RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 MMD2Q8IY49 270 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 Q8N402 240 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 TTC9CQ8N5M4 171 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 ZNF645Q8N7E2 425 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 SPIN2AQ99865 258 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 SPIN2BQ9BPZ2 258 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 DCSTAMPQ9H295 470 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 ZNF430Q9H8G1 570 aaPredicted RBP12.09□□□□□ -0.47
TUBB3-213ENST00000557262 AKIP1Q9NQ31 210 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 PEMTQ9UBM1 199 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 PRELID3BQ9Y3B1 194 aa12.09□□□□□ -0.47
TUBB3-213ENST00000557262 TENM2Q9NT68 2774 aa12.08□□□□□ -0.48
TUBB3-213ENST00000557262 TRBV9A0A0B4J1U6 114 aa12.08□□□□□ -0.48
TUBB3-213ENST00000557262 AIREO43918 545 aa12.08□□□□□ -0.48
TUBB3-213ENST00000557262 MRPS14O60783 128 aaKnown RBP12.08□□□□□ -0.48
TUBB3-213ENST00000557262 FCGR3BO75015 233 aa12.08□□□□□ -0.48
TUBB3-213ENST00000557262 HLA-DQB1P01920 261 aa12.08□□□□□ -0.48
TUBB3-213ENST00000557262 SAA1P0DJI8 122 aaPredicted RBP12.08□□□□□ -0.48
TUBB3-213ENST00000557262 MECP2P51608 486 aaKnown RBP12.08□□□□□ -0.48
TUBB3-213ENST00000557262 HAGHQ16775 308 aa12.08□□□□□ -0.48
TUBB3-213ENST00000557262 HACD4Q5VWC8 232 aa12.08□□□□□ -0.48
TUBB3-213ENST00000557262 GTSCR1Q86UQ5 136 aa12.08□□□□□ -0.48
TUBB3-213ENST00000557262 THAP7Q9BT49 309 aaPredicted RBP12.08□□□□□ -0.48
TUBB3-213ENST00000557262 TUBA4BQ9H853 241 aa12.08□□□□□ -0.48
TUBB3-213ENST00000557262 RBMX2Q9Y388 322 aaKnown RBP12.08□□□□□ -0.48
TUBB3-213ENST00000557262 SACSQ9NZJ4 4579 aa12.07□□□□□ -0.48
TUBB3-213ENST00000557262 NOTOA8MTQ0 251 aa12.07□□□□□ -0.48
TUBB3-213ENST00000557262 PRH1P02810 166 aa12.07□□□□□ -0.48
TUBB3-213ENST00000557262 CD36P16671 472 aa12.07□□□□□ -0.48
TUBB3-213ENST00000557262 NFYAP23511 347 aaPredicted RBP12.07□□□□□ -0.48
TUBB3-213ENST00000557262 FGF9P31371 208 aaPredicted RBP12.07□□□□□ -0.48
TUBB3-213ENST00000557262 ZNF45Q02386 682 aa12.07□□□□□ -0.48
TUBB3-213ENST00000557262 CNIH2Q6PI25 160 aa12.07□□□□□ -0.48
TUBB3-213ENST00000557262 OR2K2Q8NGT1 345 aa12.07□□□□□ -0.48
TUBB3-213ENST00000557262 SPATA25Q9BR10 227 aa12.07□□□□□ -0.48
TUBB3-213ENST00000557262 OR51E2Q9H255 320 aa12.07□□□□□ -0.48
TUBB3-213ENST00000557262 EDA2RQ9HAV5 297 aa12.07□□□□□ -0.48
TUBB3-213ENST00000557262 RAB26Q9ULW5 256 aa12.07□□□□□ -0.48
TUBB3-213ENST00000557262 MRPS7Q9Y2R9 242 aaKnown RBP12.07□□□□□ -0.48
TUBB3-213ENST00000557262 TNCP24821 2201 aa12.06□□□□□ -0.48
TUBB3-213ENST00000557262 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.06□□□□□ -0.48
TUBB3-213ENST00000557262 SMIM30A4D0T7 59 aa12.06□□□□□ -0.48
TUBB3-213ENST00000557262 IZUMO1RA6ND01 250 aa12.06□□□□□ -0.48
TUBB3-213ENST00000557262 BMPR1BO00238 502 aa12.06□□□□□ -0.48
TUBB3-213ENST00000557262 TUSC2O75896 110 aa12.06□□□□□ -0.48
TUBB3-213ENST00000557262 SCGNO76038 276 aa12.06□□□□□ -0.48
TUBB3-213ENST00000557262 GABARAPL2P60520 117 aa12.06□□□□□ -0.48
TUBB3-213ENST00000557262 RPL30P62888 115 aaKnown RBP12.06□□□□□ -0.48
TUBB3-213ENST00000557262 EXOSC2Q13868 293 aaKnown RBP12.06□□□□□ -0.48
TUBB3-213ENST00000557262 UBE2UQ5VVX9 321 aa12.06□□□□□ -0.48
TUBB3-213ENST00000557262 KCTD9Q7L273 389 aa12.06□□□□□ -0.48
TUBB3-213ENST00000557262 SLC25A42Q86VD7 318 aa12.06□□□□□ -0.48
TUBB3-213ENST00000557262 TPRA1Q86W33 373 aa12.06□□□□□ -0.48
TUBB3-213ENST00000557262 NECAP1Q8NC96 275 aa12.06□□□□□ -0.48
TUBB3-213ENST00000557262 ISOC1Q96CN7 298 aa12.06□□□□□ -0.48
TUBB3-213ENST00000557262 TXNL4BQ9NX01 149 aaKnown RBP12.06□□□□□ -0.48
TUBB3-213ENST00000557262 IGLV2-14P01704 120 aa12.05□□□□□ -0.48
TUBB3-213ENST00000557262 IFNA6P05013 189 aa12.05□□□□□ -0.48
TUBB3-213ENST00000557262 FAM209BQ5JX69 171 aa12.05□□□□□ -0.48
TUBB3-213ENST00000557262 ZFAND6Q6FIF0 208 aa12.05□□□□□ -0.48
TUBB3-213ENST00000557262 NUDCD2Q8WVJ2 157 aa12.05□□□□□ -0.48
TUBB3-213ENST00000557262 KCTD12Q96CX2 325 aaKnown RBP12.05□□□□□ -0.48
TUBB3-213ENST00000557262 HSD17B10Q99714 261 aaKnown RBP12.05□□□□□ -0.48
TUBB3-213ENST00000557262 IGKV1D-13A0A0B4J2D9 117 aa12.04□□□□□ -0.48
TUBB3-213ENST00000557262 TMEM235A6NFC5 223 aa12.04□□□□□ -0.48
TUBB3-213ENST00000557262 IGKV1-13P0DP09 117 aa12.04□□□□□ -0.48
TUBB3-213ENST00000557262 GNG2P59768 71 aa12.04□□□□□ -0.48
TUBB3-213ENST00000557262 OR2B11Q5JQS5 317 aa12.04□□□□□ -0.48
TUBB3-213ENST00000557262 C10orf55Q5SWW7 151 aa12.04□□□□□ -0.48
TUBB3-213ENST00000557262 ADAMTSL5Q6ZMM2 481 aa12.04□□□□□ -0.48
TUBB3-213ENST00000557262 VKORC1L1Q8N0U8 176 aa12.04□□□□□ -0.48
TUBB3-213ENST00000557262 SPARTQ8N0X7 666 aa12.04□□□□□ -0.48
TUBB3-213ENST00000557262 MFSD4AQ8N468 514 aa12.04□□□□□ -0.48
TUBB3-213ENST00000557262 VSTM2AQ8TAG5 236 aa12.04□□□□□ -0.48
TUBB3-213ENST00000557262 OR2A7Q96R45 310 aa12.04□□□□□ -0.48
TUBB3-213ENST00000557262 DAPK2Q9UIK4 370 aa12.04□□□□□ -0.48
TUBB3-213ENST00000557262 ANXA10Q9UJ72 324 aa12.04□□□□□ -0.48
TUBB3-213ENST00000557262 SSR3Q9UNL2 185 aa12.04□□□□□ -0.48
TUBB3-213ENST00000557262 ZNF257Q9Y2Q1 563 aa12.04□□□□□ -0.48
TUBB3-213ENST00000557262 RRP15Q9Y3B9 282 aaKnown RBP12.04□□□□□ -0.48
TUBB3-213ENST00000557262 HMX3A6NHT5 357 aa12.03□□□□□ -0.48
TUBB3-213ENST00000557262 ZNF785A8K8V0 405 aa12.03□□□□□ -0.48
TUBB3-213ENST00000557262 SSX5O60225 188 aa12.03□□□□□ -0.48
TUBB3-213ENST00000557262 OR2J3O76001 311 aa12.03□□□□□ -0.48
TUBB3-213ENST00000557262 PSMB9P28065 219 aa12.03□□□□□ -0.48
TUBB3-213ENST00000557262 MAS1LP35410 378 aa12.03□□□□□ -0.48
TUBB3-213ENST00000557262 EIF4EBP1Q13541 118 aaPredicted RBP12.03□□□□□ -0.48
TUBB3-213ENST00000557262 C15orf32Q32M92 178 aa12.03□□□□□ -0.48
TUBB3-213ENST00000557262 CD300EQ496F6 205 aaPredicted RBP12.03□□□□□ -0.48
TUBB3-213ENST00000557262 ZNF66Q6ZN08 573 aa12.03□□□□□ -0.48
TUBB3-213ENST00000557262 LAX1Q8IWV1 398 aa12.03□□□□□ -0.48
TUBB3-213ENST00000557262 PUSL1Q8N0Z8 303 aaKnown RBP12.03□□□□□ -0.48
TUBB3-213ENST00000557262 OR4S2Q8NH73 311 aa12.03□□□□□ -0.48
TUBB3-213ENST00000557262 TMEM167AQ8TBQ9 72 aa12.03□□□□□ -0.48
TUBB3-213ENST00000557262 TCTEX1D2Q8WW35 142 aa12.03□□□□□ -0.48
TUBB3-213ENST00000557262 SPATA2Q9UM82 520 aa12.03□□□□□ -0.48
TUBB3-213ENST00000557262 DMRT1Q9Y5R6 373 aa12.03□□□□□ -0.48
TUBB3-213ENST00000557262 STARD9Q9P2P6 4700 aa12.03□□□□□ -0.48
TUBB3-213ENST00000557262 LCE6AA0A183 80 aa12.02□□□□□ -0.49
TUBB3-213ENST00000557262 DPPA5A6NC42 116 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms