RNA–Protein interactions for RNA: ENST00000576241.1

CCDC40-216, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-216ENST00000576241 DYRK1AQ13627 763 aa10.47□□□□□ -0.73
CCDC40-216ENST00000576241 RPEL1Q2QD12 228 aa10.47□□□□□ -0.73
CCDC40-216ENST00000576241 UBE2UQ5VVX9 321 aa10.47□□□□□ -0.73
CCDC40-216ENST00000576241 KCTD9Q7L273 389 aa10.47□□□□□ -0.73
CCDC40-216ENST00000576241 ADAD2Q8NCV1 583 aaKnown RBP10.47□□□□□ -0.73
CCDC40-216ENST00000576241 SRSF12Q8WXF0 261 aaKnown RBP10.47□□□□□ -0.73
CCDC40-216ENST00000576241 FCGR1BQ92637 280 aa10.47□□□□□ -0.73
CCDC40-216ENST00000576241 SPIN2AQ99865 258 aa10.47□□□□□ -0.73
CCDC40-216ENST00000576241 SPIN2BQ9BPZ2 258 aa10.47□□□□□ -0.73
CCDC40-216ENST00000576241 DCSTAMPQ9H295 470 aa10.47□□□□□ -0.73
CCDC40-216ENST00000576241 TXNL4BQ9NX01 149 aaKnown RBP10.47□□□□□ -0.73
CCDC40-216ENST00000576241 OR2W1Q9Y3N9 320 aa10.47□□□□□ -0.73
CCDC40-216ENST00000576241 FAM223BA6NKX1 122 aa10.46□□□□□ -0.73
CCDC40-216ENST00000576241 FCGR3BO75015 233 aa10.46□□□□□ -0.73
CCDC40-216ENST00000576241 TUSC2O75896 110 aa10.46□□□□□ -0.73
CCDC40-216ENST00000576241 SLC22A5O76082 557 aa10.46□□□□□ -0.73
CCDC40-216ENST00000576241 SAA1P0DJI8 122 aaPredicted RBP10.46□□□□□ -0.73
CCDC40-216ENST00000576241 GNG2P59768 71 aa10.46□□□□□ -0.73
CCDC40-216ENST00000576241 CDK10Q15131 360 aa10.46□□□□□ -0.73
CCDC40-216ENST00000576241 MRGPRG-AS1Q2M3A8 158 aa10.46□□□□□ -0.73
CCDC40-216ENST00000576241 TPRA1Q86W33 373 aa10.46□□□□□ -0.73
CCDC40-216ENST00000576241 FAM223AQ8IWN6 122 aa10.46□□□□□ -0.73
CCDC40-216ENST00000576241 SNAPC3Q92966 411 aa10.46□□□□□ -0.73
CCDC40-216ENST00000576241 Q9H521 79 aa10.46□□□□□ -0.73
CCDC40-216ENST00000576241 ZNF430Q9H8G1 570 aaPredicted RBP10.46□□□□□ -0.73
CCDC40-216ENST00000576241 DAPK2Q9UIK4 370 aa10.46□□□□□ -0.73
CCDC40-216ENST00000576241 SSR3Q9UNL2 185 aa10.46□□□□□ -0.73
CCDC40-216ENST00000576241 HUWE1Q7Z6Z7 4374 aaKnown RBP10.46□□□□□ -0.74
CCDC40-216ENST00000576241 TMEM235A6NFC5 223 aa10.45□□□□□ -0.74
CCDC40-216ENST00000576241 OR2A4O95047 310 aa10.45□□□□□ -0.74
CCDC40-216ENST00000576241 TRBV12-3P01733 135 aa10.45□□□□□ -0.74
CCDC40-216ENST00000576241 HLA-DQB1P01920 261 aa10.45□□□□□ -0.74
CCDC40-216ENST00000576241 NFYAP23511 347 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-216ENST00000576241 RHOGP84095 191 aa10.45□□□□□ -0.74
CCDC40-216ENST00000576241 EXOSC2Q13868 293 aaKnown RBP10.45□□□□□ -0.74
CCDC40-216ENST00000576241 OR2B11Q5JQS5 317 aa10.45□□□□□ -0.74
CCDC40-216ENST00000576241 LCN12Q6JVE5 192 aa10.45□□□□□ -0.74
CCDC40-216ENST00000576241 CNIH2Q6PI25 160 aa10.45□□□□□ -0.74
CCDC40-216ENST00000576241 GTSCR1Q86UQ5 136 aa10.45□□□□□ -0.74
CCDC40-216ENST00000576241 MMD2Q8IY49 270 aa10.45□□□□□ -0.74
CCDC40-216ENST00000576241 SPARTQ8N0X7 666 aa10.45□□□□□ -0.74
CCDC40-216ENST00000576241 Q8N1Y9 231 aa10.45□□□□□ -0.74
CCDC40-216ENST00000576241 NUDCD2Q8WVJ2 157 aa10.45□□□□□ -0.74
CCDC40-216ENST00000576241 PEMTQ9UBM1 199 aa10.45□□□□□ -0.74
CCDC40-216ENST00000576241 RBMX2Q9Y388 322 aaKnown RBP10.45□□□□□ -0.74
CCDC40-216ENST00000576241 RRP15Q9Y3B9 282 aaKnown RBP10.45□□□□□ -0.74
CCDC40-216ENST00000576241 STARD9Q9P2P6 4700 aa10.45□□□□□ -0.74
CCDC40-216ENST00000576241 ATP5G2Q06055 141 aa10.44□□□□□ -0.74
CCDC40-216ENST00000576241 ZFAND6Q6FIF0 208 aa10.44□□□□□ -0.74
CCDC40-216ENST00000576241 SFXN4Q6P4A7 337 aa10.44□□□□□ -0.74
CCDC40-216ENST00000576241 IL34Q6ZMJ4 242 aa10.44□□□□□ -0.74
CCDC40-216ENST00000576241 ADAMTSL5Q6ZMM2 481 aa10.44□□□□□ -0.74
CCDC40-216ENST00000576241 SLC25A42Q86VD7 318 aa10.44□□□□□ -0.74
CCDC40-216ENST00000576241 Q8N402 240 aa10.44□□□□□ -0.74
CCDC40-216ENST00000576241 OR4S2Q8NH73 311 aa10.44□□□□□ -0.74
CCDC40-216ENST00000576241 LGALS14Q8TCE9 139 aa10.44□□□□□ -0.74
CCDC40-216ENST00000576241 TCTEX1D2Q8WW35 142 aa10.44□□□□□ -0.74
CCDC40-216ENST00000576241 HSD17B10Q99714 261 aaKnown RBP10.44□□□□□ -0.74
CCDC40-216ENST00000576241 TM2D3Q9BRN9 247 aa10.44□□□□□ -0.74
CCDC40-216ENST00000576241 AKIP1Q9NQ31 210 aa10.44□□□□□ -0.74
CCDC40-216ENST00000576241 SIGLEC8Q9NYZ4 499 aa10.44□□□□□ -0.74
CCDC40-216ENST00000576241 ANXA10Q9UJ72 324 aa10.44□□□□□ -0.74
CCDC40-216ENST00000576241 RBMY1BA6NDE4 496 aaKnown RBP10.43□□□□□ -0.74
CCDC40-216ENST00000576241 RBMY1EA6NEQ0 496 aaKnown RBP10.43□□□□□ -0.74
CCDC40-216ENST00000576241 A8MZ25 164 aa10.43□□□□□ -0.74
CCDC40-216ENST00000576241 AIREO43918 545 aa10.43□□□□□ -0.74
CCDC40-216ENST00000576241 PRH1P02810 166 aa10.43□□□□□ -0.74
CCDC40-216ENST00000576241 RBMY1DP0C7P1 496 aaKnown RBP10.43□□□□□ -0.74
CCDC40-216ENST00000576241 FAM209BQ5JX69 171 aa10.43□□□□□ -0.74
CCDC40-216ENST00000576241 C10orf55Q5SWW7 151 aa10.43□□□□□ -0.74
CCDC40-216ENST00000576241 NECAP1Q8NC96 275 aa10.43□□□□□ -0.74
CCDC40-216ENST00000576241 VSTM2AQ8TAG5 236 aa10.43□□□□□ -0.74
CCDC40-216ENST00000576241 YTHDF1Q9BYJ9 559 aaKnown RBP10.43□□□□□ -0.74
CCDC40-216ENST00000576241 OR51E2Q9H255 320 aa10.43□□□□□ -0.74
CCDC40-216ENST00000576241 TUBA4BQ9H853 241 aa10.43□□□□□ -0.74
CCDC40-216ENST00000576241 C19orf73Q9NVV2 129 aa10.43□□□□□ -0.74
CCDC40-216ENST00000576241 RHBDL2Q9NX52 303 aa10.43□□□□□ -0.74
CCDC40-216ENST00000576241 ADAM30Q9UKF2 790 aa10.43□□□□□ -0.74
CCDC40-216ENST00000576241 SPATA2Q9UM82 520 aa10.43□□□□□ -0.74
CCDC40-216ENST00000576241 TRBV9A0A0B4J1U6 114 aa10.42□□□□□ -0.74
CCDC40-216ENST00000576241 IGKV1D-13A0A0B4J2D9 117 aa10.42□□□□□ -0.74
CCDC40-216ENST00000576241 DPPA5A6NC42 116 aa10.42□□□□□ -0.74
CCDC40-216ENST00000576241 RBMXL2O75526 392 aaKnown RBP10.42□□□□□ -0.74
CCDC40-216ENST00000576241 ATP6V1G2O95670 118 aa10.42□□□□□ -0.74
CCDC40-216ENST00000576241 CSN3P07498 182 aa10.42□□□□□ -0.74
CCDC40-216ENST00000576241 IGKV1-13P0DP09 117 aa10.42□□□□□ -0.74
CCDC40-216ENST00000576241 ARPC4P59998 168 aa10.42□□□□□ -0.74
CCDC40-216ENST00000576241 RPL30P62888 115 aaKnown RBP10.42□□□□□ -0.74
CCDC40-216ENST00000576241 VKORC1L1Q8N0U8 176 aa10.42□□□□□ -0.74
CCDC40-216ENST00000576241 TTC9CQ8N5M4 171 aa10.42□□□□□ -0.74
CCDC40-216ENST00000576241 OR2K2Q8NGT1 345 aa10.42□□□□□ -0.74
CCDC40-216ENST00000576241 OR2A7Q96R45 310 aa10.42□□□□□ -0.74
CCDC40-216ENST00000576241 CITED4Q96RK1 184 aa10.42□□□□□ -0.74
CCDC40-216ENST00000576241 BMPR1BO00238 502 aa10.41□□□□□ -0.74
CCDC40-216ENST00000576241 SSX5O60225 188 aa10.41□□□□□ -0.74
CCDC40-216ENST00000576241 KBTBD11O94819 623 aa10.41□□□□□ -0.74
CCDC40-216ENST00000576241 IGLV2-14P01704 120 aa10.41□□□□□ -0.74
CCDC40-216ENST00000576241 SDC2P34741 201 aa10.41□□□□□ -0.74
CCDC40-216ENST00000576241 SCAND1P57086 179 aa10.41□□□□□ -0.74
CCDC40-216ENST00000576241 ZNF45Q02386 682 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms