01733 135 aa17.96■□□□□ 0.47
LSM4-204ENST00000594828 PRH1P02810 166 aa17.96■□□□□ 0.47
LSM4-204ENST00000594828 SYNJ2BPP57105 145 aa17.96■□□□□ 0.47
LSM4-204ENST00000594828 BRWD1-AS2P59051 145 aa17.96■□□□□ 0.47
LSM4-204ENST00000594828 TATDN3Q17R31 274 aa17.96■□□□□ 0.47
LSM4-204ENST00000594828 C10orf55Q5SWW7 151 aa17.96■□□□□ 0.47
LSM4-204ENST00000594828 TTC9CQ8N5M4 171 aa17.96■□□□□ 0.47
LSM4-204ENST00000594828 OR9G4Q8NGQ1 327 aa17.96■□□□□ 0.47
LSM4-204ENST00000594828 OR2A7Q96R45 310 aa17.96■□□□□ 0.47
LSM4-204ENST00000594828 FAM223BA6NKX1 122 aa17.95■□□□□ 0.46
LSM4-204ENST00000594828 TRIM64CA6NLI5 447 aa17.95■□□□□ 0.46
LSM4-204ENST00000594828 AIREO43918 545 aa17.95■□□□□ 0.46
LSM4-204ENST00000594828 FCER2P06734 321 aa17.95■□□□□ 0.46
LSM4-204ENST00000594828 TGFBR1P36897 503 aa17.95■□□□□ 0.46
LSM4-204ENST00000594828 RHOGP84095 191 aa17.95■□□□□ 0.46
LSM4-204ENST00000594828 ATP5G2Q06055 141 aa17.95■□□□□ 0.46
LSM4-204ENST00000594828 FAM223AQ8IWN6 122 aa17.95■□□□□ 0.46
LSM4-204ENST00000594828 OR13F1Q8NGS4 319 aa17.95■□□□□ 0.46
LSM4-204ENST00000594828 SNAPC3Q92966 411 aa17.95■□□□□ 0.46
LSM4-204ENST00000594828 S100A16Q96FQ6 103 aaKnown RBP17.95■□□□□ 0.46
LSM4-204ENST00000594828 GPHA2Q96T91 129 aa17.95■□□□□ 0.46
LSM4-204ENST00000594828 AKIP1Q9NQ31 210 aa17.95■□□□□ 0.46
LSM4-204ENST00000594828 TRBV9A0A0B4J1U6 114 aa17.94■□□□□ 0.46
LSM4-204ENST00000594828 TNFSF12O43508 249 aa17.94■□□□□ 0.46
LSM4-204ENST00000594828 KBTBD11O94819 623 aa17.94■□□□□ 0.46
LSM4-204ENST00000594828 PPYP01298 95 aa17.94■□□□□ 0.46
LSM4-204ENST00000594828 KIR2DS2P43631 304 aa17.94■□□□□ 0.46
LSM4-204ENST00000594828 CBX5P45973 191 aa17.94■□□□□ 0.46
LSM4-204ENST00000594828 ZNF45Q02386 682 aa17.94■□□□□ 0.46
LSM4-204ENST00000594828 MSMO1Q15800 293 aa17.94■□□□□ 0.46
LSM4-204ENST00000594828 RPEL1Q2QD12 228 aa17.94■□□□□ 0.46
LSM4-204ENST00000594828 SLC25A42Q86VD7 318 aa17.94■□□□□ 0.46
LSM4-204ENST00000594828 SBSPONQ8IVN8 264 aa17.94■□□□□ 0.46
LSM4-204ENST00000594828 PUSL1Q8N0Z8 303 aaKnown RBP17.94■□□□□ 0.46
LSM4-204ENST00000594828 ZBTB34Q8NCN2 500 aa17.94■□□□□ 0.46
LSM4-204ENST00000594828 TMEM167AQ8TBQ9 72 aa17.94■□□□□ 0.46
LSM4-204ENST00000594828 VCX3AQ9NNX9 186 aa17.94■□□□□ 0.46
LSM4-204ENST00000594828 TNCP24821 2201 aa17.94■□□□□ 0.46
LSM4-204ENST00000594828 A0A087WXM4 84 aa17.93■□□□□ 0.46
LSM4-204ENST00000594828 XRCC3O43542 346 aa17.93■□□□□ 0.46
LSM4-204ENST00000594828 HRASP01112 189 aa17.93■□□□□ 0.46
LSM4-204ENST00000594828 FRMD6-AS1P0C7T7 363 aa17.93■□□□□ 0.46
LSM4-204ENST00000594828 RPS19P39019 145 aaKnown RBP17.93■□□□□ 0.46
LSM4-204ENST00000594828 IL34Q6ZMJ4 242 aa17.93■□□□□ 0.46
LSM4-204ENST00000594828 TSPAN14Q8NG11 270 aa17.93■□□□□ 0.46
LSM4-204ENST00000594828 OR5AP2Q8NGF4 316 aa17.93■□□□□ 0.46
LSM4-204ENST00000594828 YIPF6Q96EC8 236 aa17.93■□□□□ 0.46
LSM4-204ENST00000594828 SLC5A7Q9GZV3 580 aa17.93■□□□□ 0.46
LSM4-204ENST00000594828 ADAM30Q9UKF2 790 aa17.93■□□□□ 0.46
LSM4-204ENST00000594828 HMX3A6NHT5 357 aa17.92■□□□□ 0.46
LSM4-204ENST00000594828 MAS1LP35410 378 aa17.92■□□□□ 0.46
LSM4-204ENST00000594828 LSM3P62310 102 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms