RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 CD83Q01151 205 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 TAGLNQ01995 201 aaKnown RBP8.96□□□□□ -0.98
SNX1-204ENST00000559061 RTL8BQ17RB0 113 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 LIN54Q6MZP7 749 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 LCNL1Q6ZST4 164 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 C18orf65Q6ZTR6 163 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 OR5AU1Q8NGC0 362 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 OR51S1Q8NGJ8 323 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 OSR1Q8TAX0 266 aaPredicted RBP8.96□□□□□ -0.98
SNX1-204ENST00000559061 CLCC1Q96S66 551 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 TSNAXQ99598 290 aaKnown RBP8.96□□□□□ -0.98
SNX1-204ENST00000559061 RTBDNQ9BSG5 229 aaPredicted RBP8.96□□□□□ -0.98
SNX1-204ENST00000559061 FAM103A1Q9BTL3 118 aaKnown RBP8.96□□□□□ -0.98
SNX1-204ENST00000559061 HRASLSQ9HDD0 168 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 SLC2A9Q9NRM0 540 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 SLC2A8Q9NY64 477 aa8.96□□□□□ -0.98
SNX1-204ENST00000559061 TRAV3A0A0B4J244 114 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 PSMB11A5LHX3 300 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 CGB1A6NKQ9 187 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 E7EUB6 86 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 AP4M1O00189 453 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 RBFOX2O43251 390 aaKnown RBP eCLIP8.95□□□□□ -0.98
SNX1-204ENST00000559061 FBXO24O75426 580 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 LGALS7P47929 136 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 RND3P61587 244 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 KIAA0141Q14154 515 aaPredicted RBP8.95□□□□□ -0.98
SNX1-204ENST00000559061 POU2AF1Q16633 256 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 PRSS8Q16651 343 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 C10orf55Q5SWW7 151 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 TBC1D26Q86UD7 250 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 PPP1R27Q86WC6 154 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 SLC38A6Q8IZM9 456 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 SPAG16Q8N0X2 631 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 RNF152Q8N8N0 203 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 MINDY2Q8NBR6 621 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 OR4S2Q8NH73 311 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 TERB2Q8NHR7 220 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 MARCH1Q8TCQ1 289 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 MYOZ3Q8TDC0 251 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 TMEM230Q96A57 120 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 C5orf66Q9H5L9 145 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 ZNF430Q9H8G1 570 aaPredicted RBP8.95□□□□□ -0.98
SNX1-204ENST00000559061 PARP11Q9NR21 331 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 KIAA1456Q9P272 454 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 VSIG4Q9Y279 399 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 NUBP2Q9Y5Y2 271 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 WSB1Q9Y6I7 421 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 WNK1Q9H4A3 2382 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 PKD1L1Q8TDX9 2849 aa8.95□□□□□ -0.98
SNX1-204ENST00000559061 KCNAB3O43448 404 aa8.94□□□□□ -0.98
SNX1-204ENST00000559061 IGLV1-40P01703 118 aa8.94□□□□□ -0.98
SNX1-204ENST00000559061 F2RP25116 425 aa8.94□□□□□ -0.98
SNX1-204ENST00000559061 BTCP35070 178 aa8.94□□□□□ -0.98
SNX1-204ENST00000559061 MEF2DQ14814 521 aa8.94□□□□□ -0.98
SNX1-204ENST00000559061 SCGB2B2Q4G0G5 96 aa8.94□□□□□ -0.98
SNX1-204ENST00000559061 SPANXN2Q5MJ10 180 aa8.94□□□□□ -0.98
SNX1-204ENST00000559061 ZNF562Q6V9R5 426 aa8.94□□□□□ -0.98
SNX1-204ENST00000559061 TEX45Q8NA69 505 aa8.94□□□□□ -0.98
SNX1-204ENST00000559061 CHPT1Q8WUD6 406 aa8.94□□□□□ -0.98
SNX1-204ENST00000559061 TP53RKQ96S44 253 aa8.94□□□□□ -0.98
SNX1-204ENST00000559061 KLK15Q9H2R5 256 aa8.94□□□□□ -0.98
SNX1-204ENST00000559061 PTTG2Q9NZH5 202 aa8.94□□□□□ -0.98
SNX1-204ENST00000559061 PRELID3BQ9Y3B1 194 aa8.94□□□□□ -0.98
SNX1-204ENST00000559061 RBMXL2O75526 392 aaKnown RBP8.93□□□□□ -0.98
SNX1-204ENST00000559061 KBTBD11O94819 623 aa8.93□□□□□ -0.98
SNX1-204ENST00000559061 IGHG4P01861 327 aa8.93□□□□□ -0.98
SNX1-204ENST00000559061 IFNA6P05013 189 aa8.93□□□□□ -0.98
SNX1-204ENST00000559061 CTSDP07339 412 aaPredicted RBP8.93□□□□□ -0.98
SNX1-204ENST00000559061 PSMB8P28062 276 aa8.93□□□□□ -0.98
SNX1-204ENST00000559061 KIR2DS2P43631 304 aa8.93□□□□□ -0.98
SNX1-204ENST00000559061 PIGPP57054 158 aa8.93□□□□□ -0.98
SNX1-204ENST00000559061 CATR1Q13166 79 aa8.93□□□□□ -0.98
SNX1-204ENST00000559061 ARSJQ5FYB0 599 aaPredicted RBP8.93□□□□□ -0.98
SNX1-204ENST00000559061 PRR31Q5SQ13 230 aa8.93□□□□□ -0.98
SNX1-204ENST00000559061 OR4A47Q6IF82 309 aa8.93□□□□□ -0.98
SNX1-204ENST00000559061 CENPVQ7Z7K6 275 aaPredicted RBP8.93□□□□□ -0.98
SNX1-204ENST00000559061 FOXRED2Q8IWF2 684 aa8.93□□□□□ -0.98
SNX1-204ENST00000559061 GDPD1Q8N9F7 314 aa8.93□□□□□ -0.98
SNX1-204ENST00000559061 ADAD2Q8NCV1 583 aaKnown RBP8.93□□□□□ -0.98
SNX1-204ENST00000559061 SGMS2Q8NHU3 365 aa8.93□□□□□ -0.98
SNX1-204ENST00000559061 TMEM167AQ8TBQ9 72 aa8.93□□□□□ -0.98
SNX1-204ENST00000559061 CASTOR1Q8WTX7 329 aa8.93□□□□□ -0.98
SNX1-204ENST00000559061 ARPC1AQ92747 370 aa8.93□□□□□ -0.98
SNX1-204ENST00000559061 RHOVQ96L33 236 aa8.93□□□□□ -0.98
SNX1-204ENST00000559061 PLEKHA2Q9HB19 425 aa8.93□□□□□ -0.98
SNX1-204ENST00000559061 GPR132Q9UNW8 380 aa8.93□□□□□ -0.98
SNX1-204ENST00000559061 TRAV41A0A0B4J266 112 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 DBX1A6NMT0 343 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 DISC1C4P0D8 188 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 TEX22C9J3V5 150 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 MPPED1O15442 326 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 PLA2G10O15496 165 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 HPRT1P00492 218 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 RPLP1P05386 114 aaKnown RBP8.92□□□□□ -0.98
SNX1-204ENST00000559061 P0C879 139 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 IL7P13232 177 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 PGAM2P15259 253 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 RPA2P15927 270 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 LPAR6P43657 344 aa8.92□□□□□ -0.98
SNX1-204ENST00000559061 TAS2R31P59538 309 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms