RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 TSPAN32Q96QS1 320 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 GPR84Q9NQS5 396 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 BIN3Q9NQY0 253 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 DAZ1Q9NQZ3 744 aaKnown RBP2.15□□□□□ -2.07
SPG11-218ENST00000559754 C14orf105Q9NVL8 296 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 PYCARDQ9ULZ3 195 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 COQ4Q9Y3A0 265 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 LINC00588Q9Y4M8 146 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 OR51B4Q9Y5P0 310 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 RALGAPA2Q2PPJ7 1873 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 HECW2Q9P2P5 1572 aa2.15□□□□□ -2.07
SPG11-218ENST00000559754 A0A1B0GW54 56 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 ZNF729A6NN14 1252 aaPredicted RBP2.14□□□□□ -2.07
SPG11-218ENST00000559754 PPP5D1E7EU14 171 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 COX7A2LO14548 114 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 IGKV1D-33P01593 117 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 IGKV1-33P01594 117 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 TRGV3P03979 118 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 IGLV7-43P04211 117 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 SERPINE1P05121 402 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 SULT1A3P0DMM9 295 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 SULT1A4P0DMN0 295 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 MUC1P15941 1255 aaPredicted RBP2.14□□□□□ -2.07
SPG11-218ENST00000559754 PPP1CCP36873 323 aaKnown RBP2.14□□□□□ -2.07
SPG11-218ENST00000559754 GABRA4P48169 554 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 ZNF140P52738 457 aaPredicted RBP2.14□□□□□ -2.07
SPG11-218ENST00000559754 TCTAP57738 103 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 FKBP1AP62942 108 aaKnown RBP2.14□□□□□ -2.07
SPG11-218ENST00000559754 GNA12Q03113 381 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 C9orf64Q5T6V5 341 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 TBPL2Q6SJ96 375 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 SCXQ7RTU7 201 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 ANKRD29Q8N6D5 301 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 ZFAND2AQ8N6M9 145 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 GDPD1Q8N9F7 314 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 OR11H6Q8NGC7 330 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 OR10A6Q8NH74 314 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 OR13C6PQ8NH95 151 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 KLF14Q8TD94 323 aaPredicted RBP2.14□□□□□ -2.07
SPG11-218ENST00000559754 GNPDA2Q8TDQ7 276 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 GINS3Q9BRX5 216 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 TMEM147Q9BVK8 224 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 COMMD5Q9GZQ3 224 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 VCXQ9H320 206 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 CXorf21Q9HAI6 301 aa2.14□□□□□ -2.07
SPG11-218ENST00000559754 ZNF638Q14966 1978 aaKnown RBP2.14□□□□□ -2.07
SPG11-218ENST00000559754 ADAMTSL1Q8N6G6 1762 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 TRBV24-1A0A075B6N3 115 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 LOC105371267A0A1B0GV96 52 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 OR11H12B2RN74 326 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 H3BMM0 161 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 LST1O00453 97 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 SH2D1AO60880 128 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 ZNF324O75467 553 aaPredicted RBP2.13□□□□□ -2.07
SPG11-218ENST00000559754 IFNA21P01568 189 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 IGHV3-30-3P0DP02 117 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 NPY1RP25929 384 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 SERPINB1P30740 379 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 OR8G1Q15617 311 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 CST6Q15828 149 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 GRK1Q15835 563 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 KCNJ8Q15842 424 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 MRPL51Q4U2R6 128 aaKnown RBP2.13□□□□□ -2.07
SPG11-218ENST00000559754 LINC00483Q53H64 154 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 TNFAIP8L3Q5GJ75 292 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 C10orf91Q5T1B1 145 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 GLT8D1Q68CQ7 371 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 SLC25A34Q6PIV7 304 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 Q6ZQT7 251 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 GOLT1AQ6ZVE7 132 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 PHF13Q86YI8 300 aaPredicted RBP2.13□□□□□ -2.07
SPG11-218ENST00000559754 SMIM20Q8N5G0 67 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 OR11H1Q8NG94 326 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 OR11H2Q8NH07 326 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 SGMS2Q8NHU3 365 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 CD200R1Q8TD46 325 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 KLK6Q92876 244 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 HIST1H2BAQ96A08 127 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 UBE2WQ96B02 151 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 C12orf43Q96C57 262 aaKnown RBP2.13□□□□□ -2.07
SPG11-218ENST00000559754 RNASE7Q9H1E1 156 aaKnown RBP2.13□□□□□ -2.07
SPG11-218ENST00000559754 PARVBQ9HBI1 364 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 C8orf4Q9NR00 106 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 KLK5Q9Y337 293 aaPredicted RBP2.13□□□□□ -2.07
SPG11-218ENST00000559754 UFC1Q9Y3C8 167 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 ICOSQ9Y6W8 199 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 S4R3C0 116 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 SSH2Q76I76 1423 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 DOCK6Q96HP0 2047 aa2.13□□□□□ -2.07
SPG11-218ENST00000559754 KIF13BQ9NQT8 1826 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 ROBO3Q96MS0 1386 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.12□□□□□ -2.07
SPG11-218ENST00000559754 YTHDC2Q9H6S0 1430 aaKnown RBP2.12□□□□□ -2.07
SPG11-218ENST00000559754 IGKV1OR2-108A0A075B7D4 117 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 A8MUN3 132 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 A8MUU9 505 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 C9JCJ5 164 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 S1PR2O95136 353 aa2.12□□□□□ -2.07
SPG11-218ENST00000559754 CRYZL1O95825 349 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms