RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 SOX15O60248 233 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 TMEM127O75204 238 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 PRH1P02810 166 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 RLN1P04808 185 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 IGF1P05019 195 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 SAA1P0DJI8 122 aaPredicted RBP7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 HOXD3P31249 432 aaPredicted RBP7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 RAB9AP51151 201 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 TPPP2P59282 170 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 DGCR2P98153 550 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 CFHR3Q02985 330 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 FOXE3Q13461 319 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 IL18Q14116 193 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 VMA21Q3ZAQ7 101 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 TMEM177Q53S58 311 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 ZNF660Q6AZW8 331 aaPredicted RBP7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 ETV3LQ6ZN32 361 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 MRPL41Q8IXM3 137 aaKnown RBP7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 SPAG16Q8N0X2 631 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 COMMD1Q8N668 190 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 OR6F1Q8NGZ6 308 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 RAB2BQ8WUD1 216 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 ISOC1Q96CN7 298 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 DIRAS2Q96HU8 199 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 RAX2Q96IS3 184 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 ADTRPQ96IZ2 230 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 FYTTD1Q96QD9 318 aaKnown RBP7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 ABHD1Q96SE0 405 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 RNF5Q99942 180 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 FXYD6Q9H0Q3 95 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 ZFP57Q9NU63 452 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 COA4Q9NYJ1 87 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 CEPT1Q9Y6K0 416 aa7.04□□□□□ -1.28
GTF3C1-210ENST00000569394 PKD1L1Q8TDX9 2849 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 ANKRD34BA5PLL1 514 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 HMX3A6NHT5 357 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 MSGN1A6NI15 193 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 CCL24O00175 119 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 ACTL6BO94805 426 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 IGHG4P01861 327 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 TRGV3P03979 118 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 CRYGBP07316 175 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 ELANEP08246 267 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 RRASP10301 218 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 PI3P19957 117 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 PSMB8P28062 276 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 PPIFP30405 207 aaKnown RBP7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 LGALS7P47929 136 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 TMBIM6P55061 237 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 BRWD1-AS2P59051 145 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 TAS2R46P59540 309 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 SSBP2P81877 361 aaPredicted RBP7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 TMEM267Q0VDI3 215 aaPredicted RBP7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 DYRK1AQ13627 763 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 FAAP20Q6NZ36 180 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 C19orf35Q6ZS72 473 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 OVCH2Q7RTZ1 564 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 OR11H1Q8NG94 326 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 DYNC2LI1Q8TCX1 351 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 GIMAP1Q8WWP7 306 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 HSD17B10Q99714 261 aaKnown RBP7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 ZNF430Q9H8G1 570 aaPredicted RBP7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 HRASLSQ9HDD0 168 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 FOXA2Q9Y261 457 aaPredicted RBP7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 NUBP2Q9Y5Y2 271 aa7.03□□□□□ -1.28
GTF3C1-210ENST00000569394 TRAV3A0A0B4J244 114 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 SLC22A5O76082 557 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 SPDEFO95238 335 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 CD3DP04234 171 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 IFNA6P05013 189 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 PGAM2P15259 253 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 GNRHRP30968 328 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 RCVRNP35243 200 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 PPP5CP53041 499 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 UBE2KP61086 200 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 CATR1Q13166 79 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 PRSS8Q16651 343 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 MRGPRG-AS1Q2M3A8 158 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 SCGB2B2Q4G0G5 96 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 FOXB2Q5VYV0 432 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 ZNF562Q6V9R5 426 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 LILRB2Q8N423 598 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 LINC00482Q8N8I6 264 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 ZNF491Q8N8L2 437 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 DMBX1Q8NFW5 382 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 OR4D10Q8NGI6 311 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 OR4S2Q8NH73 311 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 MCFD2Q8NI22 146 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 OSR1Q8TAX0 266 aaPredicted RBP7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 FCAMRQ8WWV6 532 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 DPF1Q92782 380 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 MOB3AQ96BX8 217 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 CMTM3Q96MX0 182 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 ADAM30Q9UKF2 790 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 S4R3C0 116 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 MGAM2Q2M2H8 2515 aa7.02□□□□□ -1.29
GTF3C1-210ENST00000569394 IGHV4OR15-8A0A075B7B6 117 aa7.01□□□□□ -1.29
GTF3C1-210ENST00000569394 A0A087WW49 117 aa7.01□□□□□ -1.29
GTF3C1-210ENST00000569394 PGLYRP1O75594 196 aaPredicted RBP7.01□□□□□ -1.29
GTF3C1-210ENST00000569394 S1PR2O95136 353 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms