RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 CDK10Q15131 360 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 MRGPRG-AS1Q2M3A8 158 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 CASC10Q5T4H9 136 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 HACD4Q5VWC8 232 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 LCN12Q6JVE5 192 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 ZNF343Q6P1L6 599 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 Q6ZS49 121 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 GTSCR1Q86UQ5 136 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 VKORC1L1Q8N0U8 176 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 Q8N1Y9 231 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 ADAD2Q8NCV1 583 aaKnown RBP7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 LGALS14Q8TCE9 139 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 TCTEX1D2Q8WW35 142 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 SNAPC3Q92966 411 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 YTHDF1Q9BYJ9 559 aaKnown RBP7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 TUBA4BQ9H853 241 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 ZNF430Q9H8G1 570 aaPredicted RBP7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 AKIP1Q9NQ31 210 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 SSR3Q9UNL2 185 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 OR2W1Q9Y3N9 320 aa7.03□□□□□ -1.28
CDK5RAP3-211ENST00000578996 DPPA5A6NC42 116 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 FAM223BA6NKX1 122 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 TNFSF12O43508 249 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 OR2J3O76001 311 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 SCGNO76038 276 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 TNFAIP8O95379 198 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 CSN3P07498 182 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 GALP22466 123 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 ARPC4P59998 168 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 RPL30P62888 115 aaKnown RBP7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 MXD1Q05195 221 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 UBE2UQ5VVX9 321 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 ZFAND6Q6FIF0 208 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 SFXN4Q6P4A7 337 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 CNIH2Q6PI25 160 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 SSX9Q7RTT3 188 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 FAM223AQ8IWN6 122 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 MMD2Q8IY49 270 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 SPARTQ8N0X7 666 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 FYTTD1Q96QD9 318 aaKnown RBP7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 SPIN2AQ99865 258 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 SPIN2BQ9BPZ2 258 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 DCSTAMPQ9H295 470 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 TAS2R8Q9NYW2 309 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 PEMTQ9UBM1 199 aa7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 RBMX2Q9Y388 322 aaKnown RBP7.02□□□□□ -1.29
CDK5RAP3-211ENST00000578996 IGKV1D-13A0A0B4J2D9 117 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 IZUMO1RA6ND01 250 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 HMX3A6NHT5 357 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 PPP5D1E7EU14 171 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 BMPR1BO00238 502 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 MRPS14O60783 128 aaKnown RBP7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 SLC22A5O76082 557 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 OR2A4O95047 310 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 BRI3O95415 125 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 IGHV3-23P01764 117 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 HLA-DQB1P01920 261 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 FCER2P06734 321 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 IGKV1-13P0DP09 117 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 ZNF45Q02386 682 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 C15orf32Q32M92 178 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 IL34Q6ZMJ4 242 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 C19orf35Q6ZS72 473 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 TPRA1Q86W33 373 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 Q8N402 240 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 OR4S2Q8NH73 311 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 VSTM2AQ8TAG5 236 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 DYNLRB2Q8TF09 96 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 SECTM1Q8WVN6 248 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 FCGR1BQ92637 280 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 ISOC1Q96CN7 298 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 CITED4Q96RK1 184 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 GPHA2Q96T91 129 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 TM2D3Q9BRN9 247 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 OR51E2Q9H255 320 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 C19orf73Q9NVV2 129 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 ANXA10Q9UJ72 324 aa7.01□□□□□ -1.29
CDK5RAP3-211ENST00000578996 LOC100506127A0A0U1RQW1 187 aa7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 SSX5O60225 188 aa7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 KBTBD11O94819 623 aa7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 IGLV2-14P01704 120 aa7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 HLA-AP01891 365 aaKnown RBP7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 CLEC2LP0C7M8 214 aa7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 FGF9P31371 208 aaPredicted RBP7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 SDC2P34741 201 aa7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 RPL27AP46776 148 aaKnown RBP7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 CD81P60033 236 aa7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 KCTD21Q4G0X4 260 aa7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 IDNKQ5T6J7 187 aa7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 SLC25A42Q86VD7 318 aa7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 MFSD4AQ8N468 514 aa7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 TTC9CQ8N5M4 171 aa7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 GVQW1Q8N7I0 195 aa7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 NECAP1Q8NC96 275 aa7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 OR2A7Q96R45 310 aa7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 HSD17B10Q99714 261 aaKnown RBP7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 SPATA25Q9BR10 227 aa7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 RNF167Q9H6Y7 350 aa7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 PLEKHA3Q9HB20 300 aa7□□□□□ -1.29
CDK5RAP3-211ENST00000578996 RHBDL2Q9NX52 303 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms