RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 PYHIN1Q6K0P9 492 aa11.38□□□□□ -0.59
VRK3-206ENST00000594090 IDO2Q6ZQW0 420 aa11.38□□□□□ -0.59
VRK3-206ENST00000594090 TCTEX1D1Q8N7M0 179 aa11.38□□□□□ -0.59
VRK3-206ENST00000594090 MINDY2Q8NBR6 621 aa11.38□□□□□ -0.59
VRK3-206ENST00000594090 GRPEL2Q8TAA5 225 aa11.38□□□□□ -0.59
VRK3-206ENST00000594090 MYOZ3Q8TDC0 251 aa11.38□□□□□ -0.59
VRK3-206ENST00000594090 FOXA2Q9Y261 457 aaPredicted RBP11.38□□□□□ -0.59
VRK3-206ENST00000594090 NUBP2Q9Y5Y2 271 aa11.38□□□□□ -0.59
VRK3-206ENST00000594090 VWFP04275 2813 aa11.38□□□□□ -0.59
VRK3-206ENST00000594090 PKD1L1Q8TDX9 2849 aa11.38□□□□□ -0.59
VRK3-206ENST00000594090 M0QYG6 137 aa11.37□□□□□ -0.59
VRK3-206ENST00000594090 CNIH1O95406 144 aa11.37□□□□□ -0.59
VRK3-206ENST00000594090 TBPP20226 339 aa11.37□□□□□ -0.59
VRK3-206ENST00000594090 IL18Q14116 193 aa11.37□□□□□ -0.59
VRK3-206ENST00000594090 AADACL3Q5VUY0 350 aa11.37□□□□□ -0.59
VRK3-206ENST00000594090 C8orf86Q6ZUL3 223 aa11.37□□□□□ -0.59
VRK3-206ENST00000594090 LFNGQ8NES3 379 aa11.37□□□□□ -0.59
VRK3-206ENST00000594090 OR51H1Q8NH63 302 aa11.37□□□□□ -0.59
VRK3-206ENST00000594090 SMIM4Q8WVI0 70 aa11.37□□□□□ -0.59
VRK3-206ENST00000594090 KLK15Q9H2R5 256 aa11.37□□□□□ -0.59
VRK3-206ENST00000594090 RABL2AQ9UBK7 228 aaPredicted RBP11.37□□□□□ -0.59
VRK3-206ENST00000594090 RABL2BQ9UNT1 228 aa11.37□□□□□ -0.59
VRK3-206ENST00000594090 PLXNB1O43157 2135 aa11.37□□□□□ -0.59
VRK3-206ENST00000594090 CMYA5Q8N3K9 4069 aa11.37□□□□□ -0.59
VRK3-206ENST00000594090 CTDSPLO15194 276 aa11.36□□□□□ -0.59
VRK3-206ENST00000594090 RBFOX2O43251 390 aaKnown RBP eCLIP11.36□□□□□ -0.59
VRK3-206ENST00000594090 SOX15O60248 233 aa11.36□□□□□ -0.59
VRK3-206ENST00000594090 RAMP3O60896 148 aa11.36□□□□□ -0.59
VRK3-206ENST00000594090 CD3DP04234 171 aa11.36□□□□□ -0.59
VRK3-206ENST00000594090 PRSS8Q16651 343 aa11.36□□□□□ -0.59
VRK3-206ENST00000594090 AKIRIN2Q53H80 203 aa11.36□□□□□ -0.59
VRK3-206ENST00000594090 RNASE10Q5GAN6 216 aaKnown RBP11.36□□□□□ -0.59
VRK3-206ENST00000594090 TMEM65Q6PI78 240 aa11.36□□□□□ -0.59
VRK3-206ENST00000594090 UNQ5815/PRO19632Q6UWF5 114 aa11.36□□□□□ -0.59
VRK3-206ENST00000594090 ETV3LQ6ZN32 361 aa11.36□□□□□ -0.59
VRK3-206ENST00000594090 ZNF695Q8IW36 515 aa11.36□□□□□ -0.59
VRK3-206ENST00000594090 VKORC1L1Q8N0U8 176 aa11.36□□□□□ -0.59
VRK3-206ENST00000594090 SPAG16Q8N0X2 631 aa11.36□□□□□ -0.59
VRK3-206ENST00000594090 TMEM229BQ8NBD8 167 aa11.36□□□□□ -0.59
VRK3-206ENST00000594090 TINAGL1Q9GZM7 467 aaPredicted RBP11.36□□□□□ -0.59
VRK3-206ENST00000594090 GPR31O00270 319 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 CREBL2O60519 120 aaPredicted RBP11.35□□□□□ -0.59
VRK3-206ENST00000594090 HRASP01112 189 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 RLN1P04808 185 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 TNFSF8P32971 234 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 CDX1P47902 265 aaPredicted RBP11.35□□□□□ -0.59
VRK3-206ENST00000594090 TAS2R19P59542 299 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 SSBP1Q04837 148 aaKnown RBP11.35□□□□□ -0.59
VRK3-206ENST00000594090 CMTM1Q8IZ96 169 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 PUSL1Q8N0Z8 303 aaKnown RBP11.35□□□□□ -0.59
VRK3-206ENST00000594090 OR5M8Q8NGP6 311 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 VSTM2AQ8TAG5 236 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 ZNF430Q9H8G1 570 aaPredicted RBP11.35□□□□□ -0.59
VRK3-206ENST00000594090 PGLYRP1O75594 196 aaPredicted RBP11.35□□□□□ -0.59
VRK3-206ENST00000594090 KBTBD11O94819 623 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 CD74P04233 296 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 IFNA6P05013 189 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 RAB9AP51151 201 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 UCP3P55916 312 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 KIAA0141Q14154 515 aaPredicted RBP11.35□□□□□ -0.59
VRK3-206ENST00000594090 TNXAQ16473 311 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 LHFPL1Q86WI0 220 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 MMD2Q8IY49 270 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 ARRDC1Q8N5I2 433 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 POC5Q8NA72 575 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 OR4D10Q8NGI6 311 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 CASTOR1Q8WTX7 329 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 C4orf3Q8WVX3 66 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 RHOVQ96L33 236 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 SOSTQ9BQB4 213 aa11.35□□□□□ -0.59
VRK3-206ENST00000594090 MGAM2Q2M2H8 2515 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 OR2A4O95047 310 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 RAB3DO95716 219 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 HPRT1P00492 218 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 CD33P20138 364 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 MYCNOSP40205 109 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 DEFB136Q30KP8 78 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 PHLDA2Q53GA4 152 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 ASPHD1Q5U4P2 390 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 STEAP1BQ6NZ63 245 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 LPCAT3Q6P1A2 487 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 SSX9Q7RTT3 188 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 SLC38A6Q8IZM9 456 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 LINC00482Q8N8I6 264 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 ZNF491Q8N8L2 437 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 CD300LFQ8TDQ1 290 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 SRSF12Q8WXF0 261 aaKnown RBP11.34□□□□□ -0.59
VRK3-206ENST00000594090 UBE2E2Q96LR5 201 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 DUX3Q96PT4 197 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 OR2A7Q96R45 310 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 P2RX4Q99571 388 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 RSRP1Q9BUV0 290 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 GNB4Q9HAV0 340 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 PLEKHA2Q9HB19 425 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 NBEAL1Q6ZS30 2694 aa11.34□□□□□ -0.59
VRK3-206ENST00000594090 FABP12A6NFH5 140 aa11.33□□□□□ -0.6
VRK3-206ENST00000594090 G3V4G9 280 aa11.33□□□□□ -0.6
VRK3-206ENST00000594090 CCL24O00175 119 aa11.33□□□□□ -0.6
VRK3-206ENST00000594090 GSTZ1O43708 216 aaPredicted RBP11.33□□□□□ -0.6
VRK3-206ENST00000594090 ACTL6BO94805 426 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms