RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 NUDT15Q9NV35 164 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 KIAA1456Q9P272 454 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 SIGLEC9Q9Y336 463 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 FCN1O00602 326 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 HPRT1P00492 218 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 IGKV1-39P01597 117 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 IGKV1D-39P04432 117 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 SAA1P0DJI8 122 aaPredicted RBP12.12□□□□□ -0.47
NEDD1-213ENST00000557644 C9orf152Q5JTZ5 239 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 ZFAND2BQ8WV99 257 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 RHOVQ96L33 236 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 CLCC1Q96S66 551 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 RASL11BQ9BPW5 248 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 ZNF702PQ9H963 129 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 PLEKHA2Q9HB19 425 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 PLXNB1O43157 2135 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 M0QZK8 103 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 SERPINE2P07093 398 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 DEFA1P59665 94 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 DEFA3P59666 94 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 PJVKQ0ZLH3 352 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 PLGLAQ15195 96 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 TMEM95Q3KNT9 176 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 SLC25A42Q86VD7 318 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 SGPP2Q8IWX5 399 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 ENKURQ8TC29 256 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 GLYATL2Q8WU03 294 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 HSPB9Q9BQS6 159 aa12.12□□□□□ -0.47
NEDD1-213ENST00000557644 LINC01548A6NM66 108 aa12.11□□□□□ -0.47
NEDD1-213ENST00000557644 KRASP01116 189 aa12.11□□□□□ -0.47
NEDD1-213ENST00000557644 CRYGBP07316 175 aa12.11□□□□□ -0.47
NEDD1-213ENST00000557644 G6PCP35575 357 aa12.11□□□□□ -0.47
NEDD1-213ENST00000557644 RAB25P57735 213 aa12.11□□□□□ -0.47
NEDD1-213ENST00000557644 RPL15P61313 204 aaKnown RBP12.11□□□□□ -0.47
NEDD1-213ENST00000557644 PPP1R1AQ13522 171 aa12.11□□□□□ -0.47
NEDD1-213ENST00000557644 TMEM128Q5BJH2 165 aa12.11□□□□□ -0.47
NEDD1-213ENST00000557644 TCTEX1D1Q8N7M0 179 aa12.11□□□□□ -0.47
NEDD1-213ENST00000557644 SPDEFO95238 335 aa12.11□□□□□ -0.47
NEDD1-213ENST00000557644 VAMP1P23763 118 aa12.11□□□□□ -0.47
NEDD1-213ENST00000557644 UCP1P25874 307 aa12.11□□□□□ -0.47
NEDD1-213ENST00000557644 TAS2R31P59538 309 aa12.11□□□□□ -0.47
NEDD1-213ENST00000557644 UBE2KP61086 200 aa12.11□□□□□ -0.47
NEDD1-213ENST00000557644 TRIM16LQ309B1 348 aa12.11□□□□□ -0.47
NEDD1-213ENST00000557644 LIN54Q6MZP7 749 aa12.11□□□□□ -0.47
NEDD1-213ENST00000557644 LHFPL5Q8TAF8 219 aa12.11□□□□□ -0.47
NEDD1-213ENST00000557644 R3HDM4Q96D70 268 aa12.11□□□□□ -0.47
NEDD1-213ENST00000557644 TMEM222Q9H0R3 208 aa12.11□□□□□ -0.47
NEDD1-213ENST00000557644 MARCH11A6NNE9 402 aa12.1□□□□□ -0.47
NEDD1-213ENST00000557644 HRASP01112 189 aa12.1□□□□□ -0.47
NEDD1-213ENST00000557644 NQO2P16083 231 aa12.1□□□□□ -0.47
NEDD1-213ENST00000557644 DHODHQ02127 395 aa12.1□□□□□ -0.47
NEDD1-213ENST00000557644 MRGPRG-AS1Q2M3A8 158 aa12.1□□□□□ -0.47
NEDD1-213ENST00000557644 GALNT14Q96FL9 552 aa12.1□□□□□ -0.47
NEDD1-213ENST00000557644 PRSS22Q9GZN4 317 aa12.1□□□□□ -0.47
NEDD1-213ENST00000557644 COL6A5A8TX70 2615 aa12.1□□□□□ -0.47
NEDD1-213ENST00000557644 TNCP24821 2201 aa12.1□□□□□ -0.47
NEDD1-213ENST00000557644 TSPAN9O75954 239 aa12.1□□□□□ -0.47
NEDD1-213ENST00000557644 SPNP16150 400 aa12.1□□□□□ -0.47
NEDD1-213ENST00000557644 RAG2P55895 527 aa12.1□□□□□ -0.47
NEDD1-213ENST00000557644 DCTN2Q13561 401 aaKnown RBP12.1□□□□□ -0.47
NEDD1-213ENST00000557644 TMEM187Q14656 261 aa12.1□□□□□ -0.47
NEDD1-213ENST00000557644 VMA21Q3ZAQ7 101 aa12.1□□□□□ -0.47
NEDD1-213ENST00000557644 OR4A47Q6IF82 309 aa12.1□□□□□ -0.47
NEDD1-213ENST00000557644 PPP1R27Q86WC6 154 aa12.1□□□□□ -0.47
NEDD1-213ENST00000557644 DMBX1Q8NFW5 382 aa12.1□□□□□ -0.47
NEDD1-213ENST00000557644 FAM212BQ9NTI7 297 aaPredicted RBP12.1□□□□□ -0.47
NEDD1-213ENST00000557644 COMMD9Q9P000 198 aa12.1□□□□□ -0.47
NEDD1-213ENST00000557644 HKR1P10072 659 aa12.09□□□□□ -0.47
NEDD1-213ENST00000557644 DUSP18Q8NEJ0 188 aa12.09□□□□□ -0.47
NEDD1-213ENST00000557644 RANBP3Q9H6Z4 567 aaPredicted RBP12.09□□□□□ -0.47
NEDD1-213ENST00000557644 PALMDQ9NP74 551 aa12.09□□□□□ -0.47
NEDD1-213ENST00000557644 KCNIP3Q9Y2W7 256 aa12.09□□□□□ -0.47
NEDD1-213ENST00000557644 IGHV7-81A0A0B4J1V7 117 aa12.08□□□□□ -0.47
NEDD1-213ENST00000557644 TRAV3A0A0B4J244 114 aa12.08□□□□□ -0.47
NEDD1-213ENST00000557644 OR2A4O95047 310 aa12.08□□□□□ -0.47
NEDD1-213ENST00000557644 CDS2O95674 445 aa12.08□□□□□ -0.47
NEDD1-213ENST00000557644 CA2P00918 260 aa12.08□□□□□ -0.47
NEDD1-213ENST00000557644 OR4E1P0C645 316 aa12.08□□□□□ -0.47
NEDD1-213ENST00000557644 RIPPLY3P57055 190 aa12.08□□□□□ -0.47
NEDD1-213ENST00000557644 SSBP2P81877 361 aaPredicted RBP12.08□□□□□ -0.47
NEDD1-213ENST00000557644 NDPQ00604 133 aa12.08□□□□□ -0.47
NEDD1-213ENST00000557644 IZUMO4Q1ZYL8 232 aa12.08□□□□□ -0.47
NEDD1-213ENST00000557644 PUSL1Q8N0Z8 303 aaKnown RBP12.08□□□□□ -0.47
NEDD1-213ENST00000557644 Q8N2B8 174 aa12.08□□□□□ -0.47
NEDD1-213ENST00000557644 TEX45Q8NA69 505 aa12.08□□□□□ -0.47
NEDD1-213ENST00000557644 CASTOR1Q8WTX7 329 aa12.08□□□□□ -0.47
NEDD1-213ENST00000557644 SEC22AQ96IW7 307 aa12.08□□□□□ -0.47
NEDD1-213ENST00000557644 OR2A7Q96R45 310 aa12.08□□□□□ -0.47
NEDD1-213ENST00000557644 C19orf24Q9BVV8 132 aa12.08□□□□□ -0.47
NEDD1-213ENST00000557644 TMEM140Q9NV12 185 aa12.08□□□□□ -0.47
NEDD1-213ENST00000557644 LINC00527Q9UJ94 153 aa12.08□□□□□ -0.47
NEDD1-213ENST00000557644 NUBP2Q9Y5Y2 271 aa12.08□□□□□ -0.47
NEDD1-213ENST00000557644 KBTBD11O94819 623 aa12.08□□□□□ -0.48
NEDD1-213ENST00000557644 NDUFA7O95182 113 aa12.08□□□□□ -0.48
NEDD1-213ENST00000557644 IGKV1-5P01602 117 aa12.08□□□□□ -0.48
NEDD1-213ENST00000557644 HLA-DRB1P01911 266 aa12.08□□□□□ -0.48
NEDD1-213ENST00000557644 H2AFB2P0C5Z0 115 aa12.08□□□□□ -0.48
NEDD1-213ENST00000557644 MDKP21741 143 aaPredicted RBP12.08□□□□□ -0.48
NEDD1-213ENST00000557644 GNB1P62873 340 aa12.08□□□□□ -0.48
NEDD1-213ENST00000557644 POU2AF1Q16633 256 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms