RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 ELOVL1Q9BW60 279 aa11.98□□□□□ -0.49
CDH3-204ENST00000565453 ZNF430Q9H8G1 570 aaPredicted RBP11.98□□□□□ -0.49
CDH3-204ENST00000565453 COA4Q9NYJ1 87 aa11.98□□□□□ -0.49
CDH3-204ENST00000565453 ETV7Q9Y603 341 aa11.98□□□□□ -0.49
CDH3-204ENST00000565453 FCGR3BO75015 233 aa11.97□□□□□ -0.49
CDH3-204ENST00000565453 OR9G9P0C7N8 305 aa11.97□□□□□ -0.49
CDH3-204ENST00000565453 CD36P16671 472 aa11.97□□□□□ -0.49
CDH3-204ENST00000565453 BRWD1-AS2P59051 145 aa11.97□□□□□ -0.49
CDH3-204ENST00000565453 ZNF45Q02386 682 aa11.97□□□□□ -0.49
CDH3-204ENST00000565453 USMG5Q96IX5 58 aa11.97□□□□□ -0.49
CDH3-204ENST00000565453 PHB2Q99623 299 aa11.97□□□□□ -0.49
CDH3-204ENST00000565453 PEF1Q9UBV8 284 aaKnown RBP11.97□□□□□ -0.49
CDH3-204ENST00000565453 ADAM30Q9UKF2 790 aa11.97□□□□□ -0.49
CDH3-204ENST00000565453 PRELID3BQ9Y3B1 194 aa11.97□□□□□ -0.49
CDH3-204ENST00000565453 TNCP24821 2201 aa11.96□□□□□ -0.49
CDH3-204ENST00000565453 TRBV9A0A0B4J1U6 114 aa11.96□□□□□ -0.49
CDH3-204ENST00000565453 LOC100506127A0A0U1RQW1 187 aa11.96□□□□□ -0.49
CDH3-204ENST00000565453 FRMD6-AS1P0C7T7 363 aa11.96□□□□□ -0.49
CDH3-204ENST00000565453 KCTD21Q4G0X4 260 aa11.96□□□□□ -0.49
CDH3-204ENST00000565453 OR2B11Q5JQS5 317 aa11.96□□□□□ -0.49
CDH3-204ENST00000565453 C10orf55Q5SWW7 151 aa11.96□□□□□ -0.49
CDH3-204ENST00000565453 MMD2Q8IY49 270 aa11.96□□□□□ -0.49
CDH3-204ENST00000565453 Q8N1Y9 231 aa11.96□□□□□ -0.49
CDH3-204ENST00000565453 OR9G4Q8NGQ1 327 aa11.96□□□□□ -0.49
CDH3-204ENST00000565453 ACOT12Q8WYK0 555 aa11.96□□□□□ -0.49
CDH3-204ENST00000565453 HSD17B10Q99714 261 aaKnown RBP11.96□□□□□ -0.49
CDH3-204ENST00000565453 TENM3Q9P273 2699 aa11.96□□□□□ -0.5
CDH3-204ENST00000565453 HUWE1Q7Z6Z7 4374 aaKnown RBP11.96□□□□□ -0.5
CDH3-204ENST00000565453 TRAV18A0A075B6X5 111 aa11.95□□□□□ -0.5
CDH3-204ENST00000565453 A0A0A6YYH2 397 aa11.95□□□□□ -0.5
CDH3-204ENST00000565453 A6NJ64 397 aa11.95□□□□□ -0.5
CDH3-204ENST00000565453 CREBL2O60519 120 aaPredicted RBP11.95□□□□□ -0.5
CDH3-204ENST00000565453 NEDD8Q15843 81 aa11.95□□□□□ -0.5
CDH3-204ENST00000565453 IDNKQ5T6J7 187 aa11.95□□□□□ -0.5
CDH3-204ENST00000565453 HOGA1Q86XE5 327 aa11.95□□□□□ -0.5
CDH3-204ENST00000565453 PUSL1Q8N0Z8 303 aaKnown RBP11.95□□□□□ -0.5
CDH3-204ENST00000565453 MFSD4AQ8N468 514 aa11.95□□□□□ -0.5
CDH3-204ENST00000565453 TTC9CQ8N5M4 171 aa11.95□□□□□ -0.5
CDH3-204ENST00000565453 GVQW1Q8N7I0 195 aa11.95□□□□□ -0.5
CDH3-204ENST00000565453 BEST4Q8NFU0 473 aa11.95□□□□□ -0.5
CDH3-204ENST00000565453 DCUN1D5Q9BTE7 237 aa11.95□□□□□ -0.5
CDH3-204ENST00000565453 RSRP1Q9BUV0 290 aa11.95□□□□□ -0.5
CDH3-204ENST00000565453 AKIP1Q9NQ31 210 aa11.95□□□□□ -0.5
CDH3-204ENST00000565453 MRPS7Q9Y2R9 242 aaKnown RBP11.95□□□□□ -0.5
CDH3-204ENST00000565453 FAM223BA6NKX1 122 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 TEX22C9J3V5 150 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 MPPED1O15442 326 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 PRH1P02810 166 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 PTHLHP12272 177 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 SYNJ2BPP57105 145 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 RHOGP84095 191 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 MSMO1Q15800 293 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 ZNF66Q6ZN08 573 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 ANKRD13BQ86YJ7 626 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 FAM223AQ8IWN6 122 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 VKORC1L1Q8N0U8 176 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 OR4S2Q8NH73 311 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 TMEM167AQ8TBQ9 72 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 TCTEX1D2Q8WW35 142 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 GPHA2Q96T91 129 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 SPIN2AQ99865 258 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 SPIN2BQ9BPZ2 258 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 AUNIPQ9H7T9 357 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 SPATA2Q9UM82 520 aa11.94□□□□□ -0.5
CDH3-204ENST00000565453 A0A1B0GW64 132 aa11.93□□□□□ -0.5
CDH3-204ENST00000565453 E7EUB6 86 aa11.93□□□□□ -0.5
CDH3-204ENST00000565453 KBTBD11O94819 623 aa11.93□□□□□ -0.5
CDH3-204ENST00000565453 OR2A4O95047 310 aa11.93□□□□□ -0.5
CDH3-204ENST00000565453 CSN3P07498 182 aa11.93□□□□□ -0.5
CDH3-204ENST00000565453 SNAPC3Q92966 411 aa11.93□□□□□ -0.5
CDH3-204ENST00000565453 OR2A7Q96R45 310 aa11.93□□□□□ -0.5
CDH3-204ENST00000565453 CCL28Q9NRJ3 127 aa11.93□□□□□ -0.5
CDH3-204ENST00000565453 TAS2R8Q9NYW2 309 aa11.93□□□□□ -0.5
CDH3-204ENST00000565453 SIGLEC8Q9NYZ4 499 aa11.93□□□□□ -0.5
CDH3-204ENST00000565453 HMX3A6NHT5 357 aa11.92□□□□□ -0.5
CDH3-204ENST00000565453 A8MZ25 164 aa11.92□□□□□ -0.5
CDH3-204ENST00000565453 BMPR1BO00238 502 aa11.92□□□□□ -0.5
CDH3-204ENST00000565453 TMEM127O75204 238 aa11.92□□□□□ -0.5
CDH3-204ENST00000565453 ACTL6BO94805 426 aa11.92□□□□□ -0.5
CDH3-204ENST00000565453 IL6RP08887 468 aaPredicted RBP11.92□□□□□ -0.5
CDH3-204ENST00000565453 FCGR2CP31995 323 aa11.92□□□□□ -0.5
CDH3-204ENST00000565453 TGFBR1P36897 503 aa11.92□□□□□ -0.5
CDH3-204ENST00000565453 MECP2P51608 486 aaKnown RBP11.92□□□□□ -0.5
CDH3-204ENST00000565453 ARPC4P59998 168 aa11.92□□□□□ -0.5
CDH3-204ENST00000565453 EXOSC2Q13868 293 aaKnown RBP11.92□□□□□ -0.5
CDH3-204ENST00000565453 RPEL1Q2QD12 228 aa11.92□□□□□ -0.5
CDH3-204ENST00000565453 VSTM2AQ8TAG5 236 aa11.92□□□□□ -0.5
CDH3-204ENST00000565453 RCHY1Q96PM5 261 aa11.92□□□□□ -0.5
CDH3-204ENST00000565453 THAP7Q9BT49 309 aaPredicted RBP11.92□□□□□ -0.5
CDH3-204ENST00000565453 C19orf73Q9NVV2 129 aa11.92□□□□□ -0.5
CDH3-204ENST00000565453 DMRT1Q9Y5R6 373 aa11.92□□□□□ -0.5
CDH3-204ENST00000565453 STAB2Q8WWQ8 2551 aa11.91□□□□□ -0.5
CDH3-204ENST00000565453 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.91□□□□□ -0.5
CDH3-204ENST00000565453 PPYP01298 95 aa11.91□□□□□ -0.5
CDH3-204ENST00000565453 ZNF735P0CB33 412 aa11.91□□□□□ -0.5
CDH3-204ENST00000565453 IGHV4-30-4P0DP06 118 aa11.91□□□□□ -0.5
CDH3-204ENST00000565453 RPL27AP46776 148 aaKnown RBP11.91□□□□□ -0.5
CDH3-204ENST00000565453 ATP5G2Q06055 141 aa11.91□□□□□ -0.5
CDH3-204ENST00000565453 C19orf35Q6ZS72 473 aa11.91□□□□□ -0.5
CDH3-204ENST00000565453 SLC25A42Q86VD7 318 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms