RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 CMTM1Q8IZ96 169 aa9.81□□□□□ -0.84
LRRC28-206ENST00000558471 VKORC1L1Q8N0U8 176 aa9.81□□□□□ -0.84
LRRC28-206ENST00000558471 OR4X2Q8NGF9 303 aa9.81□□□□□ -0.84
LRRC28-206ENST00000558471 OR4C16Q8NGL9 310 aa9.81□□□□□ -0.84
LRRC28-206ENST00000558471 TERB2Q8NHR7 220 aa9.81□□□□□ -0.84
LRRC28-206ENST00000558471 GON7Q9BXV9 100 aa9.81□□□□□ -0.84
LRRC28-206ENST00000558471 ZNF580Q9UK33 172 aa9.81□□□□□ -0.84
LRRC28-206ENST00000558471 TCRBV4S1A1TA0A5B7 111 aa9.8□□□□□ -0.84
LRRC28-206ENST00000558471 M0QZ24 198 aa9.8□□□□□ -0.84
LRRC28-206ENST00000558471 ARPC1BO15143 372 aaKnown RBP9.8□□□□□ -0.84
LRRC28-206ENST00000558471 RBFOX2O43251 390 aaKnown RBP eCLIP9.8□□□□□ -0.84
LRRC28-206ENST00000558471 SAA1P0DJI8 122 aaPredicted RBP9.8□□□□□ -0.84
LRRC28-206ENST00000558471 VDAC1P21796 283 aa9.8□□□□□ -0.84
LRRC28-206ENST00000558471 FXYD3Q14802 87 aa9.8□□□□□ -0.84
LRRC28-206ENST00000558471 NSUN5P1Q3KNT7 163 aa9.8□□□□□ -0.84
LRRC28-206ENST00000558471 SCGB2B2Q4G0G5 96 aa9.8□□□□□ -0.84
LRRC28-206ENST00000558471 SPANXN2Q5MJ10 180 aa9.8□□□□□ -0.84
LRRC28-206ENST00000558471 PRR31Q5SQ13 230 aa9.8□□□□□ -0.84
LRRC28-206ENST00000558471 SLC38A6Q8IZM9 456 aa9.8□□□□□ -0.84
LRRC28-206ENST00000558471 Q8N402 240 aa9.8□□□□□ -0.84
LRRC28-206ENST00000558471 MRGPRFQ96AM1 343 aa9.8□□□□□ -0.84
LRRC28-206ENST00000558471 FAM103A1Q9BTL3 118 aaKnown RBP9.8□□□□□ -0.84
LRRC28-206ENST00000558471 NUBP2Q9Y5Y2 271 aa9.8□□□□□ -0.84
LRRC28-206ENST00000558471 TRAV41A0A0B4J266 112 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 DISC1C4P0D8 188 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 CNIH1O95406 144 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 TSPAN15O95858 294 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 HPRT1P00492 218 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 HRASP01112 189 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 PGAM2P15259 253 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 PI3P19957 117 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 F2RP25116 425 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 PPIFP30405 207 aaKnown RBP9.79□□□□□ -0.84
LRRC28-206ENST00000558471 CRIP2P52943 208 aaPredicted RBP9.79□□□□□ -0.84
LRRC28-206ENST00000558471 PPP5CP53041 499 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 GNB1P62873 340 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 PRSS8Q16651 343 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 C2orf68Q2NKX9 166 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 C19orf54Q5BKX5 351 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 TEX38Q6PEX7 206 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 TBC1D26Q86UD7 250 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 NDUFA11Q86Y39 141 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 COMMD1Q8N668 190 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 POC5Q8NA72 575 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 MARCH1Q8TCQ1 289 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 ABHD5Q8WTS1 349 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 ARPC1AQ92747 370 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 TRIM63Q969Q1 353 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 RHOVQ96L33 236 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 SRRQ9GZT4 340 aa9.79□□□□□ -0.84
LRRC28-206ENST00000558471 ZNF430Q9H8G1 570 aaPredicted RBP9.79□□□□□ -0.84
LRRC28-206ENST00000558471 TSSC4Q9Y5U2 329 aaPredicted RBP9.79□□□□□ -0.84
LRRC28-206ENST00000558471 A0A1W2PRX2 142 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 OR2A4O95047 310 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 IGHG4P01861 327 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 OPN1MWP04001 364 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 ELANEP08246 267 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 OPN1MW2P0DN77 364 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 OPN1MW3P0DN78 364 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 LPAR6P43657 344 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 TMEM267Q0VDI3 215 aaPredicted RBP9.78□□□□□ -0.84
LRRC28-206ENST00000558471 FOXE3Q13461 319 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 KLF9Q13886 244 aaPredicted RBP9.78□□□□□ -0.84
LRRC28-206ENST00000558471 ECSCRQ19T08 205 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 CNPY1Q3B7I2 92 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 ZNF585BQ52M93 769 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 KHDC1LQ5JSQ8 128 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 UNQ5815/PRO19632Q6UWF5 114 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 LCNL1Q6ZST4 164 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 SSX9Q7RTT3 188 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 PUSL1Q8N0Z8 303 aaKnown RBP9.78□□□□□ -0.84
LRRC28-206ENST00000558471 MINDY2Q8NBR6 621 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 LFNGQ8NES3 379 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 OR51S1Q8NGJ8 323 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 OR13C8Q8NGS7 320 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 GRPEL2Q8TAA5 225 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 CD300LFQ8TDQ1 290 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 OR2A7Q96R45 310 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 PLEKHA2Q9HB19 425 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 SLC2A9Q9NRM0 540 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 TRRAPQ9Y4A5 3859 aa9.78□□□□□ -0.84
LRRC28-206ENST00000558471 MPPED1O15442 326 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 SOX15O60248 233 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 KBTBD11O94819 623 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 S1PR2O95136 353 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 IGLV1-40P01703 118 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 RPLP1P05386 114 aaKnown RBP9.77□□□□□ -0.85
LRRC28-206ENST00000558471 PSMB8P28062 276 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 S100GP29377 79 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 PIGPP57054 158 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 TAS2R31P59538 309 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 RND3P61587 244 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 TNXAQ16473 311 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 BAK1Q16611 211 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 POU2AF1Q16633 256 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 AKIRIN2Q53H80 203 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 CXorf66Q5JRM2 361 aaPredicted RBP9.77□□□□□ -0.85
LRRC28-206ENST00000558471 TREML4Q6UXN2 200 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 MMD2Q8IY49 270 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 TOMM5Q8N4H5 51 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms