RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 RNASEK-C17orf49H0YIS7 233 aa10.89□□□□□ -0.67
VMP1-217ENST00000593168 APOA2P02652 100 aa10.89□□□□□ -0.67
VMP1-217ENST00000593168 P0C879 139 aa10.89□□□□□ -0.67
VMP1-217ENST00000593168 EPHA1P21709 976 aa10.89□□□□□ -0.67
VMP1-217ENST00000593168 GATA3P23771 443 aa10.89□□□□□ -0.67
VMP1-217ENST00000593168 MC5RP33032 325 aa10.89□□□□□ -0.67
VMP1-217ENST00000593168 CEACAM3P40198 252 aa10.89□□□□□ -0.67
VMP1-217ENST00000593168 SRSF2Q01130 221 aaKnown RBP10.89□□□□□ -0.67
VMP1-217ENST00000593168 PRB3Q04118 309 aaPredicted RBP10.89□□□□□ -0.67
VMP1-217ENST00000593168 DIAPH2-AS1Q14236 149 aa10.89□□□□□ -0.67
VMP1-217ENST00000593168 POU2AF1Q16633 256 aa10.89□□□□□ -0.67
VMP1-217ENST00000593168 RTL8BQ17RB0 113 aa10.89□□□□□ -0.67
VMP1-217ENST00000593168 C11orf87Q6NUJ2 197 aa10.89□□□□□ -0.67
VMP1-217ENST00000593168 TMEM65Q6PI78 240 aa10.89□□□□□ -0.67
VMP1-217ENST00000593168 OR4D5Q8NGN0 318 aa10.89□□□□□ -0.67
VMP1-217ENST00000593168 LPAR2Q9HBW0 351 aa10.89□□□□□ -0.67
VMP1-217ENST00000593168 COA4Q9NYJ1 87 aa10.89□□□□□ -0.67
VMP1-217ENST00000593168 CDC42EP3Q9UKI2 254 aa10.89□□□□□ -0.67
VMP1-217ENST00000593168 TRAV20A0A0B4J274 112 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 OOSP1A8MZH6 123 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 H0YJW9 148 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 PITX3O75364 302 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 KRASP01116 189 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 LYL1P12980 280 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 NQO2P16083 231 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 G6PCP35575 357 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 REG1BP48304 166 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 UBE2E1P51965 193 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 NKX2-5P52952 324 aaPredicted RBP10.88□□□□□ -0.67
VMP1-217ENST00000593168 ID3Q02535 119 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 KLRD1Q13241 179 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 RAB32Q13637 225 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 SMCO1Q147U7 214 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 TMEM249Q2WGJ8 235 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 LRRC37A5PQ49AS3 106 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 TPTE2P1Q5T6R2 138 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 MINOS1Q5TGZ0 78 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 Q6ZRM9 215 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 PDPNQ86YL7 162 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 LINC01356Q8N9X3 169 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 OSR1Q8TAX0 266 aaPredicted RBP10.88□□□□□ -0.67
VMP1-217ENST00000593168 THAP6Q8TBB0 222 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 RPEQ96AT9 228 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 R3HDM4Q96D70 268 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 AIFM2Q9BRQ8 373 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 C19orf24Q9BVV8 132 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 WASHC3Q9Y3C0 194 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 TBL2Q9Y4P3 447 aaKnown RBP10.88□□□□□ -0.67
VMP1-217ENST00000593168 MINOS1-NBL1R4GNA1 71 aa10.88□□□□□ -0.67
VMP1-217ENST00000593168 IGHV1-3A0A0C4DH29 117 aa10.87□□□□□ -0.67
VMP1-217ENST00000593168 MARCH11A6NNE9 402 aa10.87□□□□□ -0.67
VMP1-217ENST00000593168 FAM90A9PA6NNJ1 464 aa10.87□□□□□ -0.67
VMP1-217ENST00000593168 ST8SIA3O43173 380 aa10.87□□□□□ -0.67
VMP1-217ENST00000593168 CRYZL1O95825 349 aa10.87□□□□□ -0.67
VMP1-217ENST00000593168 HRASP01112 189 aa10.87□□□□□ -0.67
VMP1-217ENST00000593168 PET100P0DJ07 73 aa10.87□□□□□ -0.67
VMP1-217ENST00000593168 NKX2-1P43699 371 aaPredicted RBP10.87□□□□□ -0.67
VMP1-217ENST00000593168 RAB13P51153 203 aa10.87□□□□□ -0.67
VMP1-217ENST00000593168 LGALS4P56470 323 aa10.87□□□□□ -0.67
VMP1-217ENST00000593168 ERVK-16P61578 105 aa10.87□□□□□ -0.67
VMP1-217ENST00000593168 MIDNQ504T8 468 aa10.87□□□□□ -0.67
VMP1-217ENST00000593168 TMEM177Q53S58 311 aa10.87□□□□□ -0.67
VMP1-217ENST00000593168 LDLRAD2Q5SZI1 272 aa10.87□□□□□ -0.67
VMP1-217ENST00000593168 PRSS54Q6PEW0 395 aa10.87□□□□□ -0.67
VMP1-217ENST00000593168 H2BFWTQ7Z2G1 175 aa10.87□□□□□ -0.67
VMP1-217ENST00000593168 OR8H3Q8N146 312 aa10.87□□□□□ -0.67
VMP1-217ENST00000593168 LHX4Q969G2 390 aa10.87□□□□□ -0.67
VMP1-217ENST00000593168 RNF126Q9BV68 326 aa10.87□□□□□ -0.67
VMP1-217ENST00000593168 H0YIZ8 118 aa10.86□□□□□ -0.67
VMP1-217ENST00000593168 H7C2Y5 167 aa10.86□□□□□ -0.67
VMP1-217ENST00000593168 MBPP02686 304 aaPredicted RBP10.86□□□□□ -0.67
VMP1-217ENST00000593168 RLN2P04090 185 aa10.86□□□□□ -0.67
VMP1-217ENST00000593168 ZNF546Q86UE3 836 aa10.86□□□□□ -0.67
VMP1-217ENST00000593168 DMBX1Q8NFW5 382 aa10.86□□□□□ -0.67
VMP1-217ENST00000593168 OR4C13Q8NGP0 309 aa10.86□□□□□ -0.67
VMP1-217ENST00000593168 OR1S1Q8NH92 325 aa10.86□□□□□ -0.67
VMP1-217ENST00000593168 FLYWCH2Q96CP2 140 aaKnown RBP10.86□□□□□ -0.67
VMP1-217ENST00000593168 RHOVQ96L33 236 aa10.86□□□□□ -0.67
VMP1-217ENST00000593168 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.86□□□□□ -0.67
VMP1-217ENST00000593168 TMEM160Q9NX00 188 aa10.86□□□□□ -0.67
VMP1-217ENST00000593168 CACNG5Q9UF02 275 aa10.86□□□□□ -0.67
VMP1-217ENST00000593168 AUP1Q9Y679 476 aa10.86□□□□□ -0.67
VMP1-217ENST00000593168 POMT1Q9Y6A1 747 aa10.86□□□□□ -0.67
VMP1-217ENST00000593168 FXYD6-FXYD2A0A087WZ82 144 aa10.85□□□□□ -0.67
VMP1-217ENST00000593168 CENPVL3A0A0U1RRI6 287 aa10.85□□□□□ -0.67
VMP1-217ENST00000593168 A0A1W2PPI3 338 aa10.85□□□□□ -0.67
VMP1-217ENST00000593168 FAM90A26D6RGX4 464 aa10.85□□□□□ -0.67
VMP1-217ENST00000593168 K7EPK0 472 aa10.85□□□□□ -0.67
VMP1-217ENST00000593168 DEDDO75618 318 aa10.85□□□□□ -0.67
VMP1-217ENST00000593168 IGKV1-16P04430 117 aa10.85□□□□□ -0.67
VMP1-217ENST00000593168 IL6RP08887 468 aaPredicted RBP10.85□□□□□ -0.67
VMP1-217ENST00000593168 S100A10P60903 97 aa10.85□□□□□ -0.67
VMP1-217ENST00000593168 HABP2Q14520 560 aaPredicted RBP10.85□□□□□ -0.67
VMP1-217ENST00000593168 IZUMO4Q1ZYL8 232 aa10.85□□□□□ -0.67
VMP1-217ENST00000593168 LGALSLQ3ZCW2 172 aaPredicted RBP10.85□□□□□ -0.67
VMP1-217ENST00000593168 CXorf66Q5JRM2 361 aaPredicted RBP10.85□□□□□ -0.67
VMP1-217ENST00000593168 LAMTOR1Q6IAA8 161 aa10.85□□□□□ -0.67
VMP1-217ENST00000593168 CCDC144NLQ6NUI1 221 aa10.85□□□□□ -0.67
VMP1-217ENST00000593168 MOB3BQ86TA1 216 aa10.85□□□□□ -0.67
VMP1-217ENST00000593168 C9orf62Q8N4C0 152 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms