RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, human

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NF1-222	ENST00000582892	ZNF497	Q6ZNH5	498 aa		6.08	□□□□□ -1.44
NF1-222	ENST00000582892	MYPOP	Q86VE0	399 aa	Predicted RBP	6.08	□□□□□ -1.44
NF1-222	ENST00000582892	TMEM252	Q8N6L7	170 aa		6.08	□□□□□ -1.44
NF1-222	ENST00000582892	TCTEX1D1	Q8N7M0	179 aa		6.08	□□□□□ -1.44
NF1-222	ENST00000582892	BOLL	Q8N9W6	283 aa	Known RBP	6.08	□□□□□ -1.44
NF1-222	ENST00000582892	ZBTB34	Q8NCN2	500 aa		6.08	□□□□□ -1.44
NF1-222	ENST00000582892	C1orf162	Q8NEQ5	155 aa	Predicted RBP	6.08	□□□□□ -1.44
NF1-222	ENST00000582892	OR8U1	Q8NH10	309 aa		6.08	□□□□□ -1.44
NF1-222	ENST00000582892	OR10J5	Q8NHC4	309 aa		6.08	□□□□□ -1.44
NF1-222	ENST00000582892	NEK7	Q8TDX7	302 aa		6.08	□□□□□ -1.44
NF1-222	ENST00000582892	SECTM1	Q8WVN6	248 aa		6.08	□□□□□ -1.44
NF1-222	ENST00000582892	PARD6G	Q9BYG4	376 aa	Predicted RBP	6.08	□□□□□ -1.44
NF1-222	ENST00000582892	SLC35B3	Q9H1N7	401 aa		6.08	□□□□□ -1.44
NF1-222	ENST00000582892	BIN3	Q9NQY0	253 aa		6.08	□□□□□ -1.44
NF1-222	ENST00000582892	MLX	Q9UH92	298 aa		6.08	□□□□□ -1.44
NF1-222	ENST00000582892	RNF150	Q9ULK6	438 aa		6.08	□□□□□ -1.44
NF1-222	ENST00000582892	WIPI2	Q9Y4P8	454 aa		6.08	□□□□□ -1.44
NF1-222	ENST00000582892	MMP24	Q9Y5R2	645 aa		6.08	□□□□□ -1.44
NF1-222	ENST00000582892	STAB2	Q8WWQ8	2551 aa		6.08	□□□□□ -1.44
NF1-222	ENST00000582892	PCLO	Q9Y6V0	5065 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	IGKV1D-13	A0A0B4J2D9	117 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	IGHV1-18	A0A0C4DH31	117 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	IQCF6	A8MYZ5	107 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892		B9A039	149 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	ADAM20	O43506	726 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	SYNGR1	O43759	233 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	NDUFS6	O75380	124 aa	Known RBP	6.07	□□□□□ -1.44
NF1-222	ENST00000582892	SCAF4	O95104	1147 aa	Known RBP	6.07	□□□□□ -1.44
NF1-222	ENST00000582892	HBE1	P02100	147 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	IFNA4	P05014	189 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	PGA5	P0DJD9	388 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	IGKV1-13	P0DP09	117 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	ZNF14	P17017	642 aa	Predicted RBP	6.07	□□□□□ -1.44
NF1-222	ENST00000582892	CCNO	P22674	350 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	COL8A2	P25067	703 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	MAS1L	P35410	378 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	RAB13	P51153	203 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	AKR1C2	P52895	323 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	RPL23A	P62750	156 aa	Known RBP	6.07	□□□□□ -1.44
NF1-222	ENST00000582892	SUMO1	P63165	101 aa	Known RBP	6.07	□□□□□ -1.44
NF1-222	ENST00000582892	PAX5	Q02548	391 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	NHLH2	Q02577	135 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	AKR1C1	Q04828	323 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	ZNF146	Q15072	292 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	HIKESHI	Q53FT3	197 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	MDP1	Q86V88	176 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	KIR3DL3	Q8N743	410 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	OR10V1	Q8NGI7	309 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	OR10G4	Q8NGN3	311 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	OR1J1	Q8NGS3	322 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	FAM110D	Q8TAY7	271 aa	Predicted RBP	6.07	□□□□□ -1.44
NF1-222	ENST00000582892	PLPPR1	Q8TBJ4	325 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	ATP5S	Q99766	215 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	SMIM3	Q9BZL3	60 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	RAB1B	Q9H0U4	201 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	SEBOX	Q9HB31	216 aa	Predicted RBP	6.07	□□□□□ -1.44
NF1-222	ENST00000582892	CDH20	Q9HBT6	801 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	OBP2B	Q9NPH6	170 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	CCL28	Q9NRJ3	127 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	LIN7C	Q9NUP9	197 aa	Known RBP	6.07	□□□□□ -1.44
NF1-222	ENST00000582892	COA4	Q9NYJ1	87 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	KIAA1456	Q9P272	454 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	FAM96B	Q9Y3D0	163 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	WSB1	Q9Y6I7	421 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892	DNAH7	Q8WXX0	4024 aa		6.07	□□□□□ -1.44
NF1-222	ENST00000582892		A0A1B0GWJ7	208 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	IGSF23	A1L1A6	192 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	FAM24A	A6NFZ4	105 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	COLCA2	A8K830	154 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	WRB	O00258	174 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	SH2D1B	O14796	132 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	SIGLEC5	O15389	551 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	TXNL1	O43396	289 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	LY86	O95711	162 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	PRH1	P02810	166 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	MT-ND4L	P03901	98 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	SERPINE2	P07093	398 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	GPR6	P46095	362 aa	Predicted RBP	6.06	□□□□□ -1.44
NF1-222	ENST00000582892	SULT1A1	P50225	295 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	ARHGDIB	P52566	201 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	RAB2A	P61019	212 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	RAB5B	P61020	215 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	PPP1CB	P62140	327 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	ZNF616	Q08AN1	781 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	PMS2P11	Q13670	270 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	CLINT1	Q14677	625 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	EFNB3	Q15768	340 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	ETV3L	Q6ZN32	361 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	STX12	Q86Y82	276 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	CBLN2	Q8IUK8	224 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	C17orf78	Q8N4C9	275 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	RBMXL1	Q96E39	390 aa	Known RBP	6.06	□□□□□ -1.44
NF1-222	ENST00000582892	MALSU1	Q96EH3	234 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	BSCL2	Q96G97	398 aa	Predicted RBP	6.06	□□□□□ -1.44
NF1-222	ENST00000582892	CITED1	Q99966	193 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	PSMG3	Q9BT73	122 aa	Predicted RBP	6.06	□□□□□ -1.44
NF1-222	ENST00000582892	TMEM231	Q9H6L2	316 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	HES4	Q9HCC6	221 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	TAAR3P	Q9P1P4	343 aa		6.06	□□□□□ -1.44
NF1-222	ENST00000582892	HERC2	O95714	4834 aa		6.05	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms