RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 S1PR2O95136 353 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 LTAP01374 205 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 IFNA1P01562 189 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 P0C880 135 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 CTSEP14091 401 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 ORM2P19652 201 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 SERPINB1P30740 379 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 ALDH3A1P30838 453 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 CTBP2P56545 445 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 GNG3P63215 75 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 FABP5Q01469 135 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 DEFA6Q01524 100 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 JOSD1Q15040 202 aaPredicted RBP2.69□□□□□ -1.98
VRK1-205ENST00000555402 TSNQ15631 228 aaKnown RBP2.69□□□□□ -1.98
VRK1-205ENST00000555402 TAF9Q16594 264 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 EBLN2Q6P2I7 272 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 WDR59Q6PJI9 974 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 SMIM20Q8N5G0 67 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 DEFB125Q8N687 156 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 TMEM75Q8N9X5 138 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 OR4X1Q8NH49 305 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 MCFD2Q8NI22 146 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 ZHX1-C8orf76Q96EF9 292 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 LINC00527Q9UJ94 153 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 NDUFAF1Q9Y375 327 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 WASHC3Q9Y3C0 194 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 MTUS2Q5JR59 1369 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 DHX57Q6P158 1386 aaKnown RBP2.69□□□□□ -1.98
VRK1-205ENST00000555402 THSD7AQ9UPZ6 1657 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 NAV1Q8NEY1 1877 aa2.69□□□□□ -1.98
VRK1-205ENST00000555402 IGKV1D-37A0A075B6S9 117 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 TRAV8-1A0A0A6YYK1 113 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 OR4C46A6NHA9 309 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 BHLHE40O14503 412 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 CRABP1P29762 137 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 PSMB3P49720 205 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 FAM201AQ5SY85 155 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 C10orf91Q5T1B1 145 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 HES3Q5TGS1 186 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 LPCAT3Q6P1A2 487 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 OR51A2Q8NGJ7 313 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 OR2T4Q8NH00 348 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 OR51H1Q8NH63 302 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 OR13C6PQ8NH95 151 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 LHFPL5Q8TAF8 219 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 MUC7Q8TAX7 377 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 BORCS7Q96B45 105 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 PPP1R2P1Q96PQ5 205 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 PKMYT1Q99640 499 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 HIGD2AQ9BW72 106 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 BOLA2Q9H3K6 86 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 ZNF286AQ9HBT8 521 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 BIN3Q9NQY0 253 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 PCYT1BQ9Y5K3 369 aaPredicted RBP2.68□□□□□ -1.98
VRK1-205ENST00000555402 YLPM1P49750 1951 aaKnown RBP2.68□□□□□ -1.98
VRK1-205ENST00000555402 CACNA1DQ01668 2161 aa2.68□□□□□ -1.98
VRK1-205ENST00000555402 HECW2Q9P2P5 1572 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 NUP155O75694 1391 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 IGHV3OR15-7A0A075B7D8 119 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 A0A1B0GV50 99 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 EXOC1LA0A1B0GW35 172 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 FAAHO00519 579 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 MRASO14807 208 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 PDE6DO43924 150 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 TTRP02766 147 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 HMGN1P05114 100 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 CRHP06850 196 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 CRYGDP07320 174 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 FAM228BP0C875 321 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 CCL1P22362 96 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 HIST1H1TP22492 207 aaPredicted RBP2.67□□□□□ -1.98
VRK1-205ENST00000555402 COL8A2P25067 703 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 HSPA9P38646 679 aaKnown RBP2.67□□□□□ -1.98
VRK1-205ENST00000555402 C1orf194Q5T5A4 169 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 TEX36Q5VZQ5 186 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 LY6G5BQ8NDX9 201 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 OR10K1Q8NGX5 313 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 GINS3Q9BRX5 216 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 ULBP3Q9BZM4 244 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 GTSF1LQ9H1H1 148 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 MED28Q9H204 178 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 CMTM6Q9NX76 183 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 UTP11Q9Y3A2 253 aaKnown RBP2.67□□□□□ -1.98
VRK1-205ENST00000555402 LINC00588Q9Y4M8 146 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 ITGB4P16144 1822 aa2.67□□□□□ -1.98
VRK1-205ENST00000555402 CEP170Q5SW79 1584 aa2.66□□□□□ -1.98
VRK1-205ENST00000555402 FAM236DA0A1B0GTK5 79 aa2.66□□□□□ -1.98
VRK1-205ENST00000555402 PPP5D1E7EU14 171 aa2.66□□□□□ -1.98
VRK1-205ENST00000555402 TSTD3H0UI37 97 aa2.66□□□□□ -1.98
VRK1-205ENST00000555402 LECT2O14960 151 aa2.66□□□□□ -1.98
VRK1-205ENST00000555402 SLC25A20O43772 301 aa2.66□□□□□ -1.98
VRK1-205ENST00000555402 OPN1SWP03999 348 aa2.66□□□□□ -1.98
VRK1-205ENST00000555402 FAM236CP0DP71 79 aa2.66□□□□□ -1.98
VRK1-205ENST00000555402 TCTAP57738 103 aa2.66□□□□□ -1.98
VRK1-205ENST00000555402 HERVK_113P63121 156 aa2.66□□□□□ -1.98
VRK1-205ENST00000555402 CST6Q15828 149 aa2.66□□□□□ -1.98
VRK1-205ENST00000555402 NOXRED1Q6NXP6 359 aa2.66□□□□□ -1.98
VRK1-205ENST00000555402 C5orf46Q6UWT4 87 aa2.66□□□□□ -1.98
VRK1-205ENST00000555402 LYPD6Q86Y78 171 aa2.66□□□□□ -1.98
VRK1-205ENST00000555402 YIPF7Q8N8F6 280 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms