RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 TMEM30CPA0ZSE6 113 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 NKX6-3A6NJ46 265 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 PSPNO60542 156 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 TUSC2O75896 110 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 FSTL3O95633 263 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 RD3LP0DJH9 198 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 BCL2P10415 239 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 SLC25A6P12236 298 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 HIST1H1BP16401 226 aaKnown RBP7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 EPHA1P21709 976 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 OR3A1P47881 315 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 SLC25A24Q6NUK1 477 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 ZNF880Q6PDB4 577 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 ZNF818PQ6ZRF7 136 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 ODF3L1Q8IXM7 274 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 PLPPR1Q8TBJ4 325 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 MRPL30Q8TCC3 161 aaKnown RBP7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 SDSLQ96GA7 329 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 FAM210BQ96KR6 192 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 RAB40CQ96S21 281 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 FAM234AQ9H0X4 552 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 ZNF665Q9H7R5 613 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 RALYQ9UKM9 306 aaKnown RBP7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 RNF150Q9ULK6 438 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 LAMP3Q9UQV4 416 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 CHD6Q8TD26 2715 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 USP9XQ93008 2570 aaPredicted RBP7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 SMG1Q96Q15 3661 aaKnown RBP7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 A0A1B0GU03 582 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 CLDN34H7C241 214 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 MGST3O14880 152 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 ZNF737O75373 536 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 TMEM50AO95807 157 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 IFNA1P01562 189 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 IFNA10P01566 189 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 TRGC2P03986 189 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 SSTP61278 116 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 HOXA4Q00056 320 aaPredicted RBP7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 FAM201AQ5SY85 155 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 TGIF2LYQ8IUE0 185 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 DEFB108BQ8NET1 73 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 NCOR1P1Q9H4R4 102 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 GNG13Q9P2W3 67 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 TRAPPC2LQ9UL33 140 aa7.81□□□□□ -1.16
CNEP1R1-206ENST00000565556 DSCAMO60469 2012 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 TSTD3H0UI37 97 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 CHST1O43916 411 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 CLDN1O95832 211 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 GYPAP02724 150 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 OPN1MWP04001 364 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 OPN1MW2P0DN77 364 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 OPN1MW3P0DN78 364 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 PKIAP61925 76 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 RAB11AP62491 216 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 FAM90A2PQ658T7 463 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 ZNF787Q6DD87 383 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 TRAT1Q6PIZ9 186 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 ZNF788Q6ZQV5 615 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 THNSL2Q86YJ6 484 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 SCGB1C1Q8TD33 95 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 RCC1LQ96I51 464 aaKnown RBP7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 P2RX4Q99571 388 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 PSMG3Q9BT73 122 aaPredicted RBP7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 CTDSP1Q9GZU7 261 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 PRDM13Q9H4Q3 707 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 MBNL3Q9NUK0 354 aaKnown RBP7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 DCAF16Q9NXF7 216 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 KCNIP1Q9NZI2 227 aa7.8□□□□□ -1.16
CNEP1R1-206ENST00000565556 TRBV24-1A0A075B6N3 115 aa7.79□□□□□ -1.16
CNEP1R1-206ENST00000565556 IGKV1D-13A0A0B4J2D9 117 aa7.79□□□□□ -1.16
CNEP1R1-206ENST00000565556 NDUFS6O75380 124 aaKnown RBP7.79□□□□□ -1.16
CNEP1R1-206ENST00000565556 TRGC1P0CF51 173 aa7.79□□□□□ -1.16
CNEP1R1-206ENST00000565556 IGKV1-13P0DP09 117 aa7.79□□□□□ -1.16
CNEP1R1-206ENST00000565556 COL8A2P25067 703 aa7.79□□□□□ -1.16
CNEP1R1-206ENST00000565556 GPX4P36969 197 aaPredicted RBP7.79□□□□□ -1.16
CNEP1R1-206ENST00000565556 PAX9P55771 341 aa7.79□□□□□ -1.16
CNEP1R1-206ENST00000565556 AESQ08117 197 aa7.79□□□□□ -1.16
CNEP1R1-206ENST00000565556 OR5R1Q8NH85 324 aa7.79□□□□□ -1.16
CNEP1R1-206ENST00000565556 MBD3L1Q8WWY6 194 aa7.79□□□□□ -1.16
CNEP1R1-206ENST00000565556 TIMD4Q96H15 378 aa7.79□□□□□ -1.16
CNEP1R1-206ENST00000565556 GAFA1Q96PS6 74 aa7.79□□□□□ -1.16
CNEP1R1-206ENST00000565556 CCL13Q99616 98 aa7.79□□□□□ -1.16
CNEP1R1-206ENST00000565556 GPR61Q9BZJ8 451 aa7.79□□□□□ -1.16
CNEP1R1-206ENST00000565556 CCL28Q9NRJ3 127 aa7.79□□□□□ -1.16
CNEP1R1-206ENST00000565556 PITPNC1Q9UKF7 332 aa7.79□□□□□ -1.16
CNEP1R1-206ENST00000565556 SMCO3A2RU48 225 aa7.78□□□□□ -1.16
CNEP1R1-206ENST00000565556 ZFP92A6NM28 416 aa7.78□□□□□ -1.16
CNEP1R1-206ENST00000565556 OVOL3O00110 214 aa7.78□□□□□ -1.16
CNEP1R1-206ENST00000565556 TNFRSF13BO14836 293 aaPredicted RBP7.78□□□□□ -1.16
CNEP1R1-206ENST00000565556 PGLYRP1O75594 196 aaPredicted RBP7.78□□□□□ -1.16
CNEP1R1-206ENST00000565556 NXPH3O95157 252 aa7.78□□□□□ -1.16
CNEP1R1-206ENST00000565556 TFF1P04155 84 aa7.78□□□□□ -1.16
CNEP1R1-206ENST00000565556 SERPINE2P07093 398 aa7.78□□□□□ -1.16
CNEP1R1-206ENST00000565556 WNT2P09544 360 aa7.78□□□□□ -1.16
CNEP1R1-206ENST00000565556 SCTP09683 121 aa7.78□□□□□ -1.16
CNEP1R1-206ENST00000565556 GZMHP20718 246 aa7.78□□□□□ -1.16
CNEP1R1-206ENST00000565556 F2RP25116 425 aa7.78□□□□□ -1.16
CNEP1R1-206ENST00000565556 EFNA4P52798 201 aa7.78□□□□□ -1.16
CNEP1R1-206ENST00000565556 TMEM267Q0VDI3 215 aaPredicted RBP7.78□□□□□ -1.16
CNEP1R1-206ENST00000565556 HERPUD1Q15011 391 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms