RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 PALMDQ9NP74 551 aa6.09□□□□□ -1.43
TDP1-214ENST00000556063 METTL1Q9UBP6 276 aaKnown RBP6.09□□□□□ -1.43
TDP1-214ENST00000556063 CRYM-AS1A6NIL9 109 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 SLC25A17O43808 307 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 TSPAN9O75954 239 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 NDUFA3O95167 84 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 AKR1C4P17516 323 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 SLC6A1P30531 599 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 CCR6P51684 374 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 F2RL1P55085 397 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 RAG2P55895 527 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 RAB25P57735 213 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 PSG5Q15238 335 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 FOXRED2Q8IWF2 684 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 FAM71E2Q8N5Q1 922 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 Q8N9W7 124 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 DMBX1Q8NFW5 382 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 OR4A5Q8NH83 315 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 MRGPRFQ96AM1 343 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 RHOVQ96L33 236 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 FBXL15Q9H469 300 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 PLSCR3Q9NRY6 295 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 VSIG4Q9Y279 399 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 MXRA5Q9NR99 2828 aa6.08□□□□□ -1.44
TDP1-214ENST00000556063 NIPBLQ6KC79 2804 aaeCLIP6.07□□□□□ -1.44
TDP1-214ENST00000556063 CLPSL1A2RUU4 121 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 AP4M1O00189 453 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 RAMP3O60896 148 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 SNAPC5O75971 98 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 OR2A4O95047 310 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 S1PR2O95136 353 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 CNIH1O95406 144 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 HLA-DRB1P01911 266 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 TCRBP04435 133 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 OR5AC1P0C628 307 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 VAMP1P23763 118 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 UCP1P25874 307 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 CNTFRP26992 372 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 AKR1C2P52895 323 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 BLCAPP62952 87 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 SRSF2Q01130 221 aaKnown RBP6.07□□□□□ -1.44
TDP1-214ENST00000556063 DCTN2Q13561 401 aaKnown RBP6.07□□□□□ -1.44
TDP1-214ENST00000556063 POU2AF1Q16633 256 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 SP6Q3SY56 376 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 PLET1Q6UQ28 207 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 Q6ZSV7 163 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 H2BFWTQ7Z2G1 175 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 SLC35E3Q7Z769 313 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 SLC25A42Q86VD7 318 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 PPP1R27Q86WC6 154 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 ZNF695Q8IW36 515 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 MMD2Q8IY49 270 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 CADM3Q8N126 398 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 LGI3Q8N145 548 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 Q8N2B8 174 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.07□□□□□ -1.44
TDP1-214ENST00000556063 ADAD2Q8NCV1 583 aaKnown RBP6.07□□□□□ -1.44
TDP1-214ENST00000556063 RNASE11Q8TAA1 199 aaKnown RBP6.07□□□□□ -1.44
TDP1-214ENST00000556063 R3HDM4Q96D70 268 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 RRNAD1Q96FB5 475 aaKnown RBP6.07□□□□□ -1.44
TDP1-214ENST00000556063 GALNT14Q96FL9 552 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 RITA1Q96K30 269 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 OR2A7Q96R45 310 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 GON7Q9BXV9 100 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 TMEM222Q9H0R3 208 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 C16orf95Q9H693 158 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 TBC1D24Q9ULP9 559 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 SIGLEC9Q9Y336 463 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 MMP24Q9Y5R2 645 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 NUBP2Q9Y5Y2 271 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 VPS13CQ709C8 3753 aa6.07□□□□□ -1.44
TDP1-214ENST00000556063 TMEM89A2RUT3 159 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 MARCH11A6NNE9 402 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 SRRM4A7MD48 611 aaKnown RBP6.06□□□□□ -1.44
TDP1-214ENST00000556063 ARPC1BO15143 372 aaKnown RBP6.06□□□□□ -1.44
TDP1-214ENST00000556063 CDS2O95674 445 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 KRASP01116 189 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 IGLV2-23P01705 113 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 IGHG2P01859 326 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 AMY1AP04745 511 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 H2AFB2P0C5Z0 115 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 SAA1P0DJI8 122 aaPredicted RBP6.06□□□□□ -1.44
TDP1-214ENST00000556063 VSIG10L2P0DP72 767 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 BTCP35070 178 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 MAS1LP35410 378 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 VDAC2P45880 294 aaPredicted RBP6.06□□□□□ -1.44
TDP1-214ENST00000556063 BRWD1-AS2P59051 145 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 IFITM3Q01628 133 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 TMEM267Q0VDI3 215 aaPredicted RBP6.06□□□□□ -1.44
TDP1-214ENST00000556063 KRTAP24-1Q3LI83 254 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 C4orf46Q504U0 113 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 ZNF585BQ52M93 769 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 FBLN7Q53RD9 439 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 OR4A47Q6IF82 309 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 ZNF562Q6V9R5 426 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 SSX9Q7RTT3 188 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 FAM219AQ8IW50 185 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 COQ8AQ8NI60 647 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 TMEM167AQ8TBQ9 72 aa6.06□□□□□ -1.44
TDP1-214ENST00000556063 ABHD5Q8WTS1 349 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms