RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 SPRR3Q9UBC9 169 aa13.82□□□□□ -0.2
XRCC3-209ENST00000554913 GCH1P30793 250 aa13.81□□□□□ -0.2
XRCC3-209ENST00000554913 GABRA6Q16445 453 aa13.81□□□□□ -0.2
XRCC3-209ENST00000554913 IQCJQ1A5X6 159 aa13.81□□□□□ -0.2
XRCC3-209ENST00000554913 PRAMEF6Q5VXH4 476 aa13.81□□□□□ -0.2
XRCC3-209ENST00000554913 SGMS2Q8NHU3 365 aa13.81□□□□□ -0.2
XRCC3-209ENST00000554913 R3HDM4Q96D70 268 aa13.81□□□□□ -0.2
XRCC3-209ENST00000554913 ZPBPQ9BS86 351 aa13.81□□□□□ -0.2
XRCC3-209ENST00000554913 PXMP4Q9Y6I8 212 aa13.81□□□□□ -0.2
XRCC3-209ENST00000554913 J3QW42 95 aa13.81□□□□□ -0.2
XRCC3-209ENST00000554913 SCGB1D1O95968 90 aa13.81□□□□□ -0.2
XRCC3-209ENST00000554913 UBE2NP61088 152 aaKnown RBP13.81□□□□□ -0.2
XRCC3-209ENST00000554913 FOXF2Q12947 444 aa13.81□□□□□ -0.2
XRCC3-209ENST00000554913 RNFT1Q5M7Z0 435 aa13.81□□□□□ -0.2
XRCC3-209ENST00000554913 KCNIP2Q9NS61 270 aa13.81□□□□□ -0.2
XRCC3-209ENST00000554913 FKBP11Q9NYL4 201 aa13.81□□□□□ -0.2
XRCC3-209ENST00000554913 TMEM210A6NLX4 147 aa13.8□□□□□ -0.2
XRCC3-209ENST00000554913 CD99P14209 185 aa13.8□□□□□ -0.2
XRCC3-209ENST00000554913 HNF1AP20823 631 aa13.8□□□□□ -0.2
XRCC3-209ENST00000554913 IGHV1-2P23083 117 aa13.8□□□□□ -0.2
XRCC3-209ENST00000554913 COL8A2P25067 703 aa13.8□□□□□ -0.2
XRCC3-209ENST00000554913 ACP7Q6ZNF0 438 aa13.8□□□□□ -0.2
XRCC3-209ENST00000554913 PROP1O75360 226 aa13.8□□□□□ -0.2
XRCC3-209ENST00000554913 ARL14EPLP0DKL9 152 aa13.8□□□□□ -0.2
XRCC3-209ENST00000554913 SFRP2Q96HF1 295 aa13.8□□□□□ -0.2
XRCC3-209ENST00000554913 HSD17B10Q99714 261 aaKnown RBP13.8□□□□□ -0.2
XRCC3-209ENST00000554913 ATG101Q9BSB4 218 aa13.8□□□□□ -0.2
XRCC3-209ENST00000554913 ELOVL5Q9NYP7 299 aa13.8□□□□□ -0.2
XRCC3-209ENST00000554913 IL17BQ9UHF5 180 aa13.8□□□□□ -0.2
XRCC3-209ENST00000554913 HCFC1P51610 2035 aa13.79□□□□□ -0.2
XRCC3-209ENST00000554913 RRHO14718 337 aa13.79□□□□□ -0.2
XRCC3-209ENST00000554913 FOXL1Q12952 345 aa13.79□□□□□ -0.2
XRCC3-209ENST00000554913 GCNT2Q8N0V5 402 aa13.79□□□□□ -0.2
XRCC3-209ENST00000554913 TCTEX1D1Q8N7M0 179 aa13.79□□□□□ -0.2
XRCC3-209ENST00000554913 RAB1CQ92928 201 aa13.79□□□□□ -0.2
XRCC3-209ENST00000554913 FZR1Q9UM11 496 aa13.79□□□□□ -0.2
XRCC3-209ENST00000554913 KLF13Q9Y2Y9 288 aaPredicted RBP13.79□□□□□ -0.2
XRCC3-209ENST00000554913 KLRC4-KLRK1H3BQV0 150 aa13.79□□□□□ -0.2
XRCC3-209ENST00000554913 TCAPO15273 167 aa13.79□□□□□ -0.2
XRCC3-209ENST00000554913 FCGR3BO75015 233 aa13.79□□□□□ -0.2
XRCC3-209ENST00000554913 MIC13Q5XKP0 118 aa13.79□□□□□ -0.2
XRCC3-209ENST00000554913 TREML4Q6UXN2 200 aa13.79□□□□□ -0.2
XRCC3-209ENST00000554913 VKORC1L1Q8N0U8 176 aa13.79□□□□□ -0.2
XRCC3-209ENST00000554913 MDS2Q8NDY4 140 aa13.79□□□□□ -0.2
XRCC3-209ENST00000554913 FAM234AQ9H0X4 552 aa13.79□□□□□ -0.2
XRCC3-209ENST00000554913 CBLN4Q9NTU7 201 aa13.79□□□□□ -0.2
XRCC3-209ENST00000554913 POLR3KQ9Y2Y1 108 aaPredicted RBP13.79□□□□□ -0.2
XRCC3-209ENST00000554913 SCO2A0A1W2PP80 73 aa13.78□□□□□ -0.2
XRCC3-209ENST00000554913 F6UZH7 168 aa13.78□□□□□ -0.2
XRCC3-209ENST00000554913 WISP2O76076 250 aa13.78□□□□□ -0.2
XRCC3-209ENST00000554913 SOX8P57073 446 aa13.78□□□□□ -0.2
XRCC3-209ENST00000554913 SPCS3P61009 180 aa13.78□□□□□ -0.2
XRCC3-209ENST00000554913 NUTF2P61970 127 aaKnown RBP13.78□□□□□ -0.2
XRCC3-209ENST00000554913 TMEM249Q2WGJ8 235 aa13.78□□□□□ -0.2
XRCC3-209ENST00000554913 WDR82Q6UXN9 313 aa13.78□□□□□ -0.2
XRCC3-209ENST00000554913 SNHG12Q9BXW3 62 aa13.78□□□□□ -0.2
XRCC3-209ENST00000554913 PTPRBP23467 1997 aa13.78□□□□□ -0.2
XRCC3-209ENST00000554913 GRIFINA4D1Z8 144 aa13.78□□□□□ -0.2
XRCC3-209ENST00000554913 CD33P20138 364 aa13.78□□□□□ -0.2
XRCC3-209ENST00000554913 ADMP35318 185 aa13.78□□□□□ -0.2
XRCC3-209ENST00000554913 RAB4BP61018 213 aa13.78□□□□□ -0.2
XRCC3-209ENST00000554913 TRIP6Q15654 476 aaKnown RBP13.78□□□□□ -0.2
XRCC3-209ENST00000554913 Q8TCH9 128 aa13.78□□□□□ -0.2
XRCC3-209ENST00000554913 MGST2Q99735 147 aa13.78□□□□□ -0.2
XRCC3-209ENST00000554913 MS4A5Q9H3V2 200 aa13.78□□□□□ -0.2
XRCC3-209ENST00000554913 LOC400499M0QZD8 3231 aa13.77□□□□□ -0.2
XRCC3-209ENST00000554913 TRGV5A0A0B4J1U4 118 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 MDFIC2A0A1B0GVS7 189 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 AQP7O14520 342 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 SOX15O60248 233 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 AGFG2O95081 481 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 IGHV3-13P01766 116 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 IGHV3-7P01780 117 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 THBS3P49746 956 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 EDDM3AQ14507 147 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 ZNF124Q15973 351 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 OCC1Q8TAD7 63 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 MS4A10Q96PG2 267 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 IMMP2LQ96T52 175 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 NEU1Q99519 415 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 MSL2Q9HCI7 577 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 DUTP33316 252 aaKnown RBP13.77□□□□□ -0.21
XRCC3-209ENST00000554913 ARG2P78540 354 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 PRAMEF5Q5TYX0 476 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 ABHD12Q8N2K0 398 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 PRR7Q8TB68 274 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 HEYLQ9NQ87 328 aaPredicted RBP13.77□□□□□ -0.21
XRCC3-209ENST00000554913 NAGKQ9UJ70 344 aa13.77□□□□□ -0.21
XRCC3-209ENST00000554913 CACNA1HO95180 2353 aa13.76□□□□□ -0.21
XRCC3-209ENST00000554913 TRAV3A0A0B4J244 114 aa13.76□□□□□ -0.21
XRCC3-209ENST00000554913 C15orf65H3BRN8 121 aa13.76□□□□□ -0.21
XRCC3-209ENST00000554913 STAG3L2P0CL84 134 aa13.76□□□□□ -0.21
XRCC3-209ENST00000554913 STAG3L3P0CL85 134 aa13.76□□□□□ -0.21
XRCC3-209ENST00000554913 FOSL1P15407 271 aa13.76□□□□□ -0.21
XRCC3-209ENST00000554913 KITLGP21583 273 aa13.76□□□□□ -0.21
XRCC3-209ENST00000554913 OPRK1P41145 380 aa13.76□□□□□ -0.21
XRCC3-209ENST00000554913 TGFBR3Q03167 851 aa13.76□□□□□ -0.21
XRCC3-209ENST00000554913 PDLIM3Q53GG5 364 aaPredicted RBP13.76□□□□□ -0.21
XRCC3-209ENST00000554913 GGTLC1Q9BX51 225 aa13.76□□□□□ -0.21
XRCC3-209ENST00000554913 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms