RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 WFDC10AQ9H1F0 79 aa13.7□□□□□ -0.22
TOP3A-220ENST00000585031 FBXL15Q9H469 300 aa13.7□□□□□ -0.22
TOP3A-220ENST00000585031 GNG12Q9UBI6 72 aa13.7□□□□□ -0.22
TOP3A-220ENST00000585031 MTFP1Q9UDX5 166 aa13.7□□□□□ -0.22
TOP3A-220ENST00000585031 DYNC1H1Q14204 4646 aaKnown RBP13.7□□□□□ -0.22
TOP3A-220ENST00000585031 A0A1W2PP11 408 aa13.69□□□□□ -0.22
TOP3A-220ENST00000585031 ANKRD20A5PA0PJZ0 165 aa13.69□□□□□ -0.22
TOP3A-220ENST00000585031 HBZP02008 142 aa13.69□□□□□ -0.22
TOP3A-220ENST00000585031 CSTBP04080 98 aaKnown RBP13.69□□□□□ -0.22
TOP3A-220ENST00000585031 CSN3P07498 182 aa13.69□□□□□ -0.22
TOP3A-220ENST00000585031 OR3A3P47888 321 aa13.69□□□□□ -0.22
TOP3A-220ENST00000585031 RBM11P57052 281 aaKnown RBP13.69□□□□□ -0.22
TOP3A-220ENST00000585031 TPPP2P59282 170 aa13.69□□□□□ -0.22
TOP3A-220ENST00000585031 ZNF660Q6AZW8 331 aaPredicted RBP13.69□□□□□ -0.22
TOP3A-220ENST00000585031 OR9G4Q8NGQ1 327 aa13.69□□□□□ -0.22
TOP3A-220ENST00000585031 OR10R2Q8NGX6 335 aa13.69□□□□□ -0.22
TOP3A-220ENST00000585031 NEDD4LQ96PU5 975 aa13.69□□□□□ -0.22
TOP3A-220ENST00000585031 ST6GALNAC5Q9BVH7 336 aa13.69□□□□□ -0.22
TOP3A-220ENST00000585031 LPAR5Q9H1C0 372 aa13.69□□□□□ -0.22
TOP3A-220ENST00000585031 ANKRD34BA5PLL1 514 aa13.68□□□□□ -0.22
TOP3A-220ENST00000585031 H0Y980 276 aa13.68□□□□□ -0.22
TOP3A-220ENST00000585031 RAB27BO00194 218 aa13.68□□□□□ -0.22
TOP3A-220ENST00000585031 ARPC1BO15143 372 aaKnown RBP13.68□□□□□ -0.22
TOP3A-220ENST00000585031 GSTP1P09211 210 aaKnown RBP13.68□□□□□ -0.22
TOP3A-220ENST00000585031 MGMTP16455 207 aa13.68□□□□□ -0.22
TOP3A-220ENST00000585031 SERPINA2P20848 420 aa13.68□□□□□ -0.22
TOP3A-220ENST00000585031 MECP2P51608 486 aaKnown RBP13.68□□□□□ -0.22
TOP3A-220ENST00000585031 RPS27AP62979 156 aaKnown RBP13.68□□□□□ -0.22
TOP3A-220ENST00000585031 EWSR1Q01844 656 aaKnown RBP eCLIP13.68□□□□□ -0.22
TOP3A-220ENST00000585031 MORN2Q502X0 79 aa13.68□□□□□ -0.22
TOP3A-220ENST00000585031 NHLRC3Q5JS37 347 aa13.68□□□□□ -0.22
TOP3A-220ENST00000585031 GTSCR1Q86UQ5 136 aa13.68□□□□□ -0.22
TOP3A-220ENST00000585031 PRR18Q8N4B5 295 aa13.68□□□□□ -0.22
TOP3A-220ENST00000585031 OR4K15Q8NH41 348 aa13.68□□□□□ -0.22
TOP3A-220ENST00000585031 GPX8Q8TED1 209 aa13.68□□□□□ -0.22
TOP3A-220ENST00000585031 IL36GQ9NZH8 169 aa13.68□□□□□ -0.22
TOP3A-220ENST00000585031 DNAH17Q9UFH2 4485 aa13.68□□□□□ -0.22
TOP3A-220ENST00000585031 DEDDO75618 318 aa13.67□□□□□ -0.22
TOP3A-220ENST00000585031 RCC1P18754 421 aaPredicted RBP13.67□□□□□ -0.22
TOP3A-220ENST00000585031 RCVRNP35243 200 aa13.67□□□□□ -0.22
TOP3A-220ENST00000585031 SYNJ2BPP57105 145 aa13.67□□□□□ -0.22
TOP3A-220ENST00000585031 CDNFQ49AH0 187 aa13.67□□□□□ -0.22
TOP3A-220ENST00000585031 ACTBL2Q562R1 376 aa13.67□□□□□ -0.22
TOP3A-220ENST00000585031 ATAD3CQ5T2N8 411 aa13.67□□□□□ -0.22
TOP3A-220ENST00000585031 UNQ5815/PRO19632Q6UWF5 114 aa13.67□□□□□ -0.22
TOP3A-220ENST00000585031 PPP1R27Q86WC6 154 aa13.67□□□□□ -0.22
TOP3A-220ENST00000585031 DEFB125Q8N687 156 aa13.67□□□□□ -0.22
TOP3A-220ENST00000585031 LFNGQ8NES3 379 aa13.67□□□□□ -0.22
TOP3A-220ENST00000585031 RAB3CQ96E17 227 aa13.67□□□□□ -0.22
TOP3A-220ENST00000585031 MRPS24Q96EL2 167 aaKnown RBP13.67□□□□□ -0.22
TOP3A-220ENST00000585031 TM2D1Q9BX74 207 aa13.67□□□□□ -0.22
TOP3A-220ENST00000585031 BANF2Q9H503 90 aa13.67□□□□□ -0.22
TOP3A-220ENST00000585031 CD7P09564 240 aa13.66□□□□□ -0.22
TOP3A-220ENST00000585031 PTHLHP12272 177 aa13.66□□□□□ -0.22
TOP3A-220ENST00000585031 GTF2F2P13984 249 aa13.66□□□□□ -0.22
TOP3A-220ENST00000585031 GNG2P59768 71 aa13.66□□□□□ -0.22
TOP3A-220ENST00000585031 MOGAT2Q3SYC2 334 aa13.66□□□□□ -0.22
TOP3A-220ENST00000585031 AKIRIN2Q53H80 203 aa13.66□□□□□ -0.22
TOP3A-220ENST00000585031 FAM89BQ8N5H3 189 aa13.66□□□□□ -0.22
TOP3A-220ENST00000585031 TCTEX1D1Q8N7M0 179 aa13.66□□□□□ -0.22
TOP3A-220ENST00000585031 OR52L2PQ8NGH6 319 aa13.66□□□□□ -0.22
TOP3A-220ENST00000585031 SELENOIQ9C0D9 397 aa13.66□□□□□ -0.22
TOP3A-220ENST00000585031 RANGRFQ9HD47 186 aaPredicted RBP13.66□□□□□ -0.22
TOP3A-220ENST00000585031 HRASLSQ9HDD0 168 aa13.66□□□□□ -0.22
TOP3A-220ENST00000585031 KLK11Q9UBX7 282 aa13.66□□□□□ -0.22
TOP3A-220ENST00000585031 TMEM235A6NFC5 223 aa13.65□□□□□ -0.22
TOP3A-220ENST00000585031 RRHO14718 337 aa13.65□□□□□ -0.22
TOP3A-220ENST00000585031 SPINT2O43291 252 aa13.65□□□□□ -0.22
TOP3A-220ENST00000585031 TRBV12-3P01733 135 aa13.65□□□□□ -0.22
TOP3A-220ENST00000585031 TRGV3P03979 118 aa13.65□□□□□ -0.22
TOP3A-220ENST00000585031 AKAIN1P0CW23 69 aa13.65□□□□□ -0.22
TOP3A-220ENST00000585031 HIST1H1DP16402 221 aaKnown RBP13.65□□□□□ -0.22
TOP3A-220ENST00000585031 PPP1CCP36873 323 aaKnown RBP13.65□□□□□ -0.22
TOP3A-220ENST00000585031 CBX5P45973 191 aa13.65□□□□□ -0.22
TOP3A-220ENST00000585031 TAS2R19P59542 299 aa13.65□□□□□ -0.22
TOP3A-220ENST00000585031 DEFA5Q01523 94 aa13.65□□□□□ -0.22
TOP3A-220ENST00000585031 PMS2P11Q13670 270 aa13.65□□□□□ -0.22
TOP3A-220ENST00000585031 ZNF833PQ6ZTB9 187 aa13.65□□□□□ -0.22
TOP3A-220ENST00000585031 CADM3Q8N126 398 aa13.65□□□□□ -0.22
TOP3A-220ENST00000585031 TMEM229BQ8NBD8 167 aa13.65□□□□□ -0.22
TOP3A-220ENST00000585031 NEK7Q8TDX7 302 aa13.65□□□□□ -0.22
TOP3A-220ENST00000585031 ABHD5Q8WTS1 349 aa13.65□□□□□ -0.22
TOP3A-220ENST00000585031 CLCC1Q96S66 551 aa13.65□□□□□ -0.22
TOP3A-220ENST00000585031 MARVELD1Q9BSK0 173 aa13.65□□□□□ -0.22
TOP3A-220ENST00000585031 IFT46Q9NQC8 304 aa13.65□□□□□ -0.22
TOP3A-220ENST00000585031 ZNF785A8K8V0 405 aa13.64□□□□□ -0.23
TOP3A-220ENST00000585031 INMT-MINDY4F8WBC2 141 aa13.64□□□□□ -0.23
TOP3A-220ENST00000585031 DHFRP00374 187 aa13.64□□□□□ -0.23
TOP3A-220ENST00000585031 ZP3P21754 424 aa13.64□□□□□ -0.23
TOP3A-220ENST00000585031 CD81P60033 236 aa13.64□□□□□ -0.23
TOP3A-220ENST00000585031 ZNF554Q86TJ5 538 aa13.64□□□□□ -0.23
TOP3A-220ENST00000585031 GAPTQ8N292 157 aa13.64□□□□□ -0.23
TOP3A-220ENST00000585031 Q96M66 194 aa13.64□□□□□ -0.23
TOP3A-220ENST00000585031 NEURL2Q9BR09 285 aa13.64□□□□□ -0.23
TOP3A-220ENST00000585031 NICN1Q9BSH3 213 aa13.64□□□□□ -0.23
TOP3A-220ENST00000585031 ABHD14AQ9BUJ0 271 aa13.64□□□□□ -0.23
TOP3A-220ENST00000585031 TRAPPC2LQ9UL33 140 aa13.64□□□□□ -0.23
TOP3A-220ENST00000585031 SAA2-SAA4A0A096LPE2 208 aa13.63□□□□□ -0.23
TOP3A-220ENST00000585031 A0A0A6YYD4 124 aa13.63□□□□□ -0.23
TOP3A-220ENST00000585031 SOCS1O15524 211 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms