RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 ST6GALNAC5Q9BVH7 336 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 ELL3Q9HB65 397 aaPredicted RBP6.73□□□□□ -1.33
TCF4-246ENST00000570287 FKBP11Q9NYL4 201 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 BOKQ9UMX3 212 aaPredicted RBP6.73□□□□□ -1.33
TCF4-246ENST00000570287 MMP7P09237 267 aaPredicted RBP6.73□□□□□ -1.33
TCF4-246ENST00000570287 ZNF32P17041 273 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 ATP6V0CP27449 155 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 MPLP40238 635 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 RPL29P47914 159 aaKnown RBP6.73□□□□□ -1.33
TCF4-246ENST00000570287 CLDN15P56746 228 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 CLDN18P56856 261 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 DMRTC1Q5HYR2 192 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 TMEM45BQ96B21 275 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 C18orf12Q96KH6 178 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 OR2J1Q9GZK6 312 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 AK3Q9UIJ7 227 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 PINLYPA6NC86 204 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 CDIPTO14735 213 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 TNFSF13O75888 250 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 PSG4Q00888 419 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 CEACAM16Q2WEN9 425 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 TMEM42Q69YG0 159 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 ASCL4Q6XD76 172 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 ZNF100Q8IYN0 542 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 OR51G1Q8NGK1 321 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 OR2G3Q8NGZ4 309 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 OR2AE1Q8NHA4 323 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 AGMATQ9BSE5 352 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 OR2H1Q9GZK4 316 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 ARRDC1-AS1Q9H2J1 176 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 EHFQ9NZC4 300 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 PPP1R3CQ9UQK1 317 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 C14orf166Q9Y224 244 aaKnown RBP6.73□□□□□ -1.33
TCF4-246ENST00000570287 RCL1Q9Y2P8 373 aaKnown RBP6.73□□□□□ -1.33
TCF4-246ENST00000570287 FRYLO94915 3013 aa6.73□□□□□ -1.33
TCF4-246ENST00000570287 VPS13AQ96RL7 3174 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 PCSK5Q92824 1860 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 LGALS7P47929 136 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 RPS20P60866 119 aaKnown RBP6.72□□□□□ -1.33
TCF4-246ENST00000570287 EWSR1Q01844 656 aaKnown RBP eCLIP6.72□□□□□ -1.33
TCF4-246ENST00000570287 COL5A1-AS1Q5SY13 56 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 PLCXD3Q63HM9 321 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 TMEM105Q8N8V8 129 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 OR4D5Q8NGN0 318 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 NEU4Q8WWR8 484 aaPredicted RBP6.72□□□□□ -1.33
TCF4-246ENST00000570287 MOB3AQ96BX8 217 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 CYYR1Q96J86 154 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 P2RX4Q99571 388 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 TECTAO75443 2155 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 LOC105371242A0A075B767 164 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 IGKV3D-15A0A087WSY6 115 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 TRBV7-9A0A0J9YWB2 115 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 A0A1B0GV50 99 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 TRIAP1O43715 76 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 HBE1P02100 147 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 DUSP1P28562 367 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 TMEM187Q14656 261 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 RSPO4Q2I0M5 234 aaPredicted RBP6.72□□□□□ -1.33
TCF4-246ENST00000570287 ACOT6Q3I5F7 207 aaPredicted RBP6.72□□□□□ -1.33
TCF4-246ENST00000570287 RNASEKQ6P5S7 137 aaKnown RBP6.72□□□□□ -1.33
TCF4-246ENST00000570287 ZNF880Q6PDB4 577 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 LYG1Q8N1E2 194 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 ZFP62Q8NB50 900 aaPredicted RBP6.72□□□□□ -1.33
TCF4-246ENST00000570287 ORAOV1Q8WV07 137 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 BORCS8Q96FH0 119 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 FAM173AQ9BQD7 235 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 VPS25Q9BRG1 176 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 PLEKHJ1Q9NW61 149 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 MYO7BQ6PIF6 2116 aa6.72□□□□□ -1.33
TCF4-246ENST00000570287 C21orf140B9A014 251 aa6.71□□□□□ -1.33
TCF4-246ENST00000570287 SDCBPO00560 298 aaPredicted RBP6.71□□□□□ -1.33
TCF4-246ENST00000570287 ASCL1P50553 236 aa6.71□□□□□ -1.33
TCF4-246ENST00000570287 GNB2P62879 340 aa6.71□□□□□ -1.33
TCF4-246ENST00000570287 SPINK14Q6IE38 97 aa6.71□□□□□ -1.33
TCF4-246ENST00000570287 C6orf201Q7Z4U5 140 aa6.71□□□□□ -1.33
TCF4-246ENST00000570287 PIGCQ92535 297 aa6.71□□□□□ -1.33
TCF4-246ENST00000570287 B4GALT7Q9UBV7 327 aa6.71□□□□□ -1.33
TCF4-246ENST00000570287 ZDBF2Q9HCK1 2354 aa6.71□□□□□ -1.34
TCF4-246ENST00000570287 IGKV1-27A0A075B6S5 117 aa6.71□□□□□ -1.34
TCF4-246ENST00000570287 TRAV26-1A0A087WT03 109 aa6.71□□□□□ -1.34
TCF4-246ENST00000570287 hCG_38984A0A1B0GV85 526 aa6.71□□□□□ -1.34
TCF4-246ENST00000570287 NEURL1O76050 574 aa6.71□□□□□ -1.34
TCF4-246ENST00000570287 NRASP01111 189 aa6.71□□□□□ -1.34
TCF4-246ENST00000570287 CD55P08174 381 aa6.71□□□□□ -1.34
TCF4-246ENST00000570287 PATE4P0C8F1 98 aa6.71□□□□□ -1.34
TCF4-246ENST00000570287 FUT6P51993 359 aa6.71□□□□□ -1.34
TCF4-246ENST00000570287 UBE2NP61088 152 aaKnown RBP6.71□□□□□ -1.34
TCF4-246ENST00000570287 RPL23AP62750 156 aaKnown RBP6.71□□□□□ -1.34
TCF4-246ENST00000570287 RANP62826 216 aaKnown RBP6.71□□□□□ -1.34
TCF4-246ENST00000570287 SSBP2P81877 361 aaPredicted RBP6.71□□□□□ -1.34
TCF4-246ENST00000570287 ZNF92Q03936 586 aa6.71□□□□□ -1.34
TCF4-246ENST00000570287 OR5I1Q13606 314 aa6.71□□□□□ -1.34
TCF4-246ENST00000570287 ABHD17BQ5VST6 288 aa6.71□□□□□ -1.34
TCF4-246ENST00000570287 POM121L2Q96KW2 1035 aa6.71□□□□□ -1.34
TCF4-246ENST00000570287 LINC00470Q9BZP3 86 aa6.71□□□□□ -1.34
TCF4-246ENST00000570287 IL36GQ9NZH8 169 aa6.71□□□□□ -1.34
TCF4-246ENST00000570287 MCTS1Q9ULC4 181 aaKnown RBP6.71□□□□□ -1.34
TCF4-246ENST00000570287 CCL25O15444 150 aa6.71□□□□□ -1.34
TCF4-246ENST00000570287 XRCC2O43543 280 aa6.71□□□□□ -1.34
TCF4-246ENST00000570287 TSPAN13O95857 204 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms