RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 DUTP33316 252 aaKnown RBP7.2□□□□□ -1.26
CAPN3-219ENST00000569136 MYCNOSP40205 109 aa7.2□□□□□ -1.26
CAPN3-219ENST00000569136 CDX1P47902 265 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-219ENST00000569136 TAS2R20P59543 309 aa7.2□□□□□ -1.26
CAPN3-219ENST00000569136 RPL23AP62750 156 aaKnown RBP7.2□□□□□ -1.26
CAPN3-219ENST00000569136 CDK10Q15131 360 aa7.2□□□□□ -1.26
CAPN3-219ENST00000569136 AKIRIN2Q53H80 203 aa7.2□□□□□ -1.26
CAPN3-219ENST00000569136 ZNF66Q6ZN08 573 aa7.2□□□□□ -1.26
CAPN3-219ENST00000569136 ZNF695Q8IW36 515 aa7.2□□□□□ -1.26
CAPN3-219ENST00000569136 GVQW1Q8N7I0 195 aa7.2□□□□□ -1.26
CAPN3-219ENST00000569136 TEX45Q8NA69 505 aa7.2□□□□□ -1.26
CAPN3-219ENST00000569136 MINDY2Q8NBR6 621 aa7.2□□□□□ -1.26
CAPN3-219ENST00000569136 OSR1Q8TAX0 266 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-219ENST00000569136 HSPB9Q9BQS6 159 aa7.2□□□□□ -1.26
CAPN3-219ENST00000569136 FBXL15Q9H469 300 aa7.2□□□□□ -1.26
CAPN3-219ENST00000569136 RABL2AQ9UBK7 228 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-219ENST00000569136 METTL1Q9UBP6 276 aaKnown RBP7.2□□□□□ -1.26
CAPN3-219ENST00000569136 LINC00527Q9UJ94 153 aa7.2□□□□□ -1.26
CAPN3-219ENST00000569136 RABL2BQ9UNT1 228 aa7.2□□□□□ -1.26
CAPN3-219ENST00000569136 MRPS7Q9Y2R9 242 aaKnown RBP7.2□□□□□ -1.26
CAPN3-219ENST00000569136 RBMX2Q9Y388 322 aaKnown RBP7.2□□□□□ -1.26
CAPN3-219ENST00000569136 NUBP2Q9Y5Y2 271 aa7.2□□□□□ -1.26
CAPN3-219ENST00000569136 TRAV41A0A0B4J266 112 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 FAM25AB3EWG3 89 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 FAM25CB3EWG5 89 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 FAM25GB3EWG6 89 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 FCN1O00602 326 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 CREBL2O60519 120 aaPredicted RBP7.19□□□□□ -1.26
CAPN3-219ENST00000569136 NOL3O60936 208 aaKnown RBP7.19□□□□□ -1.26
CAPN3-219ENST00000569136 CNIH1O95406 144 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 DUS4LO95620 317 aaKnown RBP7.19□□□□□ -1.26
CAPN3-219ENST00000569136 ELK1P19419 428 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 PPIFP30405 207 aaKnown RBP7.19□□□□□ -1.26
CAPN3-219ENST00000569136 KIR2DS2P43631 304 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 CRIP2P52943 208 aaPredicted RBP7.19□□□□□ -1.26
CAPN3-219ENST00000569136 LINC00205P59089 165 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 UBE2KP61086 200 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 CFHR3Q02985 330 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 ODF1Q14990 250 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 VMA21Q3ZAQ7 101 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 KHDC1LQ5JSQ8 128 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 PYHIN1Q6K0P9 492 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 C10orf99Q6UWK7 81 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 Q6ZSN1 163 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 OVCH2Q7RTZ1 564 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 PPP1R27Q86WC6 154 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 CD300LFQ8TDQ1 290 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 GPX8Q8TED1 209 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 DDB2Q92466 427 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 NAA50Q9GZZ1 169 aaKnown RBP7.19□□□□□ -1.26
CAPN3-219ENST00000569136 SCOCQ9UIL1 159 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 ANAPC10Q9UM13 185 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 WSB1Q9Y6I7 421 aa7.19□□□□□ -1.26
CAPN3-219ENST00000569136 J3QRK9 145 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 HPGDSO60760 199 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 HRASP01112 189 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 PPYP01298 95 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 IGLV2-23P01705 113 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 EIF4EP06730 217 aaKnown RBP7.18□□□□□ -1.26
CAPN3-219ENST00000569136 CRYGBP07316 175 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 AADACP22760 399 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 PSMB8P28062 276 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 RAB9AP51151 201 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 DYRK1AQ13627 763 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 FXYD3Q14802 87 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 LPCAT3Q6P1A2 487 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 CLVS1Q8IUQ0 354 aaPredicted RBP7.18□□□□□ -1.26
CAPN3-219ENST00000569136 CMTM1Q8IZ96 169 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 OR5M8Q8NGP6 311 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 OR5H2Q8NGV7 314 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 OR6F1Q8NGZ6 308 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 ST8SIA2Q92186 375 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 UBE2E2Q96LR5 201 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 HARBI1Q96MB7 349 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 DCUN1D5Q9BTE7 237 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 MCRIP2Q9BUT9 160 aaKnown RBP7.18□□□□□ -1.26
CAPN3-219ENST00000569136 GPR61Q9BZJ8 451 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 SLC5A7Q9GZV3 580 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 PARP11Q9NR21 331 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 ZMAT5Q9UDW3 170 aaKnown RBP7.18□□□□□ -1.26
CAPN3-219ENST00000569136 FOXA2Q9Y261 457 aaPredicted RBP7.18□□□□□ -1.26
CAPN3-219ENST00000569136 VSIG4Q9Y279 399 aa7.18□□□□□ -1.26
CAPN3-219ENST00000569136 IGKV1D-13A0A0B4J2D9 117 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 SRRM4A7MD48 611 aaKnown RBP7.17□□□□□ -1.26
CAPN3-219ENST00000569136 LINC00473A8K010 186 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 KRTAP9-7A8MTY7 169 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 G3V318 75 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 CCL24O00175 119 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 ARPC1BO15143 372 aaKnown RBP7.17□□□□□ -1.26
CAPN3-219ENST00000569136 ATP6V0E1O15342 81 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 RBFOX2O43251 390 aaKnown RBP eCLIP7.17□□□□□ -1.261e-6■■■■■ 32.4
CAPN3-219ENST00000569136 SLC25A17O43808 307 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 FCGR3BO75015 233 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 ACTL6BO94805 426 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 CRYZL1O95825 349 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 IGLV2-14P01704 120 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 IGKV1-13P0DP09 117 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 EGR2P11161 476 aaPredicted RBP7.17□□□□□ -1.26
CAPN3-219ENST00000569136 PTHLHP12272 177 aa7.17□□□□□ -1.26
CAPN3-219ENST00000569136 S100GP29377 79 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms