RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 NDUFS7O75251 213 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 FBXO24O75426 580 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 RBMXL2O75526 392 aaKnown RBP10.51□□□□□ -0.73
SNX1-211ENST00000560829 APOA2P02652 100 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 FGF2P09038 288 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 RNF224P0DH78 156 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 IL3RAP26951 378 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 GNB2P62879 340 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 TMEM267Q0VDI3 215 aaPredicted RBP10.51□□□□□ -0.73
SNX1-211ENST00000560829 OR4A47Q6IF82 309 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 SSX9Q7RTT3 188 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 VKORC1L1Q8N0U8 176 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 TMEM217Q8N7C4 229 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 BEND2Q8NDZ0 799 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 OSR1Q8TAX0 266 aaPredicted RBP10.51□□□□□ -0.73
SNX1-211ENST00000560829 NABP2Q9BQ15 211 aa10.51□□□□□ -0.73
SNX1-211ENST00000560829 C15orf61A6NNL5 157 aa10.5□□□□□ -0.73
SNX1-211ENST00000560829 IGKV1-16P04430 117 aa10.5□□□□□ -0.73
SNX1-211ENST00000560829 METTL15P1P0C7V9 234 aa10.5□□□□□ -0.73
SNX1-211ENST00000560829 OR2B8PP59922 312 aa10.5□□□□□ -0.73
SNX1-211ENST00000560829 HBG1P69891 147 aa10.5□□□□□ -0.73
SNX1-211ENST00000560829 HBG2P69892 147 aa10.5□□□□□ -0.73
SNX1-211ENST00000560829 TMEM177Q53S58 311 aa10.5□□□□□ -0.73
SNX1-211ENST00000560829 SPANXN5Q5MJ07 72 aa10.5□□□□□ -0.73
SNX1-211ENST00000560829 HAPLN4Q86UW8 402 aa10.5□□□□□ -0.73
SNX1-211ENST00000560829 OR13D1Q8NGV5 346 aa10.5□□□□□ -0.73
SNX1-211ENST00000560829 SSBP3Q9BWW4 388 aaPredicted RBP10.5□□□□□ -0.73
SNX1-211ENST00000560829 FOXA2Q9Y261 457 aaPredicted RBP10.5□□□□□ -0.73
SNX1-211ENST00000560829 USF3Q68DE3 2245 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 CEBPZOSA8MTT3 80 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 ZNF705EA8MWA4 302 aaPredicted RBP10.49□□□□□ -0.73
SNX1-211ENST00000560829 SCAF4O95104 1147 aaKnown RBP10.49□□□□□ -0.73
SNX1-211ENST00000560829 RAB5CP51148 216 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 PRRX1P54821 245 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 ARL16Q0P5N6 197 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 HLA-DRB5Q30154 266 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 PDPNQ86YL7 162 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 HSD17B11Q8NBQ5 300 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 ZDHHC16Q969W1 377 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 GNPNAT1Q96EK6 184 aaPredicted RBP10.49□□□□□ -0.73
SNX1-211ENST00000560829 OR4C12Q96R67 309 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 TSNAXQ99598 290 aaKnown RBP10.49□□□□□ -0.73
SNX1-211ENST00000560829 CLEC7AQ9BXN2 247 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 PARD6GQ9BYG4 376 aaPredicted RBP10.49□□□□□ -0.73
SNX1-211ENST00000560829 TMEM14BQ9NUH8 114 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 TRAV3A0A0B4J244 114 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 PMS2P5A8MQ11 134 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 A8MXK9 166 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 NUDT19A8MXV4 375 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 M0R1W7 72 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 IFNA17P01571 189 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 ARG1P05089 322 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 ATP6V0CP27449 155 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 BLOC1S1P78537 153 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 DIAPH2-AS1Q14236 149 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 TGIF2LXQ8IUE1 241 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 ZNF525Q8N782 197 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 SH3BGRL3Q9H299 93 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 PARP11Q9NR21 331 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 BET1LQ9NYM9 111 aa10.49□□□□□ -0.73
SNX1-211ENST00000560829 STRAPQ9Y3F4 350 aaKnown RBP10.49□□□□□ -0.73
SNX1-211ENST00000560829 CACNA1BQ00975 2339 aa10.48□□□□□ -0.73
SNX1-211ENST00000560829 LOC105371242A0A075B767 164 aa10.48□□□□□ -0.73
SNX1-211ENST00000560829 SRRM4A7MD48 611 aaKnown RBP10.48□□□□□ -0.73
SNX1-211ENST00000560829 MC5RP33032 325 aa10.48□□□□□ -0.73
SNX1-211ENST00000560829 VDAC2P45880 294 aaPredicted RBP10.48□□□□□ -0.73
SNX1-211ENST00000560829 TOR2AQ5JU69 321 aa10.48□□□□□ -0.73
SNX1-211ENST00000560829 PUSL1Q8N0Z8 303 aaKnown RBP10.48□□□□□ -0.73
SNX1-211ENST00000560829 Q8N7P7 452 aa10.48□□□□□ -0.73
SNX1-211ENST00000560829 PRNDQ9UKY0 176 aa10.48□□□□□ -0.73
SNX1-211ENST00000560829 ZNF257Q9Y2Q1 563 aa10.48□□□□□ -0.73
SNX1-211ENST00000560829 SPTBN1Q01082 2364 aaKnown RBP10.48□□□□□ -0.73
SNX1-211ENST00000560829 DOPEY1Q5JWR5 2465 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 RAB19A4D1S5 217 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 BUB1B-PAK6H3BSN5 160 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 I3L521 148 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 UPK2O00526 184 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 IFNA5P01569 189 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 OR8U8P0C7N1 319 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 REG1BP48304 166 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 RAB13P51153 203 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 HSPE1P61604 102 aaKnown RBP10.47□□□□□ -0.73
SNX1-211ENST00000560829 ATP6V1FQ16864 119 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 PXDC1Q5TGL8 231 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 C1orf122Q6ZSJ8 110 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 OR4C13Q8NGP0 309 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 LYPD6BQ8NI32 183 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 LHX4Q969G2 390 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 MARC2Q969Z3 335 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 TCF19Q9Y242 345 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 WASHC3Q9Y3C0 194 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 LRBAP50851 2863 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 UMAD1C9J7I0 102 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 TRIM77I1YAP6 450 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 SHOXO15266 292 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 IGHV2-5P01817 119 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 SLC38A11Q08AI6 406 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 BTNL8Q6UX41 500 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 KIR3DL3Q8N743 410 aa10.47□□□□□ -0.73
SNX1-211ENST00000560829 OR4P4Q8NGL7 312 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms