RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 DOK5Q9P104 306 aa12.76□□□□□ -0.37
TMEM55B-207ENST00000557041 TACC2O95359 2948 aa12.76□□□□□ -0.37
TMEM55B-207ENST00000557041 C16orf97H3BN30 126 aa12.76□□□□□ -0.37
TMEM55B-207ENST00000557041 IGLV2-14P01704 120 aa12.76□□□□□ -0.37
TMEM55B-207ENST00000557041 OR4A8P0C604 315 aa12.76□□□□□ -0.37
TMEM55B-207ENST00000557041 RPL31P62899 125 aaKnown RBP12.76□□□□□ -0.37
TMEM55B-207ENST00000557041 ACOT6Q3I5F7 207 aaPredicted RBP12.76□□□□□ -0.37
TMEM55B-207ENST00000557041 SNX22Q96L94 193 aa12.76□□□□□ -0.37
TMEM55B-207ENST00000557041 CCL3L1P16619 93 aa12.76□□□□□ -0.37
TMEM55B-207ENST00000557041 KITLGP21583 273 aa12.76□□□□□ -0.37
TMEM55B-207ENST00000557041 RPP30P78346 268 aaKnown RBP12.76□□□□□ -0.37
TMEM55B-207ENST00000557041 RAB31Q13636 194 aa12.76□□□□□ -0.37
TMEM55B-207ENST00000557041 TMEM241Q24JQ0 296 aa12.76□□□□□ -0.37
TMEM55B-207ENST00000557041 UTF1Q5T230 341 aa12.76□□□□□ -0.37
TMEM55B-207ENST00000557041 IGHV3-21A0A0B4J1V1 117 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 A0A1W2PRD5 423 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 A0A1W2PRF3 423 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 A0A1W2PRM7 423 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 C11orf94C9JXX5 98 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 CLDN34H7C241 214 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 OR7C2O60412 319 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 GLRXP35754 106 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 TIMM23BQ5SRD1 257 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 OR13D1Q8NGV5 346 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 RPH3ALQ9UNE2 315 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 PGPEP1LA6NFU8 196 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 RRHO14718 337 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 PPP1R2P9O14990 202 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 DLX1P56177 255 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 MEF2BQ02080 365 aaPredicted RBP12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 MORN2Q502X0 79 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 MRGPRGQ86SM5 289 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 OR10D4PQ8NGN7 298 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 Q8WTZ3 238 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 SLC35D1Q9NTN3 355 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 ACACBO00763 2458 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 J3QW42 95 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 GATA2P23769 480 aaPredicted RBP12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 CD40P25942 277 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 SERF2P84101 59 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 PRR30Q53SZ7 412 aaPredicted RBP12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 C22orf34Q6ZV56 151 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 PIP4P1Q86T03 277 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 FAM90A1Q86YD7 464 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 ODF3L1Q8IXM7 274 aa12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 RYDENQ9NUL5 291 aaKnown RBP12.75□□□□□ -0.37
TMEM55B-207ENST00000557041 COL12A1Q99715 3063 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 GNB1P62873 340 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 STUMQ69YW2 141 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 ZBTB34Q8NCN2 500 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 TRBV6-6A0A0A6YYG2 114 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 LOC102723971A0A1B0GUV8 181 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 CXCL1P09341 107 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 FABP4P15090 132 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 SRSF7Q16629 238 aaKnown RBP eCLIP12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 BSXQ3C1V8 233 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 SEM1Q6ZVN7 128 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 OR4S2Q8NH73 311 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 NKX6-3A6NJ46 265 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 LYNX1G3V0Z9 82 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 IGKV1D-33P01593 117 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 IGKV1-33P01594 117 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 LYNX1P0DP58 116 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 HOXB1P14653 301 aaPredicted RBP12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 RAB4BP61018 213 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 SLC35E3Q7Z769 313 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 SSX3Q99909 188 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 NPCDR1Q9BY65 106 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 COMMD5Q9GZQ3 224 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 SERTAD4Q9NUC0 356 aa12.74□□□□□ -0.37
TMEM55B-207ENST00000557041 PPP5D1E7EU14 171 aa12.73□□□□□ -0.37
TMEM55B-207ENST00000557041 AP4M1O00189 453 aa12.73□□□□□ -0.37
TMEM55B-207ENST00000557041 NDUFB4O95168 129 aa12.73□□□□□ -0.37
TMEM55B-207ENST00000557041 HPRT1P00492 218 aa12.73□□□□□ -0.37
TMEM55B-207ENST00000557041 DUTP33316 252 aaKnown RBP12.73□□□□□ -0.37
TMEM55B-207ENST00000557041 ZNF134P52741 427 aa12.73□□□□□ -0.37
TMEM55B-207ENST00000557041 FAM3BP58499 235 aaPredicted RBP12.73□□□□□ -0.37
TMEM55B-207ENST00000557041 ZNF726P1Q15940 193 aa12.73□□□□□ -0.37
TMEM55B-207ENST00000557041 ZNF506Q5JVG8 444 aa12.73□□□□□ -0.37
TMEM55B-207ENST00000557041 C5orf30Q96GV9 206 aa12.73□□□□□ -0.37
TMEM55B-207ENST00000557041 EGLN1Q9GZT9 426 aa12.73□□□□□ -0.37
TMEM55B-207ENST00000557041 FAM215AQ9Y5M1 114 aa12.73□□□□□ -0.37
TMEM55B-207ENST00000557041 SRRM5B3KS81 715 aa12.73□□□□□ -0.37
TMEM55B-207ENST00000557041 PLGLAQ15195 96 aa12.73□□□□□ -0.37
TMEM55B-207ENST00000557041 FAM216AQ8WUB2 273 aa12.73□□□□□ -0.37
TMEM55B-207ENST00000557041 LURAP1Q96LR2 239 aa12.73□□□□□ -0.37
TMEM55B-207ENST00000557041 TCF19Q9Y242 345 aa12.73□□□□□ -0.37
TMEM55B-207ENST00000557041 ZNF705GA8MUZ8 300 aaPredicted RBP12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 C1QTNF9BB2RNN3 333 aa12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 RAB29O14966 203 aa12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 TNFRSF1AP19438 455 aa12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 C10orf91Q5T1B1 145 aa12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 ZNF66Q6ZN08 573 aa12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 C1orf162Q8NEQ5 155 aaPredicted RBP12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 SLC25A10Q9UBX3 287 aaPredicted RBP12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 CTXND1A0A1B0GTU2 59 aa12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 COL8A2P25067 703 aa12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 THBS3P49746 956 aa12.72□□□□□ -0.37
TMEM55B-207ENST00000557041 B2MP61769 119 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms