RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 RFX4Q33E94 735 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 SPIN4Q56A73 249 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 TMEM255AQ5JRV8 349 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 ZNF678Q5SXM1 525 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 CLVS2Q5SYC1 327 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 LCE3AQ5TA76 89 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 ZCCHC23Q6ZST2 131 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 MTERF4Q7Z6M4 381 aaKnown RBP2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 C10orf107Q8IVU9 208 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 ENTHD1Q8IYW4 607 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 CLECL1Q8IZS7 167 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 CCNYL1Q8N7R7 359 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 C19orf18Q8NEA5 215 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 CCDC54Q8NEL0 328 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 OR5T1Q8NG75 326 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 LINC01006Q8NI28 216 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 DYNC2LI1Q8TCX1 351 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 ACTRT1Q8TDG2 376 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 RORBQ92753 470 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 MARC2Q969Z3 335 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 PPCDCQ96CD2 204 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 CMTM5Q96DZ9 223 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 Q96MT0 163 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 TMEM56Q96MV1 263 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 RASL11BQ9BPW5 248 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 PDCD1LG2Q9BQ51 273 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 SLC19A3Q9BZV2 496 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 PLGRKTQ9HBL7 147 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 ACER3Q9NUN7 267 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 PRELID1Q9Y255 219 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 SIGLEC9Q9Y336 463 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 NOTCH1P46531 2555 aa2.31□□□□□ -2.04
HMGB1P6-201ENST00000569046 SMIM26A0A096LP01 95 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 A0A0J9YXY3 114 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 A0A1B0GX12 115 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 SMIM23A6NLE4 172 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 CLDN25C9JDP6 229 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 CDIPTO14735 213 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 SULT1B1O43704 296 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 GATCO43716 136 aaKnown RBP2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 RBBP9O75884 186 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 VAMP5O95183 116 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 CPSF4O95639 269 aaKnown RBP2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 ORM1P02763 201 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 RBP1P09455 135 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 CHTF8P0CG12 524 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 ZNF35P13682 527 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 ZNF14P17017 642 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 FUT3P21217 361 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 MYL9P24844 172 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 CXCR1P25024 350 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 PAX6P26367 422 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 PFN2P35080 140 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 GLRXP35754 106 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 MPV17P39210 176 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 MYCNOSP40205 109 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 OR12D2P58182 307 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 PPP1CBP62140 327 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 GNB2P62879 340 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 RPL38P63173 70 aaKnown RBP2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 PRR3P79522 188 aaKnown RBP2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 HOXC5Q00444 222 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 ZNF45Q02386 682 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 KIAA0040Q15053 153 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 ZNF79Q15937 498 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 GSG1Q2KHT4 349 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 KRTAP13-3Q3SY46 172 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 COX19Q49B96 90 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 FAM201AQ5SY85 155 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 TNFAIP8L2Q6P589 184 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 PLET1Q6UQ28 207 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 SSX8Q7RTT4 187 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 GRINAQ7Z429 371 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 C6orf120Q7Z4R8 191 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 MRPL52Q86TS9 123 aaKnown RBP2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 C1orf174Q8IYL3 243 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 KRTCAP2Q8N6L1 136 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 OR1N2Q8NGR9 330 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 OR13G1Q8NGZ3 307 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 OR2G3Q8NGZ4 309 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 ZNF420Q8TAQ5 688 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 SYNPRQ8TBG9 265 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 C7orf33Q8WU49 177 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 POP5Q969H6 163 aaKnown RBP2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 DDIT4LQ96D03 193 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 NEURL3Q96EH8 262 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 RNF185Q96GF1 192 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 C1orf50Q9BV19 199 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 OR51I1Q9H343 314 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 SLC25A22Q9H936 323 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 ZNF702PQ9H963 129 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 FGFR1OP2Q9NVK5 253 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 ANAPC11Q9NYG5 84 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 TAS2R7Q9NYW3 318 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 SNX12Q9UMY4 172 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 TRAPPC4Q9Y296 219 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 ZNF257Q9Y2Q1 563 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 AP3M1Q9Y2T2 418 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 HDGFL3Q9Y3E1 203 aa2.3□□□□□ -2.04
HMGB1P6-201ENST00000569046 INSIG2Q9Y5U4 225 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms