RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 NECAP1Q8NC96 275 aa10.39□□□□□ -0.75
SNRPA1-204ENST00000558020 VSTM2AQ8TAG5 236 aa10.39□□□□□ -0.75
SNRPA1-204ENST00000558020 ISOC1Q96CN7 298 aa10.39□□□□□ -0.75
SNRPA1-204ENST00000558020 SPATA25Q9BR10 227 aa10.39□□□□□ -0.75
SNRPA1-204ENST00000558020 LINC00473A8K010 186 aa10.38□□□□□ -0.75
SNRPA1-204ENST00000558020 NOTOA8MTQ0 251 aa10.38□□□□□ -0.75
SNRPA1-204ENST00000558020 FCGR3BO75015 233 aa10.38□□□□□ -0.75
SNRPA1-204ENST00000558020 IL34Q6ZMJ4 242 aa10.38□□□□□ -0.75
SNRPA1-204ENST00000558020 IDO2Q6ZQW0 420 aa10.38□□□□□ -0.75
SNRPA1-204ENST00000558020 KCTD9Q7L273 389 aa10.38□□□□□ -0.75
SNRPA1-204ENST00000558020 TPRA1Q86W33 373 aa10.38□□□□□ -0.75
SNRPA1-204ENST00000558020 OR2K2Q8NGT1 345 aa10.38□□□□□ -0.75
SNRPA1-204ENST00000558020 HSD17B10Q99714 261 aaKnown RBP10.38□□□□□ -0.75
SNRPA1-204ENST00000558020 AIFM2Q9BRQ8 373 aa10.38□□□□□ -0.75
SNRPA1-204ENST00000558020 ZNF430Q9H8G1 570 aaPredicted RBP10.38□□□□□ -0.75
SNRPA1-204ENST00000558020 RAB26Q9ULW5 256 aa10.38□□□□□ -0.75
SNRPA1-204ENST00000558020 DPPA5A6NC42 116 aa10.37□□□□□ -0.75
SNRPA1-204ENST00000558020 J3QRK9 145 aa10.37□□□□□ -0.75
SNRPA1-204ENST00000558020 DHFRP00374 187 aa10.37□□□□□ -0.75
SNRPA1-204ENST00000558020 HLA-DQB1P01920 261 aa10.37□□□□□ -0.75
SNRPA1-204ENST00000558020 CSN3P07498 182 aa10.37□□□□□ -0.75
SNRPA1-204ENST00000558020 FGF9P31371 208 aaPredicted RBP10.37□□□□□ -0.75
SNRPA1-204ENST00000558020 GABARAPL2P60520 117 aa10.37□□□□□ -0.75
SNRPA1-204ENST00000558020 CNIH2Q6PI25 160 aa10.37□□□□□ -0.75
SNRPA1-204ENST00000558020 TTC9CQ8N5M4 171 aa10.37□□□□□ -0.75
SNRPA1-204ENST00000558020 KCTD12Q96CX2 325 aaKnown RBP10.37□□□□□ -0.75
SNRPA1-204ENST00000558020 C5orf30Q96GV9 206 aa10.37□□□□□ -0.75
SNRPA1-204ENST00000558020 OR51E2Q9H255 320 aa10.37□□□□□ -0.75
SNRPA1-204ENST00000558020 AKIP1Q9NQ31 210 aa10.37□□□□□ -0.75
SNRPA1-204ENST00000558020 RYR3Q15413 4870 aa10.37□□□□□ -0.75
SNRPA1-204ENST00000558020 IGKV1D-8A0A087WSZ0 117 aa10.36□□□□□ -0.75
SNRPA1-204ENST00000558020 TRBV9A0A0B4J1U6 114 aa10.36□□□□□ -0.75
SNRPA1-204ENST00000558020 SHISA3A0PJX4 238 aa10.36□□□□□ -0.75
SNRPA1-204ENST00000558020 TRBV12-3P01733 135 aa10.36□□□□□ -0.75
SNRPA1-204ENST00000558020 SAA1P0DJI8 122 aaPredicted RBP10.36□□□□□ -0.75
SNRPA1-204ENST00000558020 NFYAP23511 347 aaPredicted RBP10.36□□□□□ -0.75
SNRPA1-204ENST00000558020 MAS1LP35410 378 aa10.36□□□□□ -0.75
SNRPA1-204ENST00000558020 GNG2P59768 71 aa10.36□□□□□ -0.75
SNRPA1-204ENST00000558020 EXOSC2Q13868 293 aaKnown RBP10.36□□□□□ -0.75
SNRPA1-204ENST00000558020 MRGPRG-AS1Q2M3A8 158 aa10.36□□□□□ -0.75
SNRPA1-204ENST00000558020 LAX1Q8IWV1 398 aa10.36□□□□□ -0.75
SNRPA1-204ENST00000558020 OR4S2Q8NH73 311 aa10.36□□□□□ -0.75
SNRPA1-204ENST00000558020 FCGR1BQ92637 280 aa10.36□□□□□ -0.75
SNRPA1-204ENST00000558020 OR2A7Q96R45 310 aa10.36□□□□□ -0.75
SNRPA1-204ENST00000558020 SLC2A8Q9NY64 477 aa10.36□□□□□ -0.75
SNRPA1-204ENST00000558020 SSR3Q9UNL2 185 aa10.36□□□□□ -0.75
SNRPA1-204ENST00000558020 ZNF257Q9Y2Q1 563 aa10.36□□□□□ -0.75
SNRPA1-204ENST00000558020 RBMX2Q9Y388 322 aaKnown RBP10.36□□□□□ -0.75
SNRPA1-204ENST00000558020 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.35□□□□□ -0.75
SNRPA1-204ENST00000558020 TPPPO94811 219 aa10.35□□□□□ -0.75
SNRPA1-204ENST00000558020 HRASP01112 189 aa10.35□□□□□ -0.75
SNRPA1-204ENST00000558020 PSMB9P28065 219 aa10.35□□□□□ -0.75
SNRPA1-204ENST00000558020 DEFA5Q01523 94 aa10.35□□□□□ -0.75
SNRPA1-204ENST00000558020 HAGHQ16775 308 aa10.35□□□□□ -0.75
SNRPA1-204ENST00000558020 C15orf32Q32M92 178 aa10.35□□□□□ -0.75
SNRPA1-204ENST00000558020 UBE2UQ5VVX9 321 aa10.35□□□□□ -0.75
SNRPA1-204ENST00000558020 TCTEX1D2Q8WW35 142 aa10.35□□□□□ -0.75
SNRPA1-204ENST00000558020 Q9H521 79 aa10.35□□□□□ -0.75
SNRPA1-204ENST00000558020 TXNL4BQ9NX01 149 aaKnown RBP10.35□□□□□ -0.75
SNRPA1-204ENST00000558020 DAPK2Q9UIK4 370 aa10.35□□□□□ -0.75
SNRPA1-204ENST00000558020 ANXA10Q9UJ72 324 aa10.35□□□□□ -0.75
SNRPA1-204ENST00000558020 ELF5Q9UKW6 265 aaPredicted RBP10.35□□□□□ -0.75
SNRPA1-204ENST00000558020 BMPR1BO00238 502 aa10.34□□□□□ -0.75
SNRPA1-204ENST00000558020 GGCTO75223 188 aaKnown RBP10.34□□□□□ -0.75
SNRPA1-204ENST00000558020 PRH1P02810 166 aa10.34□□□□□ -0.75
SNRPA1-204ENST00000558020 MECP2P51608 486 aaKnown RBP10.34□□□□□ -0.75
SNRPA1-204ENST00000558020 OR2B11Q5JQS5 317 aa10.34□□□□□ -0.75
SNRPA1-204ENST00000558020 ZNF66Q6ZN08 573 aa10.34□□□□□ -0.75
SNRPA1-204ENST00000558020 NR2C2APQ86WQ0 139 aa10.34□□□□□ -0.75
SNRPA1-204ENST00000558020 IL17DQ8TAD2 202 aa10.34□□□□□ -0.75
SNRPA1-204ENST00000558020 DYNLRB2Q8TF09 96 aa10.34□□□□□ -0.75
SNRPA1-204ENST00000558020 YTHDF1Q9BYJ9 559 aaKnown RBP10.34□□□□□ -0.75
SNRPA1-204ENST00000558020 TECRQ9NZ01 308 aaKnown RBP10.34□□□□□ -0.75
SNRPA1-204ENST00000558020 ADAM30Q9UKF2 790 aa10.34□□□□□ -0.75
SNRPA1-204ENST00000558020 SPATA2Q9UM82 520 aa10.34□□□□□ -0.75
SNRPA1-204ENST00000558020 RRP15Q9Y3B9 282 aaKnown RBP10.34□□□□□ -0.75
SNRPA1-204ENST00000558020 TNCP24821 2201 aa10.34□□□□□ -0.75
SNRPA1-204ENST00000558020 SMIM30A4D0T7 59 aa10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 TMEM235A6NFC5 223 aa10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 RBMXL2O75526 392 aaKnown RBP10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 OR2J3O76001 311 aa10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 KBTBD11O94819 623 aa10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 HIST1H1BP16401 226 aaKnown RBP10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 KIR2DS2P43631 304 aa10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 RPL27AP46776 148 aaKnown RBP10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 SCAND1P57086 179 aa10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 ARPC4P59998 168 aa10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 ZNF45Q02386 682 aa10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 FAM106AQ4KMX7 169 aa10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 ZFAND6Q6FIF0 208 aa10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 VKORC1L1Q8N0U8 176 aa10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 SPARTQ8N0X7 666 aa10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 MFSD4AQ8N468 514 aa10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 TMEM167AQ8TBQ9 72 aa10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 NUDCD2Q8WVJ2 157 aa10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 FYTTD1Q96QD9 318 aaKnown RBP10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 THAP7Q9BT49 309 aaPredicted RBP10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 EDA2RQ9HAV5 297 aa10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 SLC2A9Q9NRM0 540 aa10.33□□□□□ -0.76
SNRPA1-204ENST00000558020 FBXL7Q9UJT9 491 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms