RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 VSTM2AQ8TAG5 236 aa13□□□□□ -0.33
TRIM47-203ENST00000586495 HSD17B10Q99714 261 aaKnown RBP13□□□□□ -0.33
TRIM47-203ENST00000586495 SPIN2AQ99865 258 aa13□□□□□ -0.33
TRIM47-203ENST00000586495 SPIN2BQ9BPZ2 258 aa13□□□□□ -0.33
TRIM47-203ENST00000586495 ZNF430Q9H8G1 570 aaPredicted RBP13□□□□□ -0.33
TRIM47-203ENST00000586495 ETV7Q9Y603 341 aa13□□□□□ -0.33
TRIM47-203ENST00000586495 H0Y980 276 aa12.99□□□□□ -0.33
TRIM47-203ENST00000586495 FRMD6-AS1P0C7T7 363 aa12.99□□□□□ -0.33
TRIM47-203ENST00000586495 MXD1Q05195 221 aa12.99□□□□□ -0.33
TRIM47-203ENST00000586495 DYRK1AQ13627 763 aa12.99□□□□□ -0.33
TRIM47-203ENST00000586495 RPEL1Q2QD12 228 aa12.99□□□□□ -0.33
TRIM47-203ENST00000586495 OVCH2Q7RTZ1 564 aa12.99□□□□□ -0.33
TRIM47-203ENST00000586495 SLC25A42Q86VD7 318 aa12.99□□□□□ -0.33
TRIM47-203ENST00000586495 OR4S2Q8NH73 311 aa12.99□□□□□ -0.33
TRIM47-203ENST00000586495 TCTEX1D2Q8WW35 142 aa12.99□□□□□ -0.33
TRIM47-203ENST00000586495 SNAPC3Q92966 411 aa12.99□□□□□ -0.33
TRIM47-203ENST00000586495 ZMAT4Q9H898 229 aa12.99□□□□□ -0.33
TRIM47-203ENST00000586495 TNCP24821 2201 aa12.98□□□□□ -0.33
TRIM47-203ENST00000586495 A0A0A6YYH2 397 aa12.98□□□□□ -0.33
TRIM47-203ENST00000586495 IGKV1D-13A0A0B4J2D9 117 aa12.98□□□□□ -0.33
TRIM47-203ENST00000586495 LOC100506127A0A0U1RQW1 187 aa12.98□□□□□ -0.33
TRIM47-203ENST00000586495 A6NJ64 397 aa12.98□□□□□ -0.33
TRIM47-203ENST00000586495 FAM223BA6NKX1 122 aa12.98□□□□□ -0.33
TRIM47-203ENST00000586495 TRIM64CA6NLI5 447 aa12.98□□□□□ -0.33
TRIM47-203ENST00000586495 SSX5O60225 188 aa12.98□□□□□ -0.33
TRIM47-203ENST00000586495 CLEC2LP0C7M8 214 aa12.98□□□□□ -0.33
TRIM47-203ENST00000586495 IGKV1-13P0DP09 117 aa12.98□□□□□ -0.33
TRIM47-203ENST00000586495 SYNJ2BPP57105 145 aa12.98□□□□□ -0.33
TRIM47-203ENST00000586495 ARPC4P59998 168 aa12.98□□□□□ -0.33
TRIM47-203ENST00000586495 RPL30P62888 115 aaKnown RBP12.98□□□□□ -0.33
TRIM47-203ENST00000586495 DEFA5Q01523 94 aa12.98□□□□□ -0.33
TRIM47-203ENST00000586495 IDNKQ5T6J7 187 aa12.98□□□□□ -0.33
TRIM47-203ENST00000586495 ZNF66Q6ZN08 573 aa12.98□□□□□ -0.33
TRIM47-203ENST00000586495 HAPLN4Q86UW8 402 aa12.98□□□□□ -0.33
TRIM47-203ENST00000586495 FAM223AQ8IWN6 122 aa12.98□□□□□ -0.33
TRIM47-203ENST00000586495 BEST4Q8NFU0 473 aa12.98□□□□□ -0.33
TRIM47-203ENST00000586495 SPATA2Q9UM82 520 aa12.98□□□□□ -0.33
TRIM47-203ENST00000586495 TRAV18A0A075B6X5 111 aa12.97□□□□□ -0.33
TRIM47-203ENST00000586495 C3orf84H3BNL1 204 aa12.97□□□□□ -0.33
TRIM47-203ENST00000586495 TMEM127O75204 238 aa12.97□□□□□ -0.33
TRIM47-203ENST00000586495 OR2A4O95047 310 aa12.97□□□□□ -0.33
TRIM47-203ENST00000586495 IGLV2-14P01704 120 aa12.97□□□□□ -0.33
TRIM47-203ENST00000586495 ATP5G2Q06055 141 aa12.97□□□□□ -0.33
TRIM47-203ENST00000586495 OR2B11Q5JQS5 317 aa12.97□□□□□ -0.33
TRIM47-203ENST00000586495 SGPP2Q8IWX5 399 aa12.97□□□□□ -0.33
TRIM47-203ENST00000586495 MFSD4AQ8N468 514 aa12.97□□□□□ -0.33
TRIM47-203ENST00000586495 TTC9CQ8N5M4 171 aa12.97□□□□□ -0.33
TRIM47-203ENST00000586495 RCHY1Q96PM5 261 aa12.97□□□□□ -0.33
TRIM47-203ENST00000586495 OR2A7Q96R45 310 aa12.97□□□□□ -0.33
TRIM47-203ENST00000586495 DIABLOQ9NR28 239 aa12.97□□□□□ -0.33
TRIM47-203ENST00000586495 TRBV9A0A0B4J1U6 114 aa12.96□□□□□ -0.33
TRIM47-203ENST00000586495 KIR2DS2P43631 304 aa12.96□□□□□ -0.33
TRIM47-203ENST00000586495 RHOGP84095 191 aa12.96□□□□□ -0.33
TRIM47-203ENST00000586495 MSMO1Q15800 293 aa12.96□□□□□ -0.33
TRIM47-203ENST00000586495 NEDD8Q15843 81 aa12.96□□□□□ -0.33
TRIM47-203ENST00000586495 FAM209BQ5JX69 171 aa12.96□□□□□ -0.33
TRIM47-203ENST00000586495 HOGA1Q86XE5 327 aa12.96□□□□□ -0.33
TRIM47-203ENST00000586495 OR5H6Q8NGV6 325 aa12.96□□□□□ -0.33
TRIM47-203ENST00000586495 SLC25A38Q96DW6 304 aa12.96□□□□□ -0.33
TRIM47-203ENST00000586495 RNF167Q9H6Y7 350 aa12.96□□□□□ -0.33
TRIM47-203ENST00000586495 AKIP1Q9NQ31 210 aa12.96□□□□□ -0.33
TRIM47-203ENST00000586495 SIGLEC8Q9NYZ4 499 aa12.96□□□□□ -0.33
TRIM47-203ENST00000586495 PEMTQ9UBM1 199 aa12.96□□□□□ -0.33
TRIM47-203ENST00000586495 KBTBD11O94819 623 aa12.95□□□□□ -0.34
TRIM47-203ENST00000586495 HRASP01112 189 aa12.95□□□□□ -0.34
TRIM47-203ENST00000586495 TRBV12-3P01733 135 aa12.95□□□□□ -0.34
TRIM47-203ENST00000586495 IGHV4-30-4P0DP06 118 aa12.95□□□□□ -0.34
TRIM47-203ENST00000586495 FCGR2CP31995 323 aa12.95□□□□□ -0.34
TRIM47-203ENST00000586495 MAS1LP35410 378 aa12.95□□□□□ -0.34
TRIM47-203ENST00000586495 EIF4EBP1Q13541 118 aaPredicted RBP12.95□□□□□ -0.34
TRIM47-203ENST00000586495 EXOSC2Q13868 293 aaKnown RBP12.95□□□□□ -0.34
TRIM47-203ENST00000586495 TIMM50Q3ZCQ8 353 aa12.95□□□□□ -0.34
TRIM47-203ENST00000586495 KCTD21Q4G0X4 260 aa12.95□□□□□ -0.34
TRIM47-203ENST00000586495 IL34Q6ZMJ4 242 aa12.95□□□□□ -0.34
TRIM47-203ENST00000586495 Q8N1Y9 231 aa12.95□□□□□ -0.34
TRIM47-203ENST00000586495 NECAP1Q8NC96 275 aa12.95□□□□□ -0.34
TRIM47-203ENST00000586495 ZBTB34Q8NCN2 500 aa12.95□□□□□ -0.34
TRIM47-203ENST00000586495 TMEM167AQ8TBQ9 72 aa12.95□□□□□ -0.34
TRIM47-203ENST00000586495 SECTM1Q8WVN6 248 aa12.95□□□□□ -0.34
TRIM47-203ENST00000586495 AIFM2Q9BRQ8 373 aa12.95□□□□□ -0.34
TRIM47-203ENST00000586495 TAS2R8Q9NYW2 309 aa12.95□□□□□ -0.34
TRIM47-203ENST00000586495 DPPA5A6NC42 116 aa12.94□□□□□ -0.34
TRIM47-203ENST00000586495 A8MZ25 164 aa12.94□□□□□ -0.34
TRIM47-203ENST00000586495 AIREO43918 545 aa12.94□□□□□ -0.34
TRIM47-203ENST00000586495 RBMXL2O75526 392 aaKnown RBP12.94□□□□□ -0.34
TRIM47-203ENST00000586495 PRH1P02810 166 aa12.94□□□□□ -0.34
TRIM47-203ENST00000586495 CSN3P07498 182 aa12.94□□□□□ -0.34
TRIM47-203ENST00000586495 CBX5P45973 191 aa12.94□□□□□ -0.34
TRIM47-203ENST00000586495 RPL27AP46776 148 aaKnown RBP12.94□□□□□ -0.34
TRIM47-203ENST00000586495 C10orf55Q5SWW7 151 aa12.94□□□□□ -0.34
TRIM47-203ENST00000586495 LCN12Q6JVE5 192 aa12.94□□□□□ -0.34
TRIM47-203ENST00000586495 VKORC1L1Q8N0U8 176 aa12.94□□□□□ -0.34
TRIM47-203ENST00000586495 PUSL1Q8N0Z8 303 aaKnown RBP12.94□□□□□ -0.34
TRIM47-203ENST00000586495 Q8N402 240 aa12.94□□□□□ -0.34
TRIM47-203ENST00000586495 GVQW1Q8N7I0 195 aa12.94□□□□□ -0.34
TRIM47-203ENST00000586495 ZNF257Q9Y2Q1 563 aa12.94□□□□□ -0.34
TRIM47-203ENST00000586495 TENM3Q9P273 2699 aa12.93□□□□□ -0.34
TRIM47-203ENST00000586495 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.93□□□□□ -0.34
TRIM47-203ENST00000586495 PPYP01298 95 aa12.93□□□□□ -0.34
TRIM47-203ENST00000586495 ZNF45Q02386 682 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms