RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 ST6GALNAC5Q9BVH7 336 aa11.38□□□□□ -0.59
LRRC28-213ENST00000559399 ZNF430Q9H8G1 570 aaPredicted RBP11.38□□□□□ -0.59
LRRC28-213ENST00000559399 AKIP1Q9NQ31 210 aa11.38□□□□□ -0.59
LRRC28-213ENST00000559399 MRPS7Q9Y2R9 242 aaKnown RBP11.38□□□□□ -0.59
LRRC28-213ENST00000559399 PRELID3BQ9Y3B1 194 aa11.38□□□□□ -0.59
LRRC28-213ENST00000559399 OR2W1Q9Y3N9 320 aa11.38□□□□□ -0.59
LRRC28-213ENST00000559399 NOTOA8MTQ0 251 aa11.37□□□□□ -0.59
LRRC28-213ENST00000559399 J3QRK9 145 aa11.37□□□□□ -0.59
LRRC28-213ENST00000559399 MRPS14O60783 128 aaKnown RBP11.37□□□□□ -0.59
LRRC28-213ENST00000559399 FCGR3BO75015 233 aa11.37□□□□□ -0.59
LRRC28-213ENST00000559399 TUSC2O75896 110 aa11.37□□□□□ -0.59
LRRC28-213ENST00000559399 SCGNO76038 276 aa11.37□□□□□ -0.59
LRRC28-213ENST00000559399 CSN3P07498 182 aa11.37□□□□□ -0.59
LRRC28-213ENST00000559399 NFYAP23511 347 aaPredicted RBP11.37□□□□□ -0.59
LRRC28-213ENST00000559399 GABARAPL2P60520 117 aa11.37□□□□□ -0.59
LRRC28-213ENST00000559399 EXOSC2Q13868 293 aaKnown RBP11.37□□□□□ -0.59
LRRC28-213ENST00000559399 MMD2Q8IY49 270 aa11.37□□□□□ -0.59
LRRC28-213ENST00000559399 ISOC1Q96CN7 298 aa11.37□□□□□ -0.59
LRRC28-213ENST00000559399 DCSTAMPQ9H295 470 aa11.37□□□□□ -0.59
LRRC28-213ENST00000559399 PEMTQ9UBM1 199 aa11.37□□□□□ -0.59
LRRC28-213ENST00000559399 RAB26Q9ULW5 256 aa11.37□□□□□ -0.59
LRRC28-213ENST00000559399 RBMX2Q9Y388 322 aaKnown RBP11.37□□□□□ -0.59
LRRC28-213ENST00000559399 SLC22A5O76082 557 aa11.36□□□□□ -0.59
LRRC28-213ENST00000559399 HLA-DQB1P01920 261 aa11.36□□□□□ -0.59
LRRC28-213ENST00000559399 PRH1P02810 166 aa11.36□□□□□ -0.59
LRRC28-213ENST00000559399 ZNF45Q02386 682 aa11.36□□□□□ -0.59
LRRC28-213ENST00000559399 ATP5G2Q06055 141 aa11.36□□□□□ -0.59
LRRC28-213ENST00000559399 OR2B11Q5JQS5 317 aa11.36□□□□□ -0.59
LRRC28-213ENST00000559399 C10orf55Q5SWW7 151 aa11.36□□□□□ -0.59
LRRC28-213ENST00000559399 UBE2UQ5VVX9 321 aa11.36□□□□□ -0.59
LRRC28-213ENST00000559399 NUDCD2Q8WVJ2 157 aa11.36□□□□□ -0.59
LRRC28-213ENST00000559399 SPATA25Q9BR10 227 aa11.36□□□□□ -0.59
LRRC28-213ENST00000559399 THAP7Q9BT49 309 aaPredicted RBP11.36□□□□□ -0.59
LRRC28-213ENST00000559399 TRBV9A0A0B4J1U6 114 aa11.35□□□□□ -0.59
LRRC28-213ENST00000559399 TMEM235A6NFC5 223 aa11.35□□□□□ -0.59
LRRC28-213ENST00000559399 BMPR1BO00238 502 aa11.35□□□□□ -0.59
LRRC28-213ENST00000559399 AIREO43918 545 aa11.35□□□□□ -0.59
LRRC28-213ENST00000559399 PSMB9P28065 219 aa11.35□□□□□ -0.59
LRRC28-213ENST00000559399 FGF9P31371 208 aaPredicted RBP11.35□□□□□ -0.59
LRRC28-213ENST00000559399 GNG2P59768 71 aa11.35□□□□□ -0.59
LRRC28-213ENST00000559399 CNIH2Q6PI25 160 aa11.35□□□□□ -0.59
LRRC28-213ENST00000559399 TTC9CQ8N5M4 171 aa11.35□□□□□ -0.59
LRRC28-213ENST00000559399 NECAP1Q8NC96 275 aa11.35□□□□□ -0.59
LRRC28-213ENST00000559399 OR2K2Q8NGT1 345 aa11.35□□□□□ -0.59
LRRC28-213ENST00000559399 OR4S2Q8NH73 311 aa11.35□□□□□ -0.59
LRRC28-213ENST00000559399 TUBA4BQ9H853 241 aa11.35□□□□□ -0.59
LRRC28-213ENST00000559399 EDA2RQ9HAV5 297 aa11.35□□□□□ -0.59
LRRC28-213ENST00000559399 TXNL4BQ9NX01 149 aaKnown RBP11.35□□□□□ -0.59
LRRC28-213ENST00000559399 DAPK2Q9UIK4 370 aa11.35□□□□□ -0.59
LRRC28-213ENST00000559399 ANXA10Q9UJ72 324 aa11.35□□□□□ -0.59
LRRC28-213ENST00000559399 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.34□□□□□ -0.59
LRRC28-213ENST00000559399 IGKV1D-13A0A0B4J2D9 117 aa11.34□□□□□ -0.59
LRRC28-213ENST00000559399 IGLV2-14P01704 120 aa11.34□□□□□ -0.59
LRRC28-213ENST00000559399 IGKV1-13P0DP09 117 aa11.34□□□□□ -0.59
LRRC28-213ENST00000559399 RPL30P62888 115 aaKnown RBP11.34□□□□□ -0.59
LRRC28-213ENST00000559399 HAGHQ16775 308 aa11.34□□□□□ -0.59
LRRC28-213ENST00000559399 C15orf32Q32M92 178 aa11.34□□□□□ -0.59
LRRC28-213ENST00000559399 FAM209BQ5JX69 171 aa11.34□□□□□ -0.59
LRRC28-213ENST00000559399 ZFAND6Q6FIF0 208 aa11.34□□□□□ -0.59
LRRC28-213ENST00000559399 SLC25A42Q86VD7 318 aa11.34□□□□□ -0.59
LRRC28-213ENST00000559399 TPRA1Q86W33 373 aa11.34□□□□□ -0.59
LRRC28-213ENST00000559399 VKORC1L1Q8N0U8 176 aa11.34□□□□□ -0.59
LRRC28-213ENST00000559399 SPARTQ8N0X7 666 aa11.34□□□□□ -0.59
LRRC28-213ENST00000559399 VSTM2AQ8TAG5 236 aa11.34□□□□□ -0.59
LRRC28-213ENST00000559399 LGALS14Q8TCE9 139 aa11.34□□□□□ -0.59
LRRC28-213ENST00000559399 TCTEX1D2Q8WW35 142 aa11.34□□□□□ -0.59
LRRC28-213ENST00000559399 FCGR1BQ92637 280 aa11.34□□□□□ -0.59
LRRC28-213ENST00000559399 HSD17B10Q99714 261 aaKnown RBP11.34□□□□□ -0.59
LRRC28-213ENST00000559399 OR51E2Q9H255 320 aa11.34□□□□□ -0.59
LRRC28-213ENST00000559399 ZNF257Q9Y2Q1 563 aa11.34□□□□□ -0.59
LRRC28-213ENST00000559399 RYR2Q92736 4967 aa11.33□□□□□ -0.6
LRRC28-213ENST00000559399 IZUMO1RA6ND01 250 aa11.33□□□□□ -0.6
LRRC28-213ENST00000559399 OR2J3O76001 311 aa11.33□□□□□ -0.6
LRRC28-213ENST00000559399 SFXN4Q6P4A7 337 aa11.33□□□□□ -0.6
LRRC28-213ENST00000559399 OR2A7Q96R45 310 aa11.33□□□□□ -0.6
LRRC28-213ENST00000559399 TAS2R8Q9NYW2 309 aa11.33□□□□□ -0.6
LRRC28-213ENST00000559399 SPATA2Q9UM82 520 aa11.33□□□□□ -0.6
LRRC28-213ENST00000559399 RRP15Q9Y3B9 282 aaKnown RBP11.33□□□□□ -0.6
LRRC28-213ENST00000559399 SORL1Q92673 2214 aa11.33□□□□□ -0.6
LRRC28-213ENST00000559399 DPPA5A6NC42 116 aa11.32□□□□□ -0.6
LRRC28-213ENST00000559399 HMX3A6NHT5 357 aa11.32□□□□□ -0.6
LRRC28-213ENST00000559399 TEX22C9J3V5 150 aa11.32□□□□□ -0.6
LRRC28-213ENST00000559399 SSX5O60225 188 aa11.32□□□□□ -0.6
LRRC28-213ENST00000559399 KBTBD11O94819 623 aa11.32□□□□□ -0.6
LRRC28-213ENST00000559399 RPL27AP46776 148 aaKnown RBP11.32□□□□□ -0.6
LRRC28-213ENST00000559399 MECP2P51608 486 aaKnown RBP11.32□□□□□ -0.6
LRRC28-213ENST00000559399 CD81P60033 236 aa11.32□□□□□ -0.6
LRRC28-213ENST00000559399 CD300EQ496F6 205 aaPredicted RBP11.32□□□□□ -0.6
LRRC28-213ENST00000559399 ZNF66Q6ZN08 573 aa11.32□□□□□ -0.6
LRRC28-213ENST00000559399 LAX1Q8IWV1 398 aa11.32□□□□□ -0.6
LRRC28-213ENST00000559399 DYNLRB2Q8TF09 96 aa11.32□□□□□ -0.6
LRRC28-213ENST00000559399 KCTD12Q96CX2 325 aaKnown RBP11.32□□□□□ -0.6
LRRC28-213ENST00000559399 RHBDL2Q9NX52 303 aa11.32□□□□□ -0.6
LRRC28-213ENST00000559399 SSR3Q9UNL2 185 aa11.32□□□□□ -0.6
LRRC28-213ENST00000559399 LCE6AA0A183 80 aa11.31□□□□□ -0.6
LRRC28-213ENST00000559399 NPIPB5A8MRT5 1133 aa11.31□□□□□ -0.6
LRRC28-213ENST00000559399 PPP5D1E7EU14 171 aa11.31□□□□□ -0.6
LRRC28-213ENST00000559399 IFNA6P05013 189 aa11.31□□□□□ -0.6
LRRC28-213ENST00000559399 MAS1LP35410 378 aa11.31□□□□□ -0.6
LRRC28-213ENST00000559399 EIF4EBP1Q13541 118 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms