RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 CASTOR1Q8WTX7 329 aa9.25□□□□□ -0.93
H3F3B-212ENST00000592643 TCTEX1D2Q8WW35 142 aa9.25□□□□□ -0.93
H3F3B-212ENST00000592643 FCAMRQ8WWV6 532 aa9.25□□□□□ -0.93
H3F3B-212ENST00000592643 DGCR14Q96DF8 476 aaKnown RBP9.25□□□□□ -0.93
H3F3B-212ENST00000592643 TNCP24821 2201 aa9.24□□□□□ -0.93
H3F3B-212ENST00000592643 TRAV41A0A0B4J266 112 aa9.24□□□□□ -0.93
H3F3B-212ENST00000592643 E7EUB6 86 aa9.24□□□□□ -0.93
H3F3B-212ENST00000592643 CSF1P09603 554 aa9.24□□□□□ -0.93
H3F3B-212ENST00000592643 FOXE3Q13461 319 aa9.24□□□□□ -0.93
H3F3B-212ENST00000592643 IL18Q14116 193 aa9.24□□□□□ -0.93
H3F3B-212ENST00000592643 PRSS8Q16651 343 aa9.24□□□□□ -0.93
H3F3B-212ENST00000592643 C10orf55Q5SWW7 151 aa9.24□□□□□ -0.93
H3F3B-212ENST00000592643 PUSL1Q8N0Z8 303 aaKnown RBP9.24□□□□□ -0.93
H3F3B-212ENST00000592643 TEX45Q8NA69 505 aa9.24□□□□□ -0.93
H3F3B-212ENST00000592643 ZBTB34Q8NCN2 500 aa9.24□□□□□ -0.93
H3F3B-212ENST00000592643 OR4X2Q8NGF9 303 aa9.24□□□□□ -0.93
H3F3B-212ENST00000592643 OR51H1Q8NH63 302 aa9.24□□□□□ -0.93
H3F3B-212ENST00000592643 TRIM63Q969Q1 353 aa9.24□□□□□ -0.93
H3F3B-212ENST00000592643 RSRP1Q9BUV0 290 aa9.24□□□□□ -0.93
H3F3B-212ENST00000592643 MMP27Q9H306 513 aa9.24□□□□□ -0.93
H3F3B-212ENST00000592643 ZNF430Q9H8G1 570 aaPredicted RBP9.24□□□□□ -0.93
H3F3B-212ENST00000592643 TSSC4Q9Y5U2 329 aaPredicted RBP9.24□□□□□ -0.93
H3F3B-212ENST00000592643 TET2Q6N021 2002 aaPredicted RBP9.24□□□□□ -0.93
H3F3B-212ENST00000592643 TRAV3A0A0B4J244 114 aa9.23□□□□□ -0.93
H3F3B-212ENST00000592643 FABP12A6NFH5 140 aa9.23□□□□□ -0.93
H3F3B-212ENST00000592643 CGB1A6NKQ9 187 aa9.23□□□□□ -0.93
H3F3B-212ENST00000592643 RBFOX2O43251 390 aaKnown RBP eCLIP9.23□□□□□ -0.931e-6■■■□□ 18.4
H3F3B-212ENST00000592643 RBMXL2O75526 392 aaKnown RBP9.23□□□□□ -0.93
H3F3B-212ENST00000592643 RLN1P04808 185 aa9.23□□□□□ -0.93
H3F3B-212ENST00000592643 MYOD1P15172 320 aa9.23□□□□□ -0.93
H3F3B-212ENST00000592643 PI3P19957 117 aa9.23□□□□□ -0.93
H3F3B-212ENST00000592643 UCP3P55916 312 aa9.23□□□□□ -0.93
H3F3B-212ENST00000592643 HERV-K104P61576 105 aa9.23□□□□□ -0.93
H3F3B-212ENST00000592643 MRPS10P82664 201 aaKnown RBP9.23□□□□□ -0.93
H3F3B-212ENST00000592643 FXYD3Q14802 87 aa9.23□□□□□ -0.93
H3F3B-212ENST00000592643 PLGLAQ15195 96 aa9.23□□□□□ -0.93
H3F3B-212ENST00000592643 PHLDA2Q53GA4 152 aa9.23□□□□□ -0.93
H3F3B-212ENST00000592643 STEAP1BQ6NZ63 245 aa9.23□□□□□ -0.93
H3F3B-212ENST00000592643 TEX38Q6PEX7 206 aa9.23□□□□□ -0.93
H3F3B-212ENST00000592643 SPAG16Q8N0X2 631 aa9.23□□□□□ -0.93
H3F3B-212ENST00000592643 LFNGQ8NES3 379 aa9.23□□□□□ -0.93
H3F3B-212ENST00000592643 OR6Q1Q8NGQ2 317 aa9.23□□□□□ -0.93
H3F3B-212ENST00000592643 PRKDCP78527 4128 aaKnown RBP9.22□□□□□ -0.93
H3F3B-212ENST00000592643 ANKRD20A5PA0PJZ0 165 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 A6NHS1 94 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 GPR31O00270 319 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 S1PR2O95136 353 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 IGKV1-39P01597 117 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 OPN1MWP04001 364 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 IGKV1D-39P04432 117 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 ELANEP08246 267 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 OPN1MW2P0DN77 364 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 OPN1MW3P0DN78 364 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 TBPP20226 339 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 VDAC1P21796 283 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 ETV6P41212 452 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 TSPAN5P62079 268 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 SSBP1Q04837 148 aaKnown RBP9.22□□□□□ -0.93
H3F3B-212ENST00000592643 POU2AF1Q16633 256 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 ECSCRQ19T08 205 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 AKIRIN2Q53H80 203 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 ACTBL2Q562R1 376 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 RNASE10Q5GAN6 216 aaKnown RBP9.22□□□□□ -0.93
H3F3B-212ENST00000592643 C8orf86Q6ZUL3 223 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 ARRDC1Q8N5I2 433 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 COMMD1Q8N668 190 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 OR4C16Q8NGL9 310 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 OR13C8Q8NGS7 320 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 OR4S2Q8NH73 311 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 GRPEL2Q8TAA5 225 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 C15orf40Q8WUR7 153 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 ARPC1AQ92747 370 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 R3HDM4Q96D70 268 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 SDHCQ99643 169 aaPredicted RBP9.22□□□□□ -0.93
H3F3B-212ENST00000592643 GNB4Q9HAV0 340 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 PRELID3BQ9Y3B1 194 aa9.22□□□□□ -0.93
H3F3B-212ENST00000592643 TEX22C9J3V5 150 aa9.21□□□□□ -0.94
H3F3B-212ENST00000592643 RAB3DO95716 219 aa9.21□□□□□ -0.94
H3F3B-212ENST00000592643 TAS2R19P59542 299 aa9.21□□□□□ -0.94
H3F3B-212ENST00000592643 GNB1P62873 340 aa9.21□□□□□ -0.94
H3F3B-212ENST00000592643 SLC35B1P78383 322 aa9.21□□□□□ -0.94
H3F3B-212ENST00000592643 KLF9Q13886 244 aaPredicted RBP9.21□□□□□ -0.94
H3F3B-212ENST00000592643 DEFB136Q30KP8 78 aa9.21□□□□□ -0.94
H3F3B-212ENST00000592643 VMA21Q3ZAQ7 101 aa9.21□□□□□ -0.94
H3F3B-212ENST00000592643 WFDC9Q8NEX5 89 aa9.21□□□□□ -0.94
H3F3B-212ENST00000592643 TMEM167AQ8TBQ9 72 aa9.21□□□□□ -0.94
H3F3B-212ENST00000592643 RAX2Q96IS3 184 aa9.21□□□□□ -0.94
H3F3B-212ENST00000592643 RHOVQ96L33 236 aa9.21□□□□□ -0.94
H3F3B-212ENST00000592643 DUX3Q96PT4 197 aa9.21□□□□□ -0.94
H3F3B-212ENST00000592643 FOXA2Q9Y261 457 aaPredicted RBP9.21□□□□□ -0.94
H3F3B-212ENST00000592643 A0A1W2PN81 502 aa9.2□□□□□ -0.94
H3F3B-212ENST00000592643 MSGN1A6NI15 193 aa9.2□□□□□ -0.94
H3F3B-212ENST00000592643 KBTBD11O94819 623 aa9.2□□□□□ -0.94
H3F3B-212ENST00000592643 OR2A4O95047 310 aa9.2□□□□□ -0.94
H3F3B-212ENST00000592643 APELAP0DMC3 54 aa9.2□□□□□ -0.94
H3F3B-212ENST00000592643 F2RP25116 425 aa9.2□□□□□ -0.94
H3F3B-212ENST00000592643 CHRNA7P36544 502 aa9.2□□□□□ -0.94
H3F3B-212ENST00000592643 KIR2DS2P43631 304 aa9.2□□□□□ -0.94
H3F3B-212ENST00000592643 CDX1P47902 265 aaPredicted RBP9.2□□□□□ -0.94
H3F3B-212ENST00000592643 RAB9AP51151 201 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms