RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 ARID1AO14497 2285 aa2.42□□□□□ -2.02
HERC1-215ENST00000561436 KIAA1549Q9HCM3 1950 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 IGLV4-69A0A075B6H9 119 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 IGKV1D-43A0A0B4J1Z2 117 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 TCRBV4S1A1TA0A5B7 111 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 GGT3PA6NGU5 568 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 CPSF4LA6NMK7 179 aaKnown RBP2.41□□□□□ -2.02
HERC1-215ENST00000561436 OOSP1A8MZH6 123 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 LRRN3E7EW58 273 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 BHLHE40O14503 412 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 MAGEB4O15481 346 aaPredicted RBP2.41□□□□□ -2.02
HERC1-215ENST00000561436 SLC16A7O60669 478 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 OPN1SWP03999 348 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 ACSM4P0C7M7 580 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 PGA5P0DJD9 388 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 CD28P10747 220 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 RAB3BP20337 219 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 GGT2P36268 569 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 CCR6P51684 374 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 TAS2R41P59536 307 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 PRKCDQ05655 676 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 ERCC8Q13216 396 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 TRAM2Q15035 370 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 TNFAIP8L3Q5GJ75 292 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 COQ5Q5HYK3 327 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 HES5Q5TA89 166 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 METTL21CQ5VZV1 264 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 STUMQ69YW2 141 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 TEX43Q6ZNM6 134 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 LINC00173Q6ZV60 143 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 MBOAT2Q6ZWT7 520 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 FAM122BQ7Z309 247 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 COMTD1Q86VU5 262 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 GPR32P1Q8NGA4 272 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 OR11H6Q8NGC7 330 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 OR10AD1Q8NGE0 317 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 OR8J3Q8NGG0 315 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 OR13D1Q8NGV5 346 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 OR5B3Q8NH48 314 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 PIFOQ8TCI5 191 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 MARCH1Q8TCQ1 289 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 CAPSLQ8WWF8 208 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 PRRC1Q96M27 445 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 MICU1Q9BPX6 476 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 C20orf27Q9GZN8 174 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 NSRP1Q9H0G5 558 aaKnown RBP2.41□□□□□ -2.02
HERC1-215ENST00000561436 ISYNA1Q9NPH2 558 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 USE1Q9NZ43 259 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 CCDC59Q9P031 241 aaKnown RBP2.41□□□□□ -2.02
HERC1-215ENST00000561436 VAPAQ9P0L0 249 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 CYB5R1Q9UHQ9 305 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 PYCARDQ9ULZ3 195 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 NDUFAF1Q9Y375 327 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 TRRAPQ9Y4A5 3859 aa2.41□□□□□ -2.02
HERC1-215ENST00000561436 ZANQ9Y493 2812 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.4□□□□□ -2.03
HERC1-215ENST00000561436 IGHV3-66A0A0C4DH42 116 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 EFCAB9A8MZ26 197 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 INS-IGF2F8WCM5 200 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 H0YHG0 523 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 M0R135 149 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 RER1O15258 196 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 SYNGR1O43759 233 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 NOS1APO75052 506 aaPredicted RBP2.4□□□□□ -2.03
HERC1-215ENST00000561436 FKBP6O75344 327 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 E2F6O75461 281 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 NDUFB2O95178 105 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 CST4P01036 141 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 GYPAP02724 150 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 C1QCP02747 245 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 PRB2P02812 416 aaPredicted RBP2.4□□□□□ -2.03
HERC1-215ENST00000561436 HLA-DPB1P04440 258 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 IFI30P13284 250 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 DCKP27707 260 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 BRS3P32247 399 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 IFNGR2P38484 337 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 KIR3DL2P43630 455 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 OR12D2P58182 307 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 SMIM11AP58511 58 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 GRB2P62993 217 aaKnown RBP2.4□□□□□ -2.03
HERC1-215ENST00000561436 SELENOWP63302 87 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 MEF2CQ06413 473 aaPredicted RBP2.4□□□□□ -2.03
HERC1-215ENST00000561436 FMODQ06828 376 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 DGCR6Q14129 220 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 ZSCAN26Q16670 478 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 RSPO1Q2MKA7 263 aaPredicted RBP2.4□□□□□ -2.03
HERC1-215ENST00000561436 TEX30Q5JUR7 227 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 OR52W1Q6IF63 320 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 LCN8Q6JVE9 175 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 HCP5Q6MZN7 132 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 RPL13AP3Q6NVV1 102 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 EPGNQ6UW88 154 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 CYP4Z1Q86W10 505 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 MSRB3Q8IXL7 192 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 OFCC1Q8IZS5 231 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 OR5AS1Q8N127 324 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 OSR2Q8N2R0 312 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 ZNF561Q8N587 486 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 HSD17B11Q8NBQ5 300 aa2.4□□□□□ -2.03
HERC1-215ENST00000561436 OR1M1Q8NGA1 313 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms