RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 CT45A6P0DMU7 189 aa11.15□□□□□ -0.62
PKNOX1-209ENST00000560448 CT45A5P0DMU8 189 aa11.15□□□□□ -0.62
PKNOX1-209ENST00000560448 CT45A7P0DMV0 189 aa11.15□□□□□ -0.62
PKNOX1-209ENST00000560448 ECI1P42126 302 aa11.15□□□□□ -0.62
PKNOX1-209ENST00000560448 THBS3P49746 956 aa11.15□□□□□ -0.62
PKNOX1-209ENST00000560448 H2BFSP57053 126 aa11.15□□□□□ -0.62
PKNOX1-209ENST00000560448 PROK1P58294 105 aa11.15□□□□□ -0.62
PKNOX1-209ENST00000560448 RAP2BP61225 183 aa11.15□□□□□ -0.62
PKNOX1-209ENST00000560448 SRSF4Q08170 494 aaKnown RBP11.15□□□□□ -0.62
PKNOX1-209ENST00000560448 RPL39P5Q59GN2 51 aa11.15□□□□□ -0.62
PKNOX1-209ENST00000560448 Q5BKY6 102 aa11.15□□□□□ -0.62
PKNOX1-209ENST00000560448 C9orf62Q8N4C0 152 aa11.15□□□□□ -0.62
PKNOX1-209ENST00000560448 C5orf56Q8N8D9 126 aa11.15□□□□□ -0.62
PKNOX1-209ENST00000560448 MITD1Q8WV92 249 aa11.15□□□□□ -0.62
PKNOX1-209ENST00000560448 ZNF702PQ9H963 129 aa11.15□□□□□ -0.62
PKNOX1-209ENST00000560448 SDHAF2Q9NX18 166 aa11.15□□□□□ -0.62
PKNOX1-209ENST00000560448 H0YJW9 148 aa11.14□□□□□ -0.63
PKNOX1-209ENST00000560448 SIX6O95475 246 aa11.14□□□□□ -0.63
PKNOX1-209ENST00000560448 PPYP01298 95 aa11.14□□□□□ -0.63
PKNOX1-209ENST00000560448 HLA-AP01891 365 aaKnown RBP11.14□□□□□ -0.63
PKNOX1-209ENST00000560448 NFYAP23511 347 aaPredicted RBP11.14□□□□□ -0.63
PKNOX1-209ENST00000560448 FCGR2CP31995 323 aa11.14□□□□□ -0.63
PKNOX1-209ENST00000560448 TMEM128Q5BJH2 165 aa11.14□□□□□ -0.63
PKNOX1-209ENST00000560448 ARSJQ5FYB0 599 aaPredicted RBP11.14□□□□□ -0.63
PKNOX1-209ENST00000560448 WFDC12Q8WWY7 111 aa11.14□□□□□ -0.63
PKNOX1-209ENST00000560448 ZNF2Q9BSG1 426 aaPredicted RBP11.14□□□□□ -0.63
PKNOX1-209ENST00000560448 KIAA1456Q9P272 454 aa11.14□□□□□ -0.63
PKNOX1-209ENST00000560448 IGHV3-72A0A0B4J1Y9 119 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 A0A0B4J2A0 478 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 DBX1A6NMT0 343 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 NCBP2LA6PVI3 153 aaKnown RBP11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 M0R1X1 148 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 GOSR2O14653 212 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 KCNAB3O43448 404 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 PROP1O75360 226 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 SPDEFO95238 335 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 SFT2D2O95562 160 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 DUS4LO95620 317 aaKnown RBP11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 CTSDP07339 412 aaPredicted RBP11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 AKR1C4P17516 323 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 SUPT4H1P63272 117 aaKnown RBP11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 MMDQ15546 238 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 RTL8BQ17RB0 113 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 ABCA11PQ4W5N1 156 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 FAM71E2Q8N5Q1 922 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 UXS1Q8NBZ7 420 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 NPBQ8NG41 125 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 OR2T35Q8NGX2 323 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 ASB13Q8WXK3 278 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 HSD17B10Q99714 261 aaKnown RBP11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 RASL11BQ9BPW5 248 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 SHPKQ9UHJ6 478 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 RNF150Q9ULK6 438 aa11.13□□□□□ -0.63
PKNOX1-209ENST00000560448 H7C2Y5 167 aa11.12□□□□□ -0.63
PKNOX1-209ENST00000560448 RGS13O14921 159 aa11.12□□□□□ -0.63
PKNOX1-209ENST00000560448 NBR2O15453 112 aa11.12□□□□□ -0.63
PKNOX1-209ENST00000560448 NDUFA3O95167 84 aa11.12□□□□□ -0.63
PKNOX1-209ENST00000560448 AMY1AP04745 511 aa11.12□□□□□ -0.63
PKNOX1-209ENST00000560448 PI3P19957 117 aa11.12□□□□□ -0.63
PKNOX1-209ENST00000560448 VDAC2P45880 294 aaPredicted RBP11.12□□□□□ -0.63
PKNOX1-209ENST00000560448 LGALS7P47929 136 aa11.12□□□□□ -0.63
PKNOX1-209ENST00000560448 UCP3P55916 312 aa11.12□□□□□ -0.63
PKNOX1-209ENST00000560448 BLCAPP62952 87 aa11.12□□□□□ -0.63
PKNOX1-209ENST00000560448 LPCAT3Q6P1A2 487 aa11.12□□□□□ -0.63
PKNOX1-209ENST00000560448 ZNF66Q6ZN08 573 aa11.12□□□□□ -0.63
PKNOX1-209ENST00000560448 Q8N9W7 124 aa11.12□□□□□ -0.63
PKNOX1-209ENST00000560448 TSNAXQ99598 290 aaKnown RBP11.12□□□□□ -0.63
PKNOX1-209ENST00000560448 GON7Q9BXV9 100 aa11.12□□□□□ -0.63
PKNOX1-209ENST00000560448 FXYD6Q9H0Q3 95 aa11.12□□□□□ -0.63
PKNOX1-209ENST00000560448 SERTAD4Q9NUC0 356 aa11.12□□□□□ -0.63
PKNOX1-209ENST00000560448 ZNF580Q9UK33 172 aa11.12□□□□□ -0.63
PKNOX1-209ENST00000560448 PRELID3BQ9Y3B1 194 aa11.12□□□□□ -0.63
PKNOX1-209ENST00000560448 IGHG2P01859 326 aa11.11□□□□□ -0.63
PKNOX1-209ENST00000560448 DUTP33316 252 aaKnown RBP11.11□□□□□ -0.63
PKNOX1-209ENST00000560448 HERV-K104P61576 105 aa11.11□□□□□ -0.63
PKNOX1-209ENST00000560448 HNF4GQ14541 408 aa11.11□□□□□ -0.63
PKNOX1-209ENST00000560448 FOXRED2Q8IWF2 684 aa11.11□□□□□ -0.63
PKNOX1-209ENST00000560448 ZNF383Q8NA42 475 aa11.11□□□□□ -0.63
PKNOX1-209ENST00000560448 OR5M8Q8NGP6 311 aa11.11□□□□□ -0.63
PKNOX1-209ENST00000560448 MOB3AQ96BX8 217 aa11.11□□□□□ -0.63
PKNOX1-209ENST00000560448 FLYWCH2Q96CP2 140 aaKnown RBP11.11□□□□□ -0.63
PKNOX1-209ENST00000560448 PHB2Q99623 299 aa11.11□□□□□ -0.63
PKNOX1-209ENST00000560448 WNT10AQ9GZT5 417 aa11.11□□□□□ -0.63
PKNOX1-209ENST00000560448 SLC35D1Q9NTN3 355 aa11.11□□□□□ -0.63
PKNOX1-209ENST00000560448 PGAM2P15259 253 aa11.1□□□□□ -0.63
PKNOX1-209ENST00000560448 AADACP22760 399 aa11.1□□□□□ -0.63
PKNOX1-209ENST00000560448 VAMP1P23763 118 aa11.1□□□□□ -0.63
PKNOX1-209ENST00000560448 KIR2DS2P43631 304 aa11.1□□□□□ -0.63
PKNOX1-209ENST00000560448 OSR1Q8TAX0 266 aaPredicted RBP11.1□□□□□ -0.63
PKNOX1-209ENST00000560448 DDB2Q92466 427 aa11.1□□□□□ -0.63
PKNOX1-209ENST00000560448 CITED1Q99966 193 aa11.1□□□□□ -0.63
PKNOX1-209ENST00000560448 C14orf166Q9Y224 244 aaKnown RBP11.1□□□□□ -0.63
PKNOX1-209ENST00000560448 AP4M1O00189 453 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 HLA-DRB1P01911 266 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 S100GP29377 79 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 CATR1Q13166 79 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 C5orf64Q2M2E5 130 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 ANKRD55Q3KP44 614 aa11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 LGALSLQ3ZCW2 172 aaPredicted RBP11.09□□□□□ -0.63
PKNOX1-209ENST00000560448 FBLN7Q53RD9 439 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms