RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 SLA2Q9H6Q3 261 aa6.3□□□□□ -1.4
CCDC40-215ENST00000576033 C14orf166Q9Y224 244 aaKnown RBP6.3□□□□□ -1.4
CCDC40-215ENST00000576033 LINC01548A6NM66 108 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 FAM90A9PA6NNJ1 464 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 CT45A6P0DMU7 189 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 CT45A5P0DMU8 189 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 CT45A7P0DMV0 189 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 SLC25A4P12235 298 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 PGAM2P15259 253 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 TMEM11P17152 192 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 VAMP1P23763 118 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 GNRHRP30968 328 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 CEACAM3P40198 252 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 DYNLT3P51808 116 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 F2RL1P55085 397 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 FXYD4P59646 89 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 TMEM187Q14656 261 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 OR2B11Q5JQS5 317 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 TMEM65Q6PI78 240 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 Q8N6K4 173 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 C8orf31Q8N9H6 132 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 ZNF383Q8NA42 475 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 LINC01006Q8NI28 216 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 COQ8AQ8NI60 647 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 EAF1Q96JC9 268 aaPredicted RBP6.29□□□□□ -1.4
CCDC40-215ENST00000576033 NAA60Q9H7X0 242 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 SLC2A9Q9NRM0 540 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 TPSG1Q9NRR2 321 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 SDHAF2Q9NX18 166 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 LINC00527Q9UJ94 153 aa6.29□□□□□ -1.4
CCDC40-215ENST00000576033 LINC00473A8K010 186 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 H0YJW9 148 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 M0R1X1 148 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 TNFSF12O43508 249 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 OR2F2O95006 317 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 GAPDHP04406 335 aaKnown RBP6.28□□□□□ -1.4
CCDC40-215ENST00000576033 IGKV1-16P04430 117 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 LYL1P12980 280 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 RPA2P15927 270 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 CXCL2P19875 107 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 GPR12P47775 334 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 RAB7AP51149 207 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 PIGPP57054 158 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 HERV-K104P61576 105 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 RPL30P62888 115 aaKnown RBP6.28□□□□□ -1.4
CCDC40-215ENST00000576033 MSMO1Q15800 293 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 AANATQ16613 207 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 TMEM30BQ3MIR4 351 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 ABCA11PQ4W5N1 156 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 KCTD9Q7L273 389 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 SGPP2Q8IWX5 399 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 OR8H3Q8N146 312 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 C5orf56Q8N8D9 126 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 BVESQ8NE79 360 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 OR10J5Q8NHC4 309 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 GRPEL2Q8TAA5 225 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 CASTOR1Q8WTX7 329 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 WFDC12Q8WWY7 111 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 RBM14Q96PK6 669 aaKnown RBP6.28□□□□□ -1.4
CCDC40-215ENST00000576033 HSPB9Q9BQS6 159 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 NMES1Q9C002 83 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 SERTAD4Q9NUC0 356 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 OR2W1Q9Y3N9 320 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 HSPB11Q9Y547 144 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 NBEAL1Q6ZS30 2694 aa6.28□□□□□ -1.4
CCDC40-215ENST00000576033 GPR31O00270 319 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 CCSO14618 274 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 PLXNB1O43157 2135 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 NDUFA7O95182 113 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 CRYBA1P05813 215 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 IL3RAP26951 378 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 PROK1P58294 105 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 CYCSP99999 105 aaKnown RBP6.27□□□□□ -1.41
CCDC40-215ENST00000576033 NDPQ00604 133 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 TAGLNQ01995 201 aaKnown RBP6.27□□□□□ -1.41
CCDC40-215ENST00000576033 FGL1Q08830 312 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 EIF4EBP1Q13541 118 aaPredicted RBP6.27□□□□□ -1.41
CCDC40-215ENST00000576033 ZNF345Q14585 488 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 C9orf152Q5JTZ5 239 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 LIN54Q6MZP7 749 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 C11orf88Q6PI97 169 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 C12orf54Q6X4T0 127 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 LIAT1Q6ZQX7 453 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 Q8N9W7 124 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 CCDC71LQ8N9Z2 235 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 GLYATL2Q8WU03 294 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 TMEM56Q96MV1 263 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 NOL4LQ96MY1 436 aaPredicted RBP6.27□□□□□ -1.41
CCDC40-215ENST00000576033 CCL28Q9NRJ3 127 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 PAIP2BQ9ULR5 123 aaKnown RBP6.27□□□□□ -1.41
CCDC40-215ENST00000576033 TNFSF18Q9UNG2 199 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 MOB4Q9Y3A3 225 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 TMEM56-RWDD3S4R434 201 aa6.27□□□□□ -1.41
CCDC40-215ENST00000576033 CLPSL1A2RUU4 121 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 NCBP2LA6PVI3 153 aaKnown RBP6.26□□□□□ -1.41
CCDC40-215ENST00000576033 MPTX1A8MV57 137 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 OOSP1A8MZH6 123 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 RAB29O14966 203 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 MPPED1O15442 326 aa6.26□□□□□ -1.41
CCDC40-215ENST00000576033 ADAP1O75689 374 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms