RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 CDKN1AP38936 164 aa14.85□□□□□ -0.03
RCCD1-204ENST00000555737 RNPS1Q15287 305 aaKnown RBP14.85□□□□□ -0.03
RCCD1-204ENST00000555737 ATP1A1-AS1Q5TC04 95 aa14.85□□□□□ -0.03
RCCD1-204ENST00000555737 Q6ZR03 302 aa14.85□□□□□ -0.03
RCCD1-204ENST00000555737 CNEP1R1Q8N9A8 125 aa14.85□□□□□ -0.03
RCCD1-204ENST00000555737 RRHO14718 337 aa14.85□□□□□ -0.03
RCCD1-204ENST00000555737 HLA-DRB5Q30154 266 aa14.85□□□□□ -0.03
RCCD1-204ENST00000555737 SPATA31B1PQ5VZV4 182 aa14.85□□□□□ -0.03
RCCD1-204ENST00000555737 TGIF2LYQ8IUE0 185 aa14.85□□□□□ -0.03
RCCD1-204ENST00000555737 CISD2Q8N5K1 135 aaKnown RBP14.85□□□□□ -0.03
RCCD1-204ENST00000555737 ZNF645Q8N7E2 425 aa14.85□□□□□ -0.03
RCCD1-204ENST00000555737 GCM1Q9NP62 436 aa14.85□□□□□ -0.03
RCCD1-204ENST00000555737 PILRBQ9UKJ0 227 aa14.85□□□□□ -0.03
RCCD1-204ENST00000555737 HEATR1Q9H583 2144 aaKnown RBP14.84□□□□□ -0.03
RCCD1-204ENST00000555737 CNOT1A5YKK6 2376 aaKnown RBP14.84□□□□□ -0.03
RCCD1-204ENST00000555737 C17orf112F2Z3M2 114 aa14.84□□□□□ -0.03
RCCD1-204ENST00000555737 OR9G9P0C7N8 305 aa14.84□□□□□ -0.03
RCCD1-204ENST00000555737 BRWD1-AS2P59051 145 aa14.84□□□□□ -0.03
RCCD1-204ENST00000555737 C6orf15Q6UXA7 325 aaPredicted RBP14.84□□□□□ -0.03
RCCD1-204ENST00000555737 TDHQ8IZJ6 230 aa14.84□□□□□ -0.03
RCCD1-204ENST00000555737 OCC1Q8TAD7 63 aa14.84□□□□□ -0.03
RCCD1-204ENST00000555737 RNASEH2CQ8TDP1 164 aaKnown RBP14.84□□□□□ -0.03
RCCD1-204ENST00000555737 PYGO2Q9BRQ0 406 aa14.84□□□□□ -0.03
RCCD1-204ENST00000555737 LAMA5O15230 3695 aa14.84□□□□□ -0.03
RCCD1-204ENST00000555737 TRAV3A0A0B4J244 114 aa14.84□□□□□ -0.03
RCCD1-204ENST00000555737 MPV17P39210 176 aa14.84□□□□□ -0.03
RCCD1-204ENST00000555737 UBE2NP61088 152 aaKnown RBP14.84□□□□□ -0.03
RCCD1-204ENST00000555737 OR13A1Q8NGR1 328 aa14.84□□□□□ -0.03
RCCD1-204ENST00000555737 SFRP2Q96HF1 295 aa14.84□□□□□ -0.03
RCCD1-204ENST00000555737 POLEQ07864 2286 aa14.84□□□□□ -0.03
RCCD1-204ENST00000555737 SMG1Q96Q15 3661 aaKnown RBP14.84□□□□□ -0.03
RCCD1-204ENST00000555737 HPRT1P00492 218 aa14.83□□□□□ -0.03
RCCD1-204ENST00000555737 MBP02144 154 aa14.83□□□□□ -0.03
RCCD1-204ENST00000555737 COX5BP10606 129 aa14.83□□□□□ -0.03
RCCD1-204ENST00000555737 MYOD1P15172 320 aa14.83□□□□□ -0.03
RCCD1-204ENST00000555737 FXYD3Q14802 87 aa14.83□□□□□ -0.03
RCCD1-204ENST00000555737 R3HDM4Q96D70 268 aa14.83□□□□□ -0.03
RCCD1-204ENST00000555737 FAM173AQ9BQD7 235 aa14.83□□□□□ -0.03
RCCD1-204ENST00000555737 POLDIP2Q9Y2S7 368 aa14.83□□□□□ -0.03
RCCD1-204ENST00000555737 TNCP24821 2201 aa14.83□□□□□ -0.04
RCCD1-204ENST00000555737 FCN1O00602 326 aa14.83□□□□□ -0.04
RCCD1-204ENST00000555737 SERF1AO75920 110 aa14.83□□□□□ -0.04
RCCD1-204ENST00000555737 TBC1D28Q2M2D7 210 aa14.83□□□□□ -0.04
RCCD1-204ENST00000555737 TMEM30CPA0ZSE6 113 aa14.83□□□□□ -0.04
RCCD1-204ENST00000555737 GGCTO75223 188 aaKnown RBP14.83□□□□□ -0.04
RCCD1-204ENST00000555737 FOXH1O75593 365 aa14.83□□□□□ -0.04
RCCD1-204ENST00000555737 SRSF7Q16629 238 aaKnown RBP eCLIP14.83□□□□□ -0.04
RCCD1-204ENST00000555737 RPL39P5Q59GN2 51 aa14.83□□□□□ -0.04
RCCD1-204ENST00000555737 AGMATQ9BSE5 352 aa14.83□□□□□ -0.04
RCCD1-204ENST00000555737 M0R1X1 148 aa14.82□□□□□ -0.04
RCCD1-204ENST00000555737 PMCHP20382 165 aa14.82□□□□□ -0.04
RCCD1-204ENST00000555737 ERVFC1-1P60608 527 aa14.82□□□□□ -0.04
RCCD1-204ENST00000555737 ANKRD39Q53RE8 183 aa14.82□□□□□ -0.04
RCCD1-204ENST00000555737 OR4A16Q8NH70 328 aa14.82□□□□□ -0.04
RCCD1-204ENST00000555737 SERTAD4Q9NUC0 356 aa14.82□□□□□ -0.04
RCCD1-204ENST00000555737 IGHEP01854 428 aa14.82□□□□□ -0.04
RCCD1-204ENST00000555737 IRF2P14316 349 aa14.82□□□□□ -0.04
RCCD1-204ENST00000555737 PSG7Q13046 419 aa14.82□□□□□ -0.04
RCCD1-204ENST00000555737 CLDN14O95500 239 aa14.81□□□□□ -0.04
RCCD1-204ENST00000555737 CRISP2P16562 243 aa14.81□□□□□ -0.04
RCCD1-204ENST00000555737 PMS2CLQ68D20 193 aa14.81□□□□□ -0.04
RCCD1-204ENST00000555737 ATOH7Q8N100 152 aa14.81□□□□□ -0.04
RCCD1-204ENST00000555737 OR10G8Q8NGN5 311 aa14.81□□□□□ -0.04
RCCD1-204ENST00000555737 IGHV3OR15-7A0A075B7D8 119 aa14.81□□□□□ -0.04
RCCD1-204ENST00000555737 SRP14P37108 136 aaKnown RBP14.81□□□□□ -0.04
RCCD1-204ENST00000555737 NHLRC2Q8NBF2 726 aa14.81□□□□□ -0.04
RCCD1-204ENST00000555737 TMEM45BQ96B21 275 aa14.81□□□□□ -0.04
RCCD1-204ENST00000555737 BTF3L4Q96K17 158 aa14.81□□□□□ -0.04
RCCD1-204ENST00000555737 NEU1Q99519 415 aa14.81□□□□□ -0.04
RCCD1-204ENST00000555737 MS4A5Q9H3V2 200 aa14.81□□□□□ -0.04
RCCD1-204ENST00000555737 TUBG2Q9NRH3 451 aa14.81□□□□□ -0.04
RCCD1-204ENST00000555737 C15orf62A8K5M9 175 aa14.81□□□□□ -0.04
RCCD1-204ENST00000555737 NPSP0C0P6 89 aa14.81□□□□□ -0.04
RCCD1-204ENST00000555737 GATA2P23769 480 aaPredicted RBP14.81□□□□□ -0.04
RCCD1-204ENST00000555737 CCKARP32238 428 aa14.81□□□□□ -0.04
RCCD1-204ENST00000555737 PXMP4Q9Y6I8 212 aa14.81□□□□□ -0.04
RCCD1-204ENST00000555737 PMS2P5A8MQ11 134 aa14.8□□□□□ -0.04
RCCD1-204ENST00000555737 SNURFLB1AK76 121 aa14.8□□□□□ -0.04
RCCD1-204ENST00000555737 GPR12P47775 334 aa14.8□□□□□ -0.04
RCCD1-204ENST00000555737 MEOX1P50221 254 aa14.8□□□□□ -0.04
RCCD1-204ENST00000555737 BPIFB3P59826 476 aa14.8□□□□□ -0.04
RCCD1-204ENST00000555737 RPL31P62899 125 aaKnown RBP14.8□□□□□ -0.04
RCCD1-204ENST00000555737 MOB1BQ7L9L4 216 aa14.8□□□□□ -0.04
RCCD1-204ENST00000555737 OR4P4Q8NGL7 312 aa14.8□□□□□ -0.04
RCCD1-204ENST00000555737 MRPL18Q9H0U6 180 aaKnown RBP14.8□□□□□ -0.04
RCCD1-204ENST00000555737 SEPSECSQ9HD40 501 aaKnown RBP14.8□□□□□ -0.04
RCCD1-204ENST00000555737 Q6ZWC4 215 aa14.8□□□□□ -0.04
RCCD1-204ENST00000555737 DOLPP1Q86YN1 238 aa14.8□□□□□ -0.04
RCCD1-204ENST00000555737 OR8I2Q8N0Y5 310 aa14.8□□□□□ -0.04
RCCD1-204ENST00000555737 OR1L6Q8NGR2 347 aa14.8□□□□□ -0.04
RCCD1-204ENST00000555737 PKIBQ9C010 78 aa14.8□□□□□ -0.04
RCCD1-204ENST00000555737 ELOVL5Q9NYP7 299 aa14.8□□□□□ -0.04
RCCD1-204ENST00000555737 DUSP13Q9UII6 198 aa14.8□□□□□ -0.04
RCCD1-204ENST00000555737 SPTBN2O15020 2390 aa14.8□□□□□ -0.04
RCCD1-204ENST00000555737 TIMM8AO60220 97 aaPredicted RBP14.79□□□□□ -0.04
RCCD1-204ENST00000555737 NTF3P20783 257 aa14.79□□□□□ -0.04
RCCD1-204ENST00000555737 LINC00596Q86U02 117 aa14.79□□□□□ -0.04
RCCD1-204ENST00000555737 COQ2Q96H96 371 aa14.79□□□□□ -0.04
RCCD1-204ENST00000555737 FOXJ2Q9P0K8 574 aa14.79□□□□□ -0.04
RCCD1-204ENST00000555737 YTHDF2Q9Y5A9 579 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms