RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 SRRM4A7MD48 611 aaKnown RBP9.64□□□□□ -0.87
SNX1-209ENST00000559961 OR2A4O95047 310 aa9.64□□□□□ -0.87
SNX1-209ENST00000559961 HRASP01112 189 aa9.64□□□□□ -0.87
SNX1-209ENST00000559961 IGHV4-30-4P0DP06 118 aa9.64□□□□□ -0.87
SNX1-209ENST00000559961 NFYAP23511 347 aaPredicted RBP9.64□□□□□ -0.87
SNX1-209ENST00000559961 FGF9P31371 208 aaPredicted RBP9.64□□□□□ -0.87
SNX1-209ENST00000559961 KIR2DS2P43631 304 aa9.64□□□□□ -0.87
SNX1-209ENST00000559961 RHOGP84095 191 aa9.64□□□□□ -0.87
SNX1-209ENST00000559961 UBE2UQ5VVX9 321 aa9.64□□□□□ -0.87
SNX1-209ENST00000559961 IDO2Q6ZQW0 420 aa9.64□□□□□ -0.87
SNX1-209ENST00000559961 OR51E2Q9H255 320 aa9.64□□□□□ -0.87
SNX1-209ENST00000559961 DIABLOQ9NR28 239 aa9.64□□□□□ -0.87
SNX1-209ENST00000559961 TXNL4BQ9NX01 149 aaKnown RBP9.64□□□□□ -0.87
SNX1-209ENST00000559961 SMIM30A4D0T7 59 aa9.63□□□□□ -0.87
SNX1-209ENST00000559961 HLA-DQB1P01920 261 aa9.63□□□□□ -0.87
SNX1-209ENST00000559961 MAS1LP35410 378 aa9.63□□□□□ -0.87
SNX1-209ENST00000559961 EXOSC2Q13868 293 aaKnown RBP9.63□□□□□ -0.87
SNX1-209ENST00000559961 SPARTQ8N0X7 666 aa9.63□□□□□ -0.87
SNX1-209ENST00000559961 NECAP1Q8NC96 275 aa9.63□□□□□ -0.87
SNX1-209ENST00000559961 ADAD2Q8NCV1 583 aaKnown RBP9.63□□□□□ -0.87
SNX1-209ENST00000559961 OR2K2Q8NGT1 345 aa9.63□□□□□ -0.87
SNX1-209ENST00000559961 DYNLRB2Q8TF09 96 aa9.63□□□□□ -0.87
SNX1-209ENST00000559961 DDB2Q92466 427 aa9.63□□□□□ -0.87
SNX1-209ENST00000559961 ISOC1Q96CN7 298 aa9.63□□□□□ -0.87
SNX1-209ENST00000559961 KCTD12Q96CX2 325 aaKnown RBP9.63□□□□□ -0.87
SNX1-209ENST00000559961 SPATA25Q9BR10 227 aa9.63□□□□□ -0.87
SNX1-209ENST00000559961 ZNF430Q9H8G1 570 aaPredicted RBP9.63□□□□□ -0.87
SNX1-209ENST00000559961 ANXA10Q9UJ72 324 aa9.63□□□□□ -0.87
SNX1-209ENST00000559961 SPATA2Q9UM82 520 aa9.63□□□□□ -0.87
SNX1-209ENST00000559961 RBMX2Q9Y388 322 aaKnown RBP9.63□□□□□ -0.87
SNX1-209ENST00000559961 TMEM235A6NFC5 223 aa9.62□□□□□ -0.87
SNX1-209ENST00000559961 LINC00473A8K010 186 aa9.62□□□□□ -0.87
SNX1-209ENST00000559961 CYB5BO43169 146 aa9.62□□□□□ -0.87
SNX1-209ENST00000559961 SAA1P0DJI8 122 aaPredicted RBP9.62□□□□□ -0.87
SNX1-209ENST00000559961 DEFA4P12838 97 aa9.62□□□□□ -0.87
SNX1-209ENST00000559961 SCAND1P57086 179 aa9.62□□□□□ -0.87
SNX1-209ENST00000559961 OR2B11Q5JQS5 317 aa9.62□□□□□ -0.87
SNX1-209ENST00000559961 SFXN4Q6P4A7 337 aa9.62□□□□□ -0.87
SNX1-209ENST00000559961 ZNF66Q6ZN08 573 aa9.62□□□□□ -0.87
SNX1-209ENST00000559961 HAPLN4Q86UW8 402 aa9.62□□□□□ -0.87
SNX1-209ENST00000559961 TTC9CQ8N5M4 171 aa9.62□□□□□ -0.87
SNX1-209ENST00000559961 NUDCD2Q8WVJ2 157 aa9.62□□□□□ -0.87
SNX1-209ENST00000559961 BORCS5Q969J3 196 aa9.62□□□□□ -0.87
SNX1-209ENST00000559961 FYTTD1Q96QD9 318 aaKnown RBP9.62□□□□□ -0.87
SNX1-209ENST00000559961 OR2A7Q96R45 310 aa9.62□□□□□ -0.87
SNX1-209ENST00000559961 AKIP1Q9NQ31 210 aa9.62□□□□□ -0.87
SNX1-209ENST00000559961 RHBDL2Q9NX52 303 aa9.62□□□□□ -0.87
SNX1-209ENST00000559961 SLC2A8Q9NY64 477 aa9.62□□□□□ -0.87
SNX1-209ENST00000559961 SIGLEC8Q9NYZ4 499 aa9.62□□□□□ -0.87
SNX1-209ENST00000559961 ZNF257Q9Y2Q1 563 aa9.62□□□□□ -0.87
SNX1-209ENST00000559961 ETV7Q9Y603 341 aa9.62□□□□□ -0.87
SNX1-209ENST00000559961 TRAV18A0A075B6X5 111 aa9.61□□□□□ -0.87
SNX1-209ENST00000559961 LOC100506127A0A0U1RQW1 187 aa9.61□□□□□ -0.87
SNX1-209ENST00000559961 SHISA3A0PJX4 238 aa9.61□□□□□ -0.87
SNX1-209ENST00000559961 A8MZ25 164 aa9.61□□□□□ -0.87
SNX1-209ENST00000559961 TPPPO94811 219 aa9.61□□□□□ -0.87
SNX1-209ENST00000559961 SNRPBP14678 240 aaKnown RBP9.61□□□□□ -0.87
SNX1-209ENST00000559961 CBX5P45973 191 aa9.61□□□□□ -0.87
SNX1-209ENST00000559961 RPL27AP46776 148 aaKnown RBP9.61□□□□□ -0.87
SNX1-209ENST00000559961 MXD1Q05195 221 aa9.61□□□□□ -0.87
SNX1-209ENST00000559961 CATR1Q13166 79 aa9.61□□□□□ -0.87
SNX1-209ENST00000559961 DYRK1AQ13627 763 aa9.61□□□□□ -0.87
SNX1-209ENST00000559961 FAM106AQ4KMX7 169 aa9.61□□□□□ -0.87
SNX1-209ENST00000559961 IDNKQ5T6J7 187 aa9.61□□□□□ -0.87
SNX1-209ENST00000559961 MFSD4AQ8N468 514 aa9.61□□□□□ -0.87
SNX1-209ENST00000559961 ZBTB34Q8NCN2 500 aa9.61□□□□□ -0.87
SNX1-209ENST00000559961 TAS2R8Q9NYW2 309 aa9.61□□□□□ -0.87
SNX1-209ENST00000559961 IGKV1D-8A0A087WSZ0 117 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.6□□□□□ -0.87
SNX1-209ENST00000559961 A0A0A6YYH2 397 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 A6NJ64 397 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 TMEM127O75204 238 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 GGCTO75223 188 aaKnown RBP9.6□□□□□ -0.87
SNX1-209ENST00000559961 OR2J3O76001 311 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 KBTBD11O94819 623 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 CSN3P07498 182 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 HIST1H1BP16401 226 aaKnown RBP9.6□□□□□ -0.87
SNX1-209ENST00000559961 SDC2P34741 201 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 SSBP2P81877 361 aaPredicted RBP9.6□□□□□ -0.87
SNX1-209ENST00000559961 C15orf32Q32M92 178 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 TIMM50Q3ZCQ8 353 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 CASC10Q5T4H9 136 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 CROCCP3Q8IVE0 287 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 BEST4Q8NFU0 473 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 LGALS14Q8TCE9 139 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 SECTM1Q8WVN6 248 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 C5orf30Q96GV9 206 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 CITED4Q96RK1 184 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 HRASLSQ9HDD0 168 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 VCX3AQ9NNX9 186 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 FBXL7Q9UJT9 491 aa9.6□□□□□ -0.87
SNX1-209ENST00000559961 ELF5Q9UKW6 265 aaPredicted RBP9.6□□□□□ -0.87
SNX1-209ENST00000559961 DNAH9Q9NYC9 4486 aa9.59□□□□□ -0.87
SNX1-209ENST00000559961 ATP6V1G2O95670 118 aa9.59□□□□□ -0.87
SNX1-209ENST00000559961 PRH1P02810 166 aa9.59□□□□□ -0.87
SNX1-209ENST00000559961 FCGR2CP31995 323 aa9.59□□□□□ -0.87
SNX1-209ENST00000559961 CD81P60033 236 aa9.59□□□□□ -0.87
SNX1-209ENST00000559961 RPL8P62917 257 aaKnown RBP9.59□□□□□ -0.87
SNX1-209ENST00000559961 DEFA5Q01523 94 aa9.59□□□□□ -0.87
SNX1-209ENST00000559961 GUCA2BQ16661 112 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms